RNA–Protein interactions for RNA: ENST00000516080.1

RNU4-49P-201, Transcript of RNA, U4 small nuclear 49, pseudogene, humanhuman

BASIC

Gene RNU4-49P, Length 140 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-49P-201ENST00000516080 ZNF594Q96JF6 807 aaPredicted RBP6.51□□□□□ -1.37
RNU4-49P-201ENST00000516080 BTBD6Q96KE9 485 aa6.51□□□□□ -1.37
RNU4-49P-201ENST00000516080 CALR3Q96L12 384 aaKnown RBP6.51□□□□□ -1.37
RNU4-49P-201ENST00000516080 TSPAN10Q9H1Z9 355 aaPredicted RBP6.51□□□□□ -1.37
RNU4-49P-201ENST00000516080 MAFBQ9Y5Q3 323 aaPredicted RBP6.51□□□□□ -1.37
RNU4-49P-201ENST00000516080 ZNF468Q5VIY5 522 aaPredicted RBP6.5□□□□□ -1.37
RNU4-49P-201ENST00000516080 LRRC69Q6ZNQ3 347 aa6.5□□□□□ -1.37
RNU4-49P-201ENST00000516080 RHPN1Q8TCX5 695 aa6.5□□□□□ -1.37
RNU4-49P-201ENST00000516080 C7orf43Q8WVR3 580 aa6.5□□□□□ -1.37
RNU4-49P-201ENST00000516080 ANKIB1Q9P2G1 1089 aa6.5□□□□□ -1.37
RNU4-49P-201ENST00000516080 SFI1A8K8P3 1242 aa6.49□□□□□ -1.37
RNU4-49P-201ENST00000516080 SEC13P55735 322 aa6.49□□□□□ -1.37
RNU4-49P-201ENST00000516080 LARP1Q6PKG0 1096 aaKnown RBP6.49□□□□□ -1.37
RNU4-49P-201ENST00000516080 POTEAQ6S8J7 498 aa6.49□□□□□ -1.37
RNU4-49P-201ENST00000516080 TSEN2Q8NCE0 465 aaKnown RBP6.49□□□□□ -1.37
RNU4-49P-201ENST00000516080 GAS2L2Q8NHY3 880 aa6.49□□□□□ -1.37
RNU4-49P-201ENST00000516080 PPP1R12CQ9BZL4 782 aa6.49□□□□□ -1.37
RNU4-49P-201ENST00000516080 HCN2Q9UL51 889 aa6.49□□□□□ -1.37
RNU4-49P-201ENST00000516080 GNB5O14775 395 aa6.48□□□□□ -1.37
RNU4-49P-201ENST00000516080 PPP1R12BO60237 982 aaPredicted RBP6.48□□□□□ -1.37
RNU4-49P-201ENST00000516080 DKK1O94907 266 aa6.48□□□□□ -1.37
RNU4-49P-201ENST00000516080 PLA2G4EQ3MJ16 856 aa6.48□□□□□ -1.37
RNU4-49P-201ENST00000516080 SH3PXD2AQ5TCZ1 1133 aa6.48□□□□□ -1.37
RNU4-49P-201ENST00000516080 LINC00114Q6XXX2 140 aa6.48□□□□□ -1.37
RNU4-49P-201ENST00000516080 STAG2Q8N3U4 1231 aa6.48□□□□□ -1.37
RNU4-49P-201ENST00000516080 STRN4Q9NRL3 753 aa6.48□□□□□ -1.37
RNU4-49P-201ENST00000516080 KLF15Q9UIH9 416 aa6.48□□□□□ -1.37
RNU4-49P-201ENST00000516080 ATAD2Q6PL18 1390 aa6.47□□□□□ -1.37
RNU4-49P-201ENST00000516080 MSTNO14793 375 aa6.47□□□□□ -1.37
RNU4-49P-201ENST00000516080 HOXB4P17483 251 aaPredicted RBP6.47□□□□□ -1.37
RNU4-49P-201ENST00000516080 PCBP4P57723 403 aaKnown RBP6.47□□□□□ -1.37
RNU4-49P-201ENST00000516080 FCHSD1Q86WN1 690 aa6.47□□□□□ -1.37
RNU4-49P-201ENST00000516080 PHACTR1Q9C0D0 580 aa6.47□□□□□ -1.37
RNU4-49P-201ENST00000516080 HCN4Q9Y3Q4 1203 aa6.47□□□□□ -1.37
RNU4-49P-201ENST00000516080 DGKGP49619 791 aa6.46□□□□□ -1.38
RNU4-49P-201ENST00000516080 NEUROD1Q13562 356 aa6.46□□□□□ -1.38
RNU4-49P-201ENST00000516080 HIF1AQ16665 826 aa6.46□□□□□ -1.38
RNU4-49P-201ENST00000516080 CHSY3Q70JA7 882 aa6.46□□□□□ -1.38
RNU4-49P-201ENST00000516080 NOP53Q9NZM5 478 aaKnown RBP6.46□□□□□ -1.38
RNU4-49P-201ENST00000516080 C21orf2O43822 256 aa6.45□□□□□ -1.38
RNU4-49P-201ENST00000516080 ALAS2P22557 587 aa6.45□□□□□ -1.38
RNU4-49P-201ENST00000516080 PTK7Q13308 1070 aa6.45□□□□□ -1.38
RNU4-49P-201ENST00000516080 SUZ12Q15022 739 aaKnown RBP6.45□□□□□ -1.38
RNU4-49P-201ENST00000516080 KANK4Q5T7N3 995 aaPredicted RBP6.45□□□□□ -1.38
RNU4-49P-201ENST00000516080 SYT9Q86SS6 491 aa6.45□□□□□ -1.38
RNU4-49P-201ENST00000516080 SCG3Q8WXD2 468 aaKnown RBP6.45□□□□□ -1.38
RNU4-49P-201ENST00000516080 CEP63Q96MT8 703 aa6.45□□□□□ -1.38
RNU4-49P-201ENST00000516080 HINFPQ9BQA5 517 aa6.45□□□□□ -1.38
RNU4-49P-201ENST00000516080 C2orf49Q9BVC5 232 aaPredicted RBP6.45□□□□□ -1.38
RNU4-49P-201ENST00000516080 VRTNQ9H8Y1 702 aa6.45□□□□□ -1.38
RNU4-49P-201ENST00000516080 ELOA3CA0A087WX78 387 aaPredicted RBP6.44□□□□□ -1.38
RNU4-49P-201ENST00000516080 ELOA3DA6NLF2 546 aaPredicted RBP6.44□□□□□ -1.38
RNU4-49P-201ENST00000516080 FAM196BA6NMK8 535 aa6.44□□□□□ -1.38
RNU4-49P-201ENST00000516080 SIN3BO75182 1162 aa6.44□□□□□ -1.38
RNU4-49P-201ENST00000516080 COL8A1P27658 744 aa6.44□□□□□ -1.38
RNU4-49P-201ENST00000516080 LMOD1P29536 600 aaPredicted RBP6.44□□□□□ -1.38
RNU4-49P-201ENST00000516080 SFSWAPQ12872 951 aaKnown RBP6.44□□□□□ -1.38
RNU4-49P-201ENST00000516080 DPYDQ12882 1025 aa6.44□□□□□ -1.38
RNU4-49P-201ENST00000516080 GRIN2CQ14957 1233 aa6.44□□□□□ -1.38
RNU4-49P-201ENST00000516080 ELOA3BQ3SY89 546 aa6.44□□□□□ -1.38
RNU4-49P-201ENST00000516080 CRTC2Q53ET0 693 aaPredicted RBP6.44□□□□□ -1.38
RNU4-49P-201ENST00000516080 ALDH16A1Q8IZ83 802 aa6.44□□□□□ -1.38
RNU4-49P-201ENST00000516080 ELOA3Q8NG57 546 aa6.44□□□□□ -1.38
RNU4-49P-201ENST00000516080 SUSD3Q96L08 255 aa6.44□□□□□ -1.38
RNU4-49P-201ENST00000516080 SPOCK3Q9BQ16 436 aa6.44□□□□□ -1.38
RNU4-49P-201ENST00000516080 BRD7Q9NPI1 651 aa6.44□□□□□ -1.38
RNU4-49P-201ENST00000516080 KRBA1A5PL33 1030 aa6.43□□□□□ -1.38
RNU4-49P-201ENST00000516080 USP17L15C9J2P7 530 aa6.43□□□□□ -1.38
RNU4-49P-201ENST00000516080 USP17L10C9JJH3 530 aa6.43□□□□□ -1.38
RNU4-49P-201ENST00000516080 USP17L13C9JLJ4 530 aa6.43□□□□□ -1.38
RNU4-49P-201ENST00000516080 USP17L12C9JPN9 530 aa6.43□□□□□ -1.38
RNU4-49P-201ENST00000516080 USP17L11C9JVI0 530 aa6.43□□□□□ -1.38
RNU4-49P-201ENST00000516080 USP17L21D6R901 530 aa6.43□□□□□ -1.38
RNU4-49P-201ENST00000516080 USP17L18D6R9N7 530 aa6.43□□□□□ -1.38
RNU4-49P-201ENST00000516080 USP17L22D6RA61 530 aa6.43□□□□□ -1.38
RNU4-49P-201ENST00000516080 USP17L17D6RBQ6 530 aa6.43□□□□□ -1.38
RNU4-49P-201ENST00000516080 USP17L19D6RCP7 530 aa6.43□□□□□ -1.38
RNU4-49P-201ENST00000516080 USP17L20D6RJB6 530 aa6.43□□□□□ -1.38
RNU4-49P-201ENST00000516080 KCNQ4P56696 695 aa6.43□□□□□ -1.38
RNU4-49P-201ENST00000516080 SPEM2Q0P670 501 aa6.43□□□□□ -1.38
RNU4-49P-201ENST00000516080 USP17L24Q0WX57 530 aa6.43□□□□□ -1.38
RNU4-49P-201ENST00000516080 ANKMY2Q8IV38 441 aa6.43□□□□□ -1.38
RNU4-49P-201ENST00000516080 CHMP7Q8WUX9 453 aaPredicted RBP6.43□□□□□ -1.38
RNU4-49P-201ENST00000516080 HSH2DQ96JZ2 352 aa6.43□□□□□ -1.38
RNU4-49P-201ENST00000516080 KCNH4Q9UQ05 1017 aa6.43□□□□□ -1.38
RNU4-49P-201ENST00000516080 ADARB2-AS1A8MUL3 147 aa6.42□□□□□ -1.38
RNU4-49P-201ENST00000516080 ITGB2P05107 769 aa6.42□□□□□ -1.38
RNU4-49P-201ENST00000516080 IGFBP4P22692 258 aa6.42□□□□□ -1.38
RNU4-49P-201ENST00000516080 TYRO3Q06418 890 aa6.42□□□□□ -1.38
RNU4-49P-201ENST00000516080 ZNF280CQ8ND82 737 aa6.42□□□□□ -1.38
RNU4-49P-201ENST00000516080 SLC30A3Q99726 388 aa6.42□□□□□ -1.38
RNU4-49P-201ENST00000516080 SUV39H2Q9H5I1 410 aa6.42□□□□□ -1.38
RNU4-49P-201ENST00000516080 PROCP04070 461 aa6.41□□□□□ -1.38
RNU4-49P-201ENST00000516080 RTN1Q16799 776 aa6.41□□□□□ -1.38
RNU4-49P-201ENST00000516080 TNFRSF25Q93038 417 aa6.41□□□□□ -1.38
RNU4-49P-201ENST00000516080 NGLY1Q96IV0 654 aa6.41□□□□□ -1.38
RNU4-49P-201ENST00000516080 MDFIQ99750 246 aa6.41□□□□□ -1.38
RNU4-49P-201ENST00000516080 IER5Q5VY09 327 aa6.4□□□□□ -1.38
RNU4-49P-201ENST00000516080 BTLAQ7Z6A9 289 aa6.4□□□□□ -1.38
RNU4-49P-201ENST00000516080 EFCC1Q9HA90 598 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms