RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 EIF2S2P20042 333 aaKnown RBP12.65□□□□□ -0.38
RNF4-221ENST00000513643 DUSP27Q5VZP5 1158 aa12.65□□□□□ -0.38
RNF4-221ENST00000513643 BICDL1Q6ZP65 573 aa12.65□□□□□ -0.38
RNF4-221ENST00000513643 NPM2Q86SE8 214 aaKnown RBP12.65□□□□□ -0.38
RNF4-221ENST00000513643 WDR63Q8IWG1 891 aa12.65□□□□□ -0.38
RNF4-221ENST00000513643 ZNF34Q8IZ26 560 aa12.65□□□□□ -0.38
RNF4-221ENST00000513643 NGEFQ8N5V2 710 aa12.65□□□□□ -0.38
RNF4-221ENST00000513643 C8orf58Q8NAV2 365 aa12.65□□□□□ -0.38
RNF4-221ENST00000513643 ZNF652Q9Y2D9 606 aa12.65□□□□□ -0.38
RNF4-221ENST00000513643 LAS1LQ9Y4W2 734 aaKnown RBP12.65□□□□□ -0.38
RNF4-221ENST00000513643 ZNF521Q96K83 1311 aa12.64□□□□□ -0.39
RNF4-221ENST00000513643 ATP10DQ9P241 1426 aa12.64□□□□□ -0.39
RNF4-221ENST00000513643 CCER2I3L3R5 266 aa12.64□□□□□ -0.39
RNF4-221ENST00000513643 MYL6BP14649 208 aa12.64□□□□□ -0.39
RNF4-221ENST00000513643 CHRNA5P30532 468 aa12.64□□□□□ -0.39
RNF4-221ENST00000513643 GIGYF2Q6Y7W6 1299 aaKnown RBP12.64□□□□□ -0.39
RNF4-221ENST00000513643 ANXA1P04083 346 aa12.63□□□□□ -0.39
RNF4-221ENST00000513643 COPS6Q7L5N1 327 aa12.63□□□□□ -0.39
RNF4-221ENST00000513643 PIM2Q9P1W9 311 aa12.63□□□□□ -0.39
RNF4-221ENST00000513643 PDZRN3Q9UPQ7 1066 aa12.63□□□□□ -0.39
RNF4-221ENST00000513643 BRCA1P38398 1863 aaKnown RBP12.63□□□□□ -0.39
RNF4-221ENST00000513643 IBTKQ9P2D0 1353 aaPredicted RBP12.62□□□□□ -0.39
RNF4-221ENST00000513643 YY1P25490 414 aa12.62□□□□□ -0.39
RNF4-221ENST00000513643 HDGFL1Q5TGJ6 251 aa12.62□□□□□ -0.39
RNF4-221ENST00000513643 TSPYL6Q8N831 410 aa12.62□□□□□ -0.39
RNF4-221ENST00000513643 CHPF2Q9P2E5 772 aa12.62□□□□□ -0.39
RNF4-221ENST00000513643 DBF4Q9UBU7 674 aaPredicted RBP12.62□□□□□ -0.39
RNF4-221ENST00000513643 NIP7Q9Y221 180 aaKnown RBP eCLIP12.62□□□□□ -0.39
RNF4-221ENST00000513643 UBN2Q6ZU65 1347 aa12.62□□□□□ -0.39
RNF4-221ENST00000513643 N4BP2Q86UW6 1770 aaPredicted RBP12.61□□□□□ -0.39
RNF4-221ENST00000513643 PDE6BP35913 854 aa12.61□□□□□ -0.39
RNF4-221ENST00000513643 TPTE2Q6XPS3 522 aa12.61□□□□□ -0.39
RNF4-221ENST00000513643 KIF6Q6ZMV9 814 aa12.61□□□□□ -0.39
RNF4-221ENST00000513643 FAM9BQ8IZU0 186 aa12.61□□□□□ -0.39
RNF4-221ENST00000513643 CNBD1Q8NA66 436 aa12.61□□□□□ -0.39
RNF4-221ENST00000513643 XAGE3Q8WTP9 111 aa12.61□□□□□ -0.39
RNF4-221ENST00000513643 SPINK5Q9NQ38 1064 aaPredicted RBP12.61□□□□□ -0.39
RNF4-221ENST00000513643 SENP3-EIF4A1A0A087X0R7 540 aa12.6□□□□□ -0.39
RNF4-221ENST00000513643 SRGNP10124 158 aa12.6□□□□□ -0.39
RNF4-221ENST00000513643 DALRD3Q5D0E6 543 aaKnown RBP12.6□□□□□ -0.39
RNF4-221ENST00000513643 NBPF5PQ86XG9 351 aaPredicted RBP12.6□□□□□ -0.39
RNF4-221ENST00000513643 PELP1Q8IZL8 1130 aaKnown RBP12.6□□□□□ -0.39
RNF4-221ENST00000513643 NECTIN2Q92692 538 aa12.6□□□□□ -0.39
RNF4-221ENST00000513643 TSR2Q969E8 191 aaKnown RBP12.6□□□□□ -0.39
RNF4-221ENST00000513643 ZBTB3Q9H5J0 574 aa12.6□□□□□ -0.39
RNF4-221ENST00000513643 HYPKQ9NX55 129 aa12.6□□□□□ -0.39
RNF4-221ENST00000513643 ANKRD31Q8N7Z5 1873 aa12.59□□□□□ -0.39
RNF4-221ENST00000513643 ADCY9O60503 1353 aa12.59□□□□□ -0.39
RNF4-221ENST00000513643 CHD4Q14839 1912 aa12.59□□□□□ -0.39
RNF4-221ENST00000513643 H0YIN7 160 aa12.59□□□□□ -0.39
RNF4-221ENST00000513643 TCIRG1Q13488 830 aa12.59□□□□□ -0.39
RNF4-221ENST00000513643 CRY2Q49AN0 593 aa12.59□□□□□ -0.39
RNF4-221ENST00000513643 SLC10A5Q5PT55 438 aa12.59□□□□□ -0.39
RNF4-221ENST00000513643 SUSD4Q5VX71 490 aa12.59□□□□□ -0.39
RNF4-221ENST00000513643 C2CD5Q86YS7 1000 aa12.59□□□□□ -0.39
RNF4-221ENST00000513643 CCDC24Q8N4L8 307 aa12.59□□□□□ -0.39
RNF4-221ENST00000513643 PLBD2Q8NHP8 589 aa12.59□□□□□ -0.39
RNF4-221ENST00000513643 WWC3Q9ULE0 1092 aa12.59□□□□□ -0.39
RNF4-221ENST00000513643 BCS1LQ9Y276 419 aa12.59□□□□□ -0.39
RNF4-221ENST00000513643 RIC1Q4ADV7 1423 aa12.59□□□□□ -0.39
RNF4-221ENST00000513643 NUP98P52948 1817 aa12.58□□□□□ -0.4
RNF4-221ENST00000513643 ELL2O00472 640 aaPredicted RBP12.58□□□□□ -0.4
RNF4-221ENST00000513643 NTSR2O95665 410 aa12.58□□□□□ -0.4
RNF4-221ENST00000513643 ST5P78524 1137 aa12.58□□□□□ -0.4
RNF4-221ENST00000513643 TRIM28Q13263 835 aaKnown RBP12.58□□□□□ -0.4
RNF4-221ENST00000513643 PARP10Q53GL7 1025 aa12.58□□□□□ -0.4
RNF4-221ENST00000513643 STYK1Q6J9G0 422 aa12.58□□□□□ -0.4
RNF4-221ENST00000513643 ANKRD13DQ6ZTN6 518 aa12.58□□□□□ -0.4
RNF4-221ENST00000513643 TTLL6Q8N841 843 aa12.58□□□□□ -0.4
RNF4-221ENST00000513643 C7orf43Q8WVR3 580 aa12.58□□□□□ -0.4
RNF4-221ENST00000513643 CHMP4AQ9BY43 222 aa12.58□□□□□ -0.4
RNF4-221ENST00000513643 FANCIQ9NVI1 1328 aa12.58□□□□□ -0.4
RNF4-221ENST00000513643 VAMP4O75379 141 aa12.57□□□□□ -0.4
RNF4-221ENST00000513643 NLRP10Q86W26 655 aa12.57□□□□□ -0.4
RNF4-221ENST00000513643 ZNF784Q8NCA9 323 aaPredicted RBP12.57□□□□□ -0.4
RNF4-221ENST00000513643 ISCA1Q9BUE6 129 aa12.57□□□□□ -0.4
RNF4-221ENST00000513643 NYXQ9GZU5 481 aa12.57□□□□□ -0.4
RNF4-221ENST00000513643 ABCC12Q96J65 1359 aa12.56□□□□□ -0.4
RNF4-221ENST00000513643 DLEC1Q9Y238 1755 aa12.56□□□□□ -0.4
RNF4-221ENST00000513643 ARFGEF1Q9Y6D6 1849 aa12.56□□□□□ -0.4
RNF4-221ENST00000513643 GPTP24298 496 aa12.56□□□□□ -0.4
RNF4-221ENST00000513643 HOXA10P31260 410 aaPredicted RBP12.56□□□□□ -0.4
RNF4-221ENST00000513643 AIMP1Q12904 312 aaKnown RBP12.56□□□□□ -0.4
RNF4-221ENST00000513643 ERFEQ4G0M1 354 aa12.56□□□□□ -0.4
RNF4-221ENST00000513643 HSP90AB3PQ58FF7 597 aa12.56□□□□□ -0.4
RNF4-221ENST00000513643 CCDC30Q5VVM6 783 aa12.56□□□□□ -0.4
RNF4-221ENST00000513643 MASTLQ96GX5 879 aa12.56□□□□□ -0.4
RNF4-221ENST00000513643 PHAXQ9H814 394 aaKnown RBP12.56□□□□□ -0.4
RNF4-221ENST00000513643 RNF123Q5XPI4 1314 aa12.56□□□□□ -0.4
RNF4-221ENST00000513643 TWISTNBQ3B726 338 aaPredicted RBP12.55□□□□□ -0.4
RNF4-221ENST00000513643 NUTM1Q86Y26 1132 aa12.55□□□□□ -0.4
RNF4-221ENST00000513643 CNKSR1Q969H4 720 aa12.55□□□□□ -0.4
RNF4-221ENST00000513643 SALL2Q9Y467 1007 aaPredicted RBP12.55□□□□□ -0.4
RNF4-221ENST00000513643 NPR1P16066 1061 aa12.54□□□□□ -0.4
RNF4-221ENST00000513643 PRELPP51888 382 aa12.54□□□□□ -0.4
RNF4-221ENST00000513643 GOLGA2Q08379 1002 aa12.54□□□□□ -0.4
RNF4-221ENST00000513643 ARHGAP27Q6ZUM4 889 aa12.54□□□□□ -0.4
RNF4-221ENST00000513643 PPP1R42Q7Z4L9 355 aa12.54□□□□□ -0.4
RNF4-221ENST00000513643 TRMT2AQ8IZ69 625 aaKnown RBP12.54□□□□□ -0.4
RNF4-221ENST00000513643 UTP14AQ9BVJ6 771 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms