RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 INHAP05111 366 aa7.13□□□□□ -1.27
PDLIM5-218ENST00000513341 NBPF1Q3BBV0 1214 aa7.13□□□□□ -1.27
PDLIM5-218ENST00000513341 BANK1Q8NDB2 785 aa7.13□□□□□ -1.27
PDLIM5-218ENST00000513341 CFTRP13569 1480 aa7.12□□□□□ -1.27
PDLIM5-218ENST00000513341 ZIC5Q96T25 663 aa7.12□□□□□ -1.27
PDLIM5-218ENST00000513341 NDUFB9Q9Y6M9 179 aa7.12□□□□□ -1.27
PDLIM5-218ENST00000513341 C9orf172C9J069 976 aa7.11□□□□□ -1.27
PDLIM5-218ENST00000513341 TATP17735 454 aaPredicted RBP7.11□□□□□ -1.27
PDLIM5-218ENST00000513341 SCNN1DP51172 638 aa7.11□□□□□ -1.27
PDLIM5-218ENST00000513341 SMTNP53814 917 aa7.11□□□□□ -1.27
PDLIM5-218ENST00000513341 TRIM28Q13263 835 aaKnown RBP7.11□□□□□ -1.27
PDLIM5-218ENST00000513341 ARSJQ5FYB0 599 aaPredicted RBP7.11□□□□□ -1.27
PDLIM5-218ENST00000513341 TNFRSF25Q93038 417 aa7.11□□□□□ -1.27
PDLIM5-218ENST00000513341 DOLKQ9UPQ8 538 aa7.11□□□□□ -1.27
PDLIM5-218ENST00000513341 APBB1O00213 710 aa7.1□□□□□ -1.27
PDLIM5-218ENST00000513341 CDK2AP1O14519 115 aa7.1□□□□□ -1.27
PDLIM5-218ENST00000513341 HYAL3O43820 417 aaPredicted RBP7.1□□□□□ -1.27
PDLIM5-218ENST00000513341 MTFR1Q15390 333 aa7.1□□□□□ -1.27
PDLIM5-218ENST00000513341 AIDAQ96BJ3 306 aa7.1□□□□□ -1.27
PDLIM5-218ENST00000513341 SLC4A9Q96Q91 983 aa7.1□□□□□ -1.27
PDLIM5-218ENST00000513341 SLC24A1O60721 1099 aa7.09□□□□□ -1.27
PDLIM5-218ENST00000513341 GDF10P55107 478 aa7.09□□□□□ -1.27
PDLIM5-218ENST00000513341 ADGRE1Q14246 886 aa7.09□□□□□ -1.27
PDLIM5-218ENST00000513341 SYT9Q86SS6 491 aa7.09□□□□□ -1.27
PDLIM5-218ENST00000513341 STRN4Q9NRL3 753 aa7.09□□□□□ -1.27
PDLIM5-218ENST00000513341 IQSEC3Q9UPP2 1182 aaPredicted RBP7.09□□□□□ -1.27
PDLIM5-218ENST00000513341 URB2Q14146 1524 aaKnown RBP7.09□□□□□ -1.27
PDLIM5-218ENST00000513341 RSF1Q96T23 1441 aaPredicted RBP7.09□□□□□ -1.28
PDLIM5-218ENST00000513341 M0R082 166 aa7.08□□□□□ -1.28
PDLIM5-218ENST00000513341 NID1P14543 1247 aa7.08□□□□□ -1.28
PDLIM5-218ENST00000513341 MICALL1Q8N3F8 863 aa7.08□□□□□ -1.28
PDLIM5-218ENST00000513341 ZNF417Q8TAU3 575 aa7.08□□□□□ -1.28
PDLIM5-218ENST00000513341 ZNF587Q96SQ5 575 aaPredicted RBP7.08□□□□□ -1.28
PDLIM5-218ENST00000513341 STARD13Q9Y3M8 1113 aa7.08□□□□□ -1.28
PDLIM5-218ENST00000513341 GPC6Q9Y625 555 aaPredicted RBP7.08□□□□□ -1.28
PDLIM5-218ENST00000513341 IFT140Q96RY7 1462 aa7.08□□□□□ -1.28
PDLIM5-218ENST00000513341 STAU1O95793 577 aaKnown RBP7.07□□□□□ -1.28
PDLIM5-218ENST00000513341 TSGA10IPQ3SY00 556 aa7.07□□□□□ -1.28
PDLIM5-218ENST00000513341 GJA3Q9Y6H8 435 aa7.07□□□□□ -1.28
PDLIM5-218ENST00000513341 NRG1Q02297 640 aaPredicted RBP7.06□□□□□ -1.28
PDLIM5-218ENST00000513341 MBTPS1Q14703 1052 aa7.06□□□□□ -1.28
PDLIM5-218ENST00000513341 ARAP1Q96P48 1450 aa7.05□□□□□ -1.28
PDLIM5-218ENST00000513341 FAM229AH3BQW9 127 aa7.05□□□□□ -1.28
PDLIM5-218ENST00000513341 GRIK4Q16099 956 aa7.05□□□□□ -1.28
PDLIM5-218ENST00000513341 C20orf204Q6ZNR8 217 aa7.05□□□□□ -1.28
PDLIM5-218ENST00000513341 TXNRD3Q86VQ6 643 aa7.05□□□□□ -1.28
PDLIM5-218ENST00000513341 MTMR14Q8NCE2 650 aa7.05□□□□□ -1.28
PDLIM5-218ENST00000513341 LENG1Q96BZ8 264 aaPredicted RBP7.05□□□□□ -1.28
PDLIM5-218ENST00000513341 A6NJY4 79 aa7.04□□□□□ -1.28
PDLIM5-218ENST00000513341 COBLO75128 1261 aa7.04□□□□□ -1.28
PDLIM5-218ENST00000513341 ALBP02768 609 aa7.04□□□□□ -1.28
PDLIM5-218ENST00000513341 ELNP15502 786 aa7.04□□□□□ -1.28
PDLIM5-218ENST00000513341 EIF4G2P78344 907 aaKnown RBP eCLIP7.04□□□□□ -1.28
PDLIM5-218ENST00000513341 MAP7D1Q3KQU3 841 aa7.04□□□□□ -1.28
PDLIM5-218ENST00000513341 SLFNL1Q499Z3 407 aa7.04□□□□□ -1.28
PDLIM5-218ENST00000513341 ZNF608Q9ULD9 1512 aaPredicted RBP7.04□□□□□ -1.28
PDLIM5-218ENST00000513341 ABCC8Q09428 1581 aa7.03□□□□□ -1.28
PDLIM5-218ENST00000513341 SELPP16109 830 aa7.03□□□□□ -1.28
PDLIM5-218ENST00000513341 MCTP1Q6DN14 999 aa7.03□□□□□ -1.28
PDLIM5-218ENST00000513341 SSBP4Q9BWG4 385 aaPredicted RBP7.03□□□□□ -1.28
PDLIM5-218ENST00000513341 KRTAP4-7Q9BYR0 210 aa7.03□□□□□ -1.28
PDLIM5-218ENST00000513341 WIZO95785 1651 aa7.03□□□□□ -1.28
PDLIM5-218ENST00000513341 TMEM229AB2RXF0 380 aa7.02□□□□□ -1.29
PDLIM5-218ENST00000513341 OXLD1Q5BKU9 147 aa7.02□□□□□ -1.29
PDLIM5-218ENST00000513341 RNF112Q9ULX5 631 aa7.02□□□□□ -1.29
PDLIM5-218ENST00000513341 COL17A1Q9UMD9 1497 aaPredicted RBP7.01□□□□□ -1.29
PDLIM5-218ENST00000513341 ADH7P40394 386 aa7.01□□□□□ -1.29
PDLIM5-218ENST00000513341 NEUROD1Q13562 356 aa7.01□□□□□ -1.29
PDLIM5-218ENST00000513341 BICDL1Q6ZP65 573 aa7.01□□□□□ -1.29
PDLIM5-218ENST00000513341 A0A0A0MRY4 1105 aa7□□□□□ -1.29
PDLIM5-218ENST00000513341 EML1O00423 815 aa7□□□□□ -1.29
PDLIM5-218ENST00000513341 ILDR2Q71H61 639 aa7□□□□□ -1.29
PDLIM5-218ENST00000513341 C7orf43Q8WVR3 580 aa7□□□□□ -1.29
PDLIM5-218ENST00000513341 CABP1Q9NZU7 370 aa7□□□□□ -1.29
PDLIM5-218ENST00000513341 CHD1O14646 1710 aa6.99□□□□□ -1.29
PDLIM5-218ENST00000513341 LILRB5O75023 590 aa6.99□□□□□ -1.29
PDLIM5-218ENST00000513341 KCNQ4P56696 695 aa6.99□□□□□ -1.29
PDLIM5-218ENST00000513341 TRAPPC3LQ5T215 181 aa6.99□□□□□ -1.29
PDLIM5-218ENST00000513341 C8orf86Q6ZUL3 223 aa6.99□□□□□ -1.29
PDLIM5-218ENST00000513341 SLC51AQ86UW1 340 aa6.99□□□□□ -1.29
PDLIM5-218ENST00000513341 FMNL2Q96PY5 1086 aa6.99□□□□□ -1.29
PDLIM5-218ENST00000513341 SLC30A3Q99726 388 aa6.99□□□□□ -1.29
PDLIM5-218ENST00000513341 USP3Q9Y6I4 520 aa6.99□□□□□ -1.29
PDLIM5-218ENST00000513341 PRDM2Q13029 1718 aa6.98□□□□□ -1.29
PDLIM5-218ENST00000513341 TXKP42681 527 aa6.98□□□□□ -1.29
PDLIM5-218ENST00000513341 RAC1P63000 192 aa6.98□□□□□ -1.29
PDLIM5-218ENST00000513341 TEAD4Q15561 434 aa6.98□□□□□ -1.29
PDLIM5-218ENST00000513341 TP53INP1Q96A56 240 aa6.98□□□□□ -1.29
PDLIM5-218ENST00000513341 ARID1BQ8NFD5 2236 aaPredicted RBP6.98□□□□□ -1.29
PDLIM5-218ENST00000513341 EIF4G3O43432 1585 aaKnown RBP6.98□□□□□ -1.29
PDLIM5-218ENST00000513341 TOPBP1Q92547 1522 aa6.97□□□□□ -1.29
PDLIM5-218ENST00000513341 BACH1O14867 736 aa6.97□□□□□ -1.29
PDLIM5-218ENST00000513341 PAX4O43316 350 aa6.97□□□□□ -1.29
PDLIM5-218ENST00000513341 TXLNAP40222 546 aa6.97□□□□□ -1.29
PDLIM5-218ENST00000513341 SPEM2Q0P670 501 aa6.97□□□□□ -1.29
PDLIM5-218ENST00000513341 SFSWAPQ12872 951 aaKnown RBP6.97□□□□□ -1.29
PDLIM5-218ENST00000513341 LCE1DQ5T752 114 aa6.97□□□□□ -1.29
PDLIM5-218ENST00000513341 SCHIP1Q9P0W5 487 aaPredicted RBP6.97□□□□□ -1.29
PDLIM5-218ENST00000513341 SERTAD1Q9UHV2 236 aa6.97□□□□□ -1.29
PDLIM5-218ENST00000513341 AQRO60306 1485 aaKnown RBP eCLIP6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms