RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 A0A087WZG4 1122 aa15.35■□□□□ 0.05
RNF4-218ENST00000513284 MASTLQ96GX5 879 aa15.35■□□□□ 0.05
RNF4-218ENST00000513284 PANK3Q9H999 370 aa15.35■□□□□ 0.05
RNF4-218ENST00000513284 ZNF277Q9NRM2 450 aaPredicted RBP15.35■□□□□ 0.05
RNF4-218ENST00000513284 HACL1Q9UJ83 578 aa15.35■□□□□ 0.05
RNF4-218ENST00000513284 CAMTA2O94983 1202 aa15.34■□□□□ 0.05
RNF4-218ENST00000513284 STARD3NLO95772 234 aa15.34■□□□□ 0.05
RNF4-218ENST00000513284 MTHFSDQ2M296 383 aaKnown RBP15.34■□□□□ 0.05
RNF4-218ENST00000513284 ZNF496Q96IT1 587 aaPredicted RBP15.34■□□□□ 0.05
RNF4-218ENST00000513284 CACNA1SQ13698 1873 aa15.33■□□□□ 0.05
RNF4-218ENST00000513284 POLR3GLQ9BT43 218 aa15.33■□□□□ 0.04
RNF4-218ENST00000513284 FZD9O00144 591 aa15.32■□□□□ 0.04
RNF4-218ENST00000513284 A1BGP04217 495 aa15.32■□□□□ 0.04
RNF4-218ENST00000513284 FKBP4Q02790 459 aaKnown RBP eCLIP15.32■□□□□ 0.04
RNF4-218ENST00000513284 SOGA3Q5TF21 947 aa15.32■□□□□ 0.04
RNF4-218ENST00000513284 CNBD1Q8NA66 436 aa15.32■□□□□ 0.04
RNF4-218ENST00000513284 SETDB2Q96T68 719 aa15.32■□□□□ 0.04
RNF4-218ENST00000513284 DDX21Q9NR30 783 aaKnown RBP eCLIP15.32■□□□□ 0.04
RNF4-218ENST00000513284 RNF123Q5XPI4 1314 aa15.32■□□□□ 0.04
RNF4-218ENST00000513284 UBR2Q8IWV8 1755 aa15.31■□□□□ 0.04
RNF4-218ENST00000513284 KLRG2A4D1S0 409 aaPredicted RBP15.31■□□□□ 0.04
RNF4-218ENST00000513284 HMOX1P09601 288 aa15.31■□□□□ 0.04
RNF4-218ENST00000513284 IL6STP40189 918 aaPredicted RBP15.31■□□□□ 0.04
RNF4-218ENST00000513284 CST9Q5W186 159 aa15.31■□□□□ 0.04
RNF4-218ENST00000513284 PNMA8AQ86V59 439 aaPredicted RBP15.31■□□□□ 0.04
RNF4-218ENST00000513284 MORC1Q86VD1 984 aa15.31■□□□□ 0.04
RNF4-218ENST00000513284 ABT1Q9ULW3 272 aaKnown RBP15.31■□□□□ 0.04
RNF4-218ENST00000513284 CCDC93Q567U6 631 aa15.3■□□□□ 0.04
RNF4-218ENST00000513284 CYP4F22Q6NT55 531 aa15.3■□□□□ 0.04
RNF4-218ENST00000513284 CAPNS2Q96L46 248 aa15.3■□□□□ 0.04
RNF4-218ENST00000513284 GPR101Q96P66 508 aaPredicted RBP15.3■□□□□ 0.04
RNF4-218ENST00000513284 TSKSQ9UJT2 592 aa15.3■□□□□ 0.04
RNF4-218ENST00000513284 ARFGEF2Q9Y6D5 1785 aa15.29■□□□□ 0.04
RNF4-218ENST00000513284 HEG1Q9ULI3 1381 aa15.29■□□□□ 0.04
RNF4-218ENST00000513284 SYNE4Q8N205 404 aa15.29■□□□□ 0.04
RNF4-218ENST00000513284 IL17REQ8NFR9 667 aa15.29■□□□□ 0.04
RNF4-218ENST00000513284 ZNF330Q9Y3S2 320 aaPredicted RBP15.29■□□□□ 0.04
RNF4-218ENST00000513284 SCN7AQ01118 1682 aa15.28■□□□□ 0.04
RNF4-218ENST00000513284 AOC2O75106 756 aa15.28■□□□□ 0.04
RNF4-218ENST00000513284 ST5P78524 1137 aa15.28■□□□□ 0.04
RNF4-218ENST00000513284 ZNF790Q6PG37 636 aa15.28■□□□□ 0.04
RNF4-218ENST00000513284 TRAF5O00463 557 aa15.27■□□□□ 0.04
RNF4-218ENST00000513284 KCNQ3O43525 872 aa15.27■□□□□ 0.04
RNF4-218ENST00000513284 NPR1P16066 1061 aa15.27■□□□□ 0.04
RNF4-218ENST00000513284 IARSP41252 1262 aaKnown RBP15.27■□□□□ 0.04
RNF4-218ENST00000513284 GPC2Q8N158 579 aa15.27■□□□□ 0.04
RNF4-218ENST00000513284 TEX13AQ9BXU3 409 aaPredicted RBP15.27■□□□□ 0.04
RNF4-218ENST00000513284 MCOLN1Q9GZU1 580 aa15.27■□□□□ 0.04
RNF4-218ENST00000513284 SNED1Q8TER0 1413 aa15.26■□□□□ 0.03
RNF4-218ENST00000513284 LTBP1Q14766 1721 aa15.26■□□□□ 0.03
RNF4-218ENST00000513284 THSD7BQ9C0I4 1608 aa15.26■□□□□ 0.03
RNF4-218ENST00000513284 EPS15P42566 896 aa15.26■□□□□ 0.03
RNF4-218ENST00000513284 PIP4K2AP48426 406 aaPredicted RBP15.26■□□□□ 0.03
RNF4-218ENST00000513284 RTKN2Q8IZC4 609 aa15.26■□□□□ 0.03
RNF4-218ENST00000513284 TTC5Q8N0Z6 440 aa15.26■□□□□ 0.03
RNF4-218ENST00000513284 COL4A5P29400 1685 aa15.25■□□□□ 0.03
RNF4-218ENST00000513284 DZIP3Q86Y13 1208 aaKnown RBP15.25■□□□□ 0.03
RNF4-218ENST00000513284 USP16Q9Y5T5 823 aa15.25■□□□□ 0.03
RNF4-218ENST00000513284 NPHP1O15259 732 aa15.24■□□□□ 0.03
RNF4-218ENST00000513284 MAP2K2P36507 400 aa15.24■□□□□ 0.03
RNF4-218ENST00000513284 ECE1P42892 770 aa15.24■□□□□ 0.03
RNF4-218ENST00000513284 SCNN1DP51172 638 aa15.24■□□□□ 0.03
RNF4-218ENST00000513284 GRM1Q13255 1194 aa15.24■□□□□ 0.03
RNF4-218ENST00000513284 NBPF5PQ86XG9 351 aaPredicted RBP15.24■□□□□ 0.03
RNF4-218ENST00000513284 TLL2Q9Y6L7 1015 aa15.24■□□□□ 0.03
RNF4-218ENST00000513284 PRAMEF22A3QJZ6 481 aa15.23■□□□□ 0.03
RNF4-218ENST00000513284 CLEC4GQ6UXB4 293 aa15.23■□□□□ 0.03
RNF4-218ENST00000513284 SLC51AQ86UW1 340 aa15.23■□□□□ 0.03
RNF4-218ENST00000513284 BEGAINQ9BUH8 593 aa15.23■□□□□ 0.03
RNF4-218ENST00000513284 GJA3Q9Y6H8 435 aa15.23■□□□□ 0.03
RNF4-218ENST00000513284 CASP8AP2Q9UKL3 1982 aa15.22■□□□□ 0.03
RNF4-218ENST00000513284 PAXIP1Q6ZW49 1069 aaPredicted RBP15.22■□□□□ 0.03
RNF4-218ENST00000513284 AMER1Q5JTC6 1135 aaPredicted RBP15.21■□□□□ 0.03
RNF4-218ENST00000513284 CFAP44Q96MT7 982 aa15.21■□□□□ 0.03
RNF4-218ENST00000513284 FMNL2Q96PY5 1086 aa15.21■□□□□ 0.03
RNF4-218ENST00000513284 PSMD1Q99460 953 aa15.21■□□□□ 0.03
RNF4-218ENST00000513284 ALDH1B1P30837 517 aa15.2■□□□□ 0.02
RNF4-218ENST00000513284 TPTE2Q6XPS3 522 aa15.2■□□□□ 0.02
RNF4-218ENST00000513284 SAPCD2Q86UD0 394 aa15.2■□□□□ 0.02
RNF4-218ENST00000513284 ZIC5Q96T25 663 aa15.2■□□□□ 0.02
RNF4-218ENST00000513284 BCORQ6W2J9 1755 aa15.2■□□□□ 0.02
RNF4-218ENST00000513284 SIPA1L3O60292 1781 aaPredicted RBP15.19■□□□□ 0.02
RNF4-218ENST00000513284 FAM177BA6PVY3 158 aa15.19■□□□□ 0.02
RNF4-218ENST00000513284 GNAT3A8MTJ3 354 aa15.19■□□□□ 0.02
RNF4-218ENST00000513284 NBPF26B4DH59 902 aa15.19■□□□□ 0.02
RNF4-218ENST00000513284 TEFQ10587 303 aa15.19■□□□□ 0.02
RNF4-218ENST00000513284 NBPF10Q6P3W6 841 aaKnown RBP15.19■□□□□ 0.02
RNF4-218ENST00000513284 USP50Q70EL3 339 aaPredicted RBP15.19■□□□□ 0.02
RNF4-218ENST00000513284 NBPF15Q8N660 670 aa15.19■□□□□ 0.02
RNF4-218ENST00000513284 JDP2Q8WYK2 163 aa15.19■□□□□ 0.02
RNF4-218ENST00000513284 TRPM7Q96QT4 1865 aa15.18■□□□□ 0.02
RNF4-218ENST00000513284 EIF6P56537 245 aaKnown RBP15.18■□□□□ 0.02
RNF4-218ENST00000513284 DGKZQ13574 1117 aa15.18■□□□□ 0.02
RNF4-218ENST00000513284 HLFQ16534 295 aa15.18■□□□□ 0.02
RNF4-218ENST00000513284 NIP7Q9Y221 180 aaKnown RBP eCLIP15.18■□□□□ 0.02
RNF4-218ENST00000513284 DIAPH1O60610 1272 aaKnown RBP15.17■□□□□ 0.02
RNF4-218ENST00000513284 HSPA5P11021 654 aaKnown RBP15.17■□□□□ 0.02
RNF4-218ENST00000513284 CRY2Q49AN0 593 aa15.17■□□□□ 0.02
RNF4-218ENST00000513284 KNSTRNQ9Y448 316 aa15.17■□□□□ 0.02
RNF4-218ENST00000513284 CEMIPQ8WUJ3 1361 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms