RNA–Protein interactions for RNA: ENST00000512620.5

CAST-238, Transcript of calpastatin, human

TSL 5

Gene CAST, Length 904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAST-238	ENST00000512620	TNFRSF10B	O14763	440 aa		5.75	□□□□□ -1.49
CAST-238	ENST00000512620	ZBTB39	O15060	712 aa		5.75	□□□□□ -1.49
CAST-238	ENST00000512620	GDF11	O95390	407 aa		5.75	□□□□□ -1.49
CAST-238	ENST00000512620	SF3B2	Q13435	895 aa	Known RBP	5.75	□□□□□ -1.49
CAST-238	ENST00000512620	DGKZ	Q13574	1117 aa		5.75	□□□□□ -1.49
CAST-238	ENST00000512620	PRICKLE2	Q7Z3G6	844 aa		5.75	□□□□□ -1.49
CAST-238	ENST00000512620	PPARGC1B	Q86YN6	1023 aa	Known RBP	5.75	□□□□□ -1.49
CAST-238	ENST00000512620	ZNF295-AS1	Q8N0V1	137 aa		5.75	□□□□□ -1.49
CAST-238	ENST00000512620	COL26A1	Q96A83	441 aa		5.75	□□□□□ -1.49
CAST-238	ENST00000512620	AIDA	Q96BJ3	306 aa		5.75	□□□□□ -1.49
CAST-238	ENST00000512620	KLRG1	Q96E93	195 aa		5.75	□□□□□ -1.49
CAST-238	ENST00000512620	PHACTR1	Q9C0D0	580 aa		5.75	□□□□□ -1.49
CAST-238	ENST00000512620	ADAMTS8	Q9UP79	889 aa		5.75	□□□□□ -1.49
CAST-238	ENST00000512620	FIGNL2	A6NMB9	653 aa		5.74	□□□□□ -1.49
CAST-238	ENST00000512620	RHOQ	P17081	205 aa		5.74	□□□□□ -1.49
CAST-238	ENST00000512620	GTF2E1	P29083	439 aa	Predicted RBP	5.74	□□□□□ -1.49
CAST-238	ENST00000512620	EIF1AX	P47813	144 aa	Known RBP	5.74	□□□□□ -1.49
CAST-238	ENST00000512620	POU4F2	Q12837	409 aa		5.74	□□□□□ -1.49
CAST-238	ENST00000512620	TEAD4	Q15561	434 aa		5.74	□□□□□ -1.49
CAST-238	ENST00000512620	C4orf17	Q53FE4	359 aa		5.74	□□□□□ -1.49
CAST-238	ENST00000512620	NBPF15	Q8N660	670 aa		5.74	□□□□□ -1.49
CAST-238	ENST00000512620	NANOS1	Q8WY41	292 aa	Known RBP	5.74	□□□□□ -1.49
CAST-238	ENST00000512620	TSEN34	Q9BSV6	310 aa	Known RBP	5.74	□□□□□ -1.49
CAST-238	ENST00000512620	NIFK	Q9BYG3	293 aa	Known RBP	5.74	□□□□□ -1.49
CAST-238	ENST00000512620	CCDC87	Q9NVE4	849 aa		5.74	□□□□□ -1.49
CAST-238	ENST00000512620	SPINT1	O43278	529 aa		5.73	□□□□□ -1.49
CAST-238	ENST00000512620	TAGLN	Q01995	201 aa	Known RBP	5.73	□□□□□ -1.49
CAST-238	ENST00000512620	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	5.73	□□□□□ -1.49	7e-8	■■■□□ 15.1
CAST-238	ENST00000512620	GNAS	Q5JWF2	1037 aa		5.73	□□□□□ -1.49
CAST-238	ENST00000512620	RHBDD1	Q8TEB9	315 aa		5.73	□□□□□ -1.49
CAST-238	ENST00000512620	GRIP2	Q9C0E4	1043 aa		5.73	□□□□□ -1.49
CAST-238	ENST00000512620	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	5.73	□□□□□ -1.49	8e-7	■■■■■ 104.9
CAST-238	ENST00000512620	STIM2	Q9P246	746 aa		5.73	□□□□□ -1.49
CAST-238	ENST00000512620	DCTN4	Q9UJW0	460 aa		5.73	□□□□□ -1.49
CAST-238	ENST00000512620	DNMT3L	Q9UJW3	386 aa		5.73	□□□□□ -1.49
CAST-238	ENST00000512620	AMOTL2	Q9Y2J4	779 aa		5.73	□□□□□ -1.49
CAST-238	ENST00000512620	FAM13A	O94988	1023 aa		5.72	□□□□□ -1.49
CAST-238	ENST00000512620	IGHA1	P01876	353 aa		5.72	□□□□□ -1.49
CAST-238	ENST00000512620	RNF144A	P50876	292 aa	Predicted RBP	5.72	□□□□□ -1.49
CAST-238	ENST00000512620	KRT76	Q01546	638 aa		5.72	□□□□□ -1.49
CAST-238	ENST00000512620	ETFBKMT	Q8IXQ9	262 aa		5.72	□□□□□ -1.49
CAST-238	ENST00000512620	STAG2	Q8N3U4	1231 aa		5.72	□□□□□ -1.49
CAST-238	ENST00000512620	GPR161	Q8N6U8	529 aa	Known RBP	5.72	□□□□□ -1.49
CAST-238	ENST00000512620	TMC1	Q8TDI8	760 aa		5.72	□□□□□ -1.49
CAST-238	ENST00000512620	UNCX	A6NJT0	531 aa		5.71	□□□□□ -1.5
CAST-238	ENST00000512620		E9PSI1	815 aa		5.71	□□□□□ -1.5
CAST-238	ENST00000512620	NPAS4	Q8IUM7	802 aa		5.71	□□□□□ -1.5
CAST-238	ENST00000512620	RNF217	Q8TC41	542 aa		5.71	□□□□□ -1.5
CAST-238	ENST00000512620	RHPN1	Q8TCX5	695 aa		5.71	□□□□□ -1.5
CAST-238	ENST00000512620	GIPC2	Q8TF65	315 aa		5.71	□□□□□ -1.5
CAST-238	ENST00000512620	IFT43	Q96FT9	208 aa		5.71	□□□□□ -1.5
CAST-238	ENST00000512620	HSH2D	Q96JZ2	352 aa		5.71	□□□□□ -1.5
CAST-238	ENST00000512620	CNTNAP3B	Q96NU0	1288 aa		5.71	□□□□□ -1.5
CAST-238	ENST00000512620	BCL2L13	Q9BXK5	485 aa		5.71	□□□□□ -1.5
CAST-238	ENST00000512620	CNTNAP3	Q9BZ76	1288 aa		5.71	□□□□□ -1.5
CAST-238	ENST00000512620	BRPF3	Q9ULD4	1205 aa		5.71	□□□□□ -1.5
CAST-238	ENST00000512620	FZD6	O60353	706 aa		5.7	□□□□□ -1.5
CAST-238	ENST00000512620	DNM1	Q05193	864 aa	Known RBP	5.7	□□□□□ -1.5
CAST-238	ENST00000512620	RTN1	Q16799	776 aa		5.7	□□□□□ -1.5
CAST-238	ENST00000512620	POTEA	Q6S8J7	498 aa		5.7	□□□□□ -1.5
CAST-238	ENST00000512620	TMC7	Q7Z402	723 aa		5.7	□□□□□ -1.5
CAST-238	ENST00000512620	ZNF280C	Q8ND82	737 aa		5.7	□□□□□ -1.5
CAST-238	ENST00000512620	MYO19	Q96H55	970 aa		5.7	□□□□□ -1.5
CAST-238	ENST00000512620	BCS1L	Q9Y276	419 aa		5.7	□□□□□ -1.5
CAST-238	ENST00000512620	USP20	Q9Y2K6	914 aa		5.7	□□□□□ -1.5
CAST-238	ENST00000512620		A6NHS1	94 aa		5.69	□□□□□ -1.5
CAST-238	ENST00000512620	TTLL8	A6PVC2	850 aa		5.69	□□□□□ -1.5
CAST-238	ENST00000512620	NDUFB5	O43674	189 aa		5.69	□□□□□ -1.5
CAST-238	ENST00000512620	SLURP2	P0DP57	97 aa		5.69	□□□□□ -1.5
CAST-238	ENST00000512620	NPR3	P17342	541 aa		5.69	□□□□□ -1.5
CAST-238	ENST00000512620	BRD2	P25440	801 aa	Known RBP	5.69	□□□□□ -1.5
CAST-238	ENST00000512620	GPC1	P35052	558 aa		5.69	□□□□□ -1.5
CAST-238	ENST00000512620	ZAP70	P43403	619 aa		5.69	□□□□□ -1.5
CAST-238	ENST00000512620	HIRA	P54198	1017 aa	Predicted RBP	5.69	□□□□□ -1.5
CAST-238	ENST00000512620	PTS	Q03393	145 aa		5.69	□□□□□ -1.5
CAST-238	ENST00000512620	C11orf91	Q3C1V1	193 aa		5.69	□□□□□ -1.5
CAST-238	ENST00000512620	ZNF385C	Q66K41	422 aa	Predicted RBP	5.69	□□□□□ -1.5
CAST-238	ENST00000512620	KANK3	Q6NY19	840 aa		5.69	□□□□□ -1.5
CAST-238	ENST00000512620	NBPF10	Q6P3W6	841 aa	Known RBP	5.69	□□□□□ -1.5
CAST-238	ENST00000512620	BICDL1	Q6ZP65	573 aa		5.69	□□□□□ -1.5
CAST-238	ENST00000512620	LYSMD3	Q7Z3D4	306 aa		5.69	□□□□□ -1.5
CAST-238	ENST00000512620	TREML1	Q86YW5	311 aa		5.69	□□□□□ -1.5
CAST-238	ENST00000512620	GPR152	Q8TDT2	470 aa		5.69	□□□□□ -1.5
CAST-238	ENST00000512620	EDEM1	Q92611	657 aa		5.69	□□□□□ -1.5
CAST-238	ENST00000512620	ASB16	Q96NS5	453 aa		5.69	□□□□□ -1.5
CAST-238	ENST00000512620	COL25A1	Q9BXS0	654 aa	Predicted RBP	5.69	□□□□□ -1.5
CAST-238	ENST00000512620	GPAM	Q9HCL2	828 aa		5.69	□□□□□ -1.5
CAST-238	ENST00000512620	POLI	Q9UNA4	740 aa		5.69	□□□□□ -1.5
CAST-238	ENST00000512620	ARHGEF15	O94989	841 aa		5.68	□□□□□ -1.5
CAST-238	ENST00000512620	NBPF1	Q3BBV0	1214 aa		5.68	□□□□□ -1.5
CAST-238	ENST00000512620	ABTB2	Q8N961	1025 aa		5.68	□□□□□ -1.5
CAST-238	ENST00000512620	TIMMDC1	Q9NPL8	285 aa		5.68	□□□□□ -1.5
CAST-238	ENST00000512620	SLC35F4	A4IF30	521 aa		5.67	□□□□□ -1.5
CAST-238	ENST00000512620	SPATA31C2	B4DYI2	1134 aa		5.67	□□□□□ -1.5
CAST-238	ENST00000512620	P4HB	P07237	508 aa	Known RBP	5.67	□□□□□ -1.5
CAST-238	ENST00000512620	ZNF16	P17020	682 aa	Predicted RBP	5.67	□□□□□ -1.5
CAST-238	ENST00000512620	ATP4A	P20648	1035 aa		5.67	□□□□□ -1.5
CAST-238	ENST00000512620	ARSJ	Q5FYB0	599 aa	Predicted RBP	5.67	□□□□□ -1.5
CAST-238	ENST00000512620	LRRC69	Q6ZNQ3	347 aa		5.67	□□□□□ -1.5
CAST-238	ENST00000512620	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	5.67	□□□□□ -1.5

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