RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 ERFEQ4G0M1 354 aa8.13□□□□□ -1.11
CHD1-208ENST00000512392 ODR4Q5SWX8 454 aa8.13□□□□□ -1.11
CHD1-208ENST00000512392 TRMT44Q8IYL2 757 aaKnown RBP8.13□□□□□ -1.11
CHD1-208ENST00000512392 RGL4Q8IZJ4 473 aa8.13□□□□□ -1.11
CHD1-208ENST00000512392 MPNDQ8N594 471 aa8.13□□□□□ -1.11
CHD1-208ENST00000512392 SLC39A13Q96H72 371 aa8.13□□□□□ -1.11
CHD1-208ENST00000512392 MRGPRX2Q96LB1 330 aa8.13□□□□□ -1.11
CHD1-208ENST00000512392 PARP2Q9UGN5 583 aa8.13□□□□□ -1.11
CHD1-208ENST00000512392 SIAH2O43255 324 aa8.13□□□□□ -1.11
CHD1-208ENST00000512392 ZNF500O60304 480 aaPredicted RBP8.13□□□□□ -1.11
CHD1-208ENST00000512392 XPCQ01831 940 aaPredicted RBP8.13□□□□□ -1.11
CHD1-208ENST00000512392 SOGA3Q5TF21 947 aa8.13□□□□□ -1.11
CHD1-208ENST00000512392 WDR78Q5VTH9 848 aa8.13□□□□□ -1.11
CHD1-208ENST00000512392 RNPC3Q96LT9 517 aaKnown RBP8.13□□□□□ -1.11
CHD1-208ENST00000512392 SENP7Q9BQF6 1050 aa8.13□□□□□ -1.11
CHD1-208ENST00000512392 MAP3K20Q9NYL2 800 aaKnown RBP8.13□□□□□ -1.11
CHD1-208ENST00000512392 ENPP3O14638 875 aa8.12□□□□□ -1.11
CHD1-208ENST00000512392 RASA1P20936 1047 aa8.12□□□□□ -1.11
CHD1-208ENST00000512392 ZNF76P36508 570 aa8.12□□□□□ -1.11
CHD1-208ENST00000512392 EIF4G2P78344 907 aaKnown RBP eCLIP8.12□□□□□ -1.11
CHD1-208ENST00000512392 PRR20EP86478 221 aa8.12□□□□□ -1.11
CHD1-208ENST00000512392 PRR20CP86479 221 aa8.12□□□□□ -1.11
CHD1-208ENST00000512392 PRR20DP86480 221 aa8.12□□□□□ -1.11
CHD1-208ENST00000512392 PRR20BP86481 221 aa8.12□□□□□ -1.11
CHD1-208ENST00000512392 PRR20AP86496 221 aa8.12□□□□□ -1.11
CHD1-208ENST00000512392 SFMBT1Q9UHJ3 866 aa8.12□□□□□ -1.11
CHD1-208ENST00000512392 CFAP69A5D8W1 941 aa8.11□□□□□ -1.11
CHD1-208ENST00000512392 USP17L5A8MUK1 530 aa8.11□□□□□ -1.11
CHD1-208ENST00000512392 GIGYF1O75420 1035 aaPredicted RBP8.11□□□□□ -1.11
CHD1-208ENST00000512392 RINLQ6ZS11 566 aa8.11□□□□□ -1.11
CHD1-208ENST00000512392 C1orf216Q8TAB5 229 aa8.11□□□□□ -1.11
CHD1-208ENST00000512392 ZNF512BQ96KM6 892 aaPredicted RBP8.11□□□□□ -1.11
CHD1-208ENST00000512392 METTL5Q9NRN9 209 aaKnown RBP8.11□□□□□ -1.11
CHD1-208ENST00000512392 INPP5FQ9Y2H2 1132 aa8.11□□□□□ -1.11
CHD1-208ENST00000512392 TNFRSF10BO14763 440 aa8.11□□□□□ -1.11
CHD1-208ENST00000512392 PRMT3O60678 531 aa8.11□□□□□ -1.11
CHD1-208ENST00000512392 RACK1P63244 317 aaKnown RBP8.11□□□□□ -1.11
CHD1-208ENST00000512392 TRIM67Q6ZTA4 783 aa8.11□□□□□ -1.11
CHD1-208ENST00000512392 C8orf48Q96LL4 319 aa8.11□□□□□ -1.11
CHD1-208ENST00000512392 CDV3Q9UKY7 258 aaKnown RBP8.11□□□□□ -1.11
CHD1-208ENST00000512392 K7ELQ4 463 aaPredicted RBP8.1□□□□□ -1.11
CHD1-208ENST00000512392 C21orf2O43822 256 aa8.1□□□□□ -1.11
CHD1-208ENST00000512392 DHX8Q14562 1220 aaKnown RBP8.1□□□□□ -1.11
CHD1-208ENST00000512392 ZNF394Q53GI3 561 aa8.1□□□□□ -1.11
CHD1-208ENST00000512392 TAS1R3Q7RTX0 852 aa8.1□□□□□ -1.11
CHD1-208ENST00000512392 DZIP3Q86Y13 1208 aaKnown RBP8.1□□□□□ -1.11
CHD1-208ENST00000512392 SNIP1Q8TAD8 396 aaKnown RBP8.1□□□□□ -1.11
CHD1-208ENST00000512392 MRFAP1L1Q96HT8 127 aa8.1□□□□□ -1.11
CHD1-208ENST00000512392 CDK15Q96Q40 435 aa8.1□□□□□ -1.11
CHD1-208ENST00000512392 CHST12Q9NRB3 414 aa8.1□□□□□ -1.11
CHD1-208ENST00000512392 PCDHB9Q9Y5E1 797 aa8.1□□□□□ -1.11
CHD1-208ENST00000512392 PCDHGB7Q9Y5F8 929 aa8.1□□□□□ -1.11
CHD1-208ENST00000512392 NEFMP07197 916 aa8.1□□□□□ -1.11
CHD1-208ENST00000512392 SKIP12755 728 aa8.1□□□□□ -1.11
CHD1-208ENST00000512392 LIG1P18858 919 aa8.1□□□□□ -1.11
CHD1-208ENST00000512392 ANKMY2Q8IV38 441 aa8.1□□□□□ -1.11
CHD1-208ENST00000512392 SLC10A4Q96EP9 437 aa8.1□□□□□ -1.11
CHD1-208ENST00000512392 MAP4K5Q9Y4K4 846 aa8.1□□□□□ -1.11
CHD1-208ENST00000512392 EID1Q9Y6B2 187 aa8.1□□□□□ -1.11
CHD1-208ENST00000512392 STK10O94804 968 aaKnown RBP8.09□□□□□ -1.11
CHD1-208ENST00000512392 LDHAP00338 332 aaKnown RBP8.09□□□□□ -1.11
CHD1-208ENST00000512392 PTMAP06454 111 aaKnown RBP8.09□□□□□ -1.11
CHD1-208ENST00000512392 RBM10P98175 930 aaKnown RBP8.09□□□□□ -1.11
CHD1-208ENST00000512392 PDE3BQ13370 1112 aa8.09□□□□□ -1.11
CHD1-208ENST00000512392 CCDC184Q52MB2 194 aa8.09□□□□□ -1.11
CHD1-208ENST00000512392 TMC7Q7Z402 723 aa8.09□□□□□ -1.11
CHD1-208ENST00000512392 GTF3C2Q8WUA4 911 aaPredicted RBP8.09□□□□□ -1.11
CHD1-208ENST00000512392 MPHOSPH6Q99547 160 aaKnown RBP8.09□□□□□ -1.11
CHD1-208ENST00000512392 DUSP9Q99956 384 aaKnown RBP8.09□□□□□ -1.11
CHD1-208ENST00000512392 SEPT3Q9UH03 358 aa8.09□□□□□ -1.11
CHD1-208ENST00000512392 DNMT3AQ9Y6K1 912 aaPredicted RBP8.09□□□□□ -1.11
CHD1-208ENST00000512392 TNFRSF10AO00220 468 aa8.08□□□□□ -1.12
CHD1-208ENST00000512392 EPB41L2O43491 1005 aaKnown RBP8.08□□□□□ -1.12
CHD1-208ENST00000512392 FGRP09769 529 aa8.08□□□□□ -1.12
CHD1-208ENST00000512392 DPYDQ12882 1025 aa8.08□□□□□ -1.12
CHD1-208ENST00000512392 NFE2L2Q16236 605 aa8.08□□□□□ -1.12
CHD1-208ENST00000512392 CYP4X1Q8N118 509 aa8.08□□□□□ -1.12
CHD1-208ENST00000512392 CACTIN-AS1Q8N1I8 211 aa8.08□□□□□ -1.12
CHD1-208ENST00000512392 PRIMPOLQ96LW4 560 aa8.08□□□□□ -1.12
CHD1-208ENST00000512392 TOR4AQ9NXH8 423 aa8.08□□□□□ -1.12
CHD1-208ENST00000512392 SWAP70Q9UH65 585 aa8.08□□□□□ -1.12
CHD1-208ENST00000512392 OCLNQ16625 522 aa8.08□□□□□ -1.12
CHD1-208ENST00000512392 TTC39BQ5VTQ0 682 aaPredicted RBP8.08□□□□□ -1.12
CHD1-208ENST00000512392 LARP1Q6PKG0 1096 aaKnown RBP8.08□□□□□ -1.12
CHD1-208ENST00000512392 CAPN12Q6ZSI9 719 aa8.08□□□□□ -1.12
CHD1-208ENST00000512392 CCDC85AQ96PX6 553 aaPredicted RBP8.08□□□□□ -1.12
CHD1-208ENST00000512392 MRS2Q9HD23 443 aa8.08□□□□□ -1.12
CHD1-208ENST00000512392 PDZRN3Q9UPQ7 1066 aa8.08□□□□□ -1.12
CHD1-208ENST00000512392 EMILIN1Q9Y6C2 1016 aa8.08□□□□□ -1.12
CHD1-208ENST00000512392 TTC24A2A3L6 582 aaPredicted RBP8.07□□□□□ -1.12
CHD1-208ENST00000512392 SORBS3O60504 671 aa8.07□□□□□ -1.12
CHD1-208ENST00000512392 VIL1P09327 827 aaKnown RBP8.07□□□□□ -1.12
CHD1-208ENST00000512392 PLEKHG4Q58EX7 1191 aa8.07□□□□□ -1.12
CHD1-208ENST00000512392 PLEKHM2Q8IWE5 1019 aa8.07□□□□□ -1.12
CHD1-208ENST00000512392 KANSL2Q9H9L4 492 aa8.07□□□□□ -1.12
CHD1-208ENST00000512392 GEMIN8Q9NWZ8 242 aaKnown RBP8.07□□□□□ -1.12
CHD1-208ENST00000512392 GNALP38405 381 aa8.06□□□□□ -1.12
CHD1-208ENST00000512392 USP5P45974 858 aa8.06□□□□□ -1.12
CHD1-208ENST00000512392 ARID5BQ14865 1188 aa8.06□□□□□ -1.12
CHD1-208ENST00000512392 SWI5Q1ZZU3 235 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms