RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 SBF1O95248 1867 aa17.39■□□□□ 0.38
RNF4-215ENST00000511843 CHL1O00533 1208 aa17.39■□□□□ 0.37
RNF4-215ENST00000511843 ANXA1P04083 346 aa17.39■□□□□ 0.37
RNF4-215ENST00000511843 MRS2Q9HD23 443 aa17.39■□□□□ 0.37
RNF4-215ENST00000511843 CCDC88AQ3V6T2 1871 aa17.39■□□□□ 0.37
RNF4-215ENST00000511843 FAM177BA6PVY3 158 aa17.38■□□□□ 0.37
RNF4-215ENST00000511843 PROSER3Q2NL68 480 aa17.38■□□□□ 0.37
RNF4-215ENST00000511843 ARHGAP27Q6ZUM4 889 aa17.38■□□□□ 0.37
RNF4-215ENST00000511843 C2CD5Q86YS7 1000 aa17.38■□□□□ 0.37
RNF4-215ENST00000511843 TNRC6CQ9HCJ0 1690 aaKnown RBP17.37■□□□□ 0.37
RNF4-215ENST00000511843 NPHP1O15259 732 aa17.37■□□□□ 0.37
RNF4-215ENST00000511843 DALRD3Q5D0E6 543 aaKnown RBP17.37■□□□□ 0.37
RNF4-215ENST00000511843 CNBD1Q8NA66 436 aa17.37■□□□□ 0.37
RNF4-215ENST00000511843 ZBTB3Q9H5J0 574 aa17.37■□□□□ 0.37
RNF4-215ENST00000511843 BABAM1Q9NWV8 329 aa17.37■□□□□ 0.37
RNF4-215ENST00000511843 ZNF652Q9Y2D9 606 aa17.37■□□□□ 0.37
RNF4-215ENST00000511843 ATP10DQ9P241 1426 aa17.37■□□□□ 0.37
RNF4-215ENST00000511843 ANKRD36CQ5JPF3 1778 aa17.36■□□□□ 0.37
RNF4-215ENST00000511843 SLX4Q8IY92 1834 aa17.36■□□□□ 0.37
RNF4-215ENST00000511843 PDIA6Q15084 440 aa17.36■□□□□ 0.37
RNF4-215ENST00000511843 CLEC4GQ6UXB4 293 aa17.36■□□□□ 0.37
RNF4-215ENST00000511843 NIP7Q9Y221 180 aaKnown RBP eCLIP17.36■□□□□ 0.37
RNF4-215ENST00000511843 ARFGEF2Q9Y6D5 1785 aa17.35■□□□□ 0.37
RNF4-215ENST00000511843 LRP10Q7Z4F1 713 aa17.35■□□□□ 0.37
RNF4-215ENST00000511843 NBPF5PQ86XG9 351 aaPredicted RBP17.35■□□□□ 0.37
RNF4-215ENST00000511843 MBIPQ9NS73 344 aa17.35■□□□□ 0.37
RNF4-215ENST00000511843 MAP3K15Q6ZN16 1313 aa17.35■□□□□ 0.37
RNF4-215ENST00000511843 ADCY9O60503 1353 aa17.35■□□□□ 0.37
RNF4-215ENST00000511843 KIF6Q6ZMV9 814 aa17.34■□□□□ 0.37
RNF4-215ENST00000511843 ZNF526Q8TF50 670 aaPredicted RBP17.34■□□□□ 0.37
RNF4-215ENST00000511843 BRIP1Q9BX63 1249 aa17.34■□□□□ 0.37
RNF4-215ENST00000511843 ERBB4Q15303 1308 aa17.33■□□□□ 0.36
RNF4-215ENST00000511843 H0YIN7 160 aa17.33■□□□□ 0.36
RNF4-215ENST00000511843 GPTP24298 496 aa17.33■□□□□ 0.36
RNF4-215ENST00000511843 ST5P78524 1137 aa17.33■□□□□ 0.36
RNF4-215ENST00000511843 ZNF622Q969S3 477 aaKnown RBP eCLIP17.33■□□□□ 0.36
RNF4-215ENST00000511843 CFAP44Q96MT7 982 aa17.33■□□□□ 0.36
RNF4-215ENST00000511843 ZNF219Q9P2Y4 722 aaPredicted RBP17.32■□□□□ 0.36
RNF4-215ENST00000511843 UBN2Q6ZU65 1347 aa17.31■□□□□ 0.36
RNF4-215ENST00000511843 ERVV-1B6SEH8 477 aa17.31■□□□□ 0.36
RNF4-215ENST00000511843 ZNF853P0CG23 659 aa17.31■□□□□ 0.36
RNF4-215ENST00000511843 PDE6BP35913 854 aa17.31■□□□□ 0.36
RNF4-215ENST00000511843 RASSF7Q02833 373 aa17.31■□□□□ 0.36
RNF4-215ENST00000511843 AIMP1Q12904 312 aaKnown RBP17.31■□□□□ 0.36
RNF4-215ENST00000511843 TTLL6Q8N841 843 aa17.31■□□□□ 0.36
RNF4-215ENST00000511843 CHPF2Q9P2E5 772 aa17.31■□□□□ 0.36
RNF4-215ENST00000511843 FER1L6Q2WGJ9 1857 aa17.31■□□□□ 0.36
RNF4-215ENST00000511843 ABCC12Q96J65 1359 aa17.3■□□□□ 0.36
RNF4-215ENST00000511843 ELL2O00472 640 aaPredicted RBP17.3■□□□□ 0.36
RNF4-215ENST00000511843 HDGFL1Q5TGJ6 251 aa17.3■□□□□ 0.36
RNF4-215ENST00000511843 DUSP27Q5VZP5 1158 aa17.3■□□□□ 0.36
RNF4-215ENST00000511843 NUTM1Q86Y26 1132 aa17.3■□□□□ 0.36
RNF4-215ENST00000511843 XAGE3Q8WTP9 111 aa17.3■□□□□ 0.36
RNF4-215ENST00000511843 IFT57Q9NWB7 429 aa17.3■□□□□ 0.36
RNF4-215ENST00000511843 TIAM2Q8IVF5 1701 aa17.3■□□□□ 0.36
RNF4-215ENST00000511843 RGL2O15211 777 aa17.29■□□□□ 0.36
RNF4-215ENST00000511843 C9orf131Q5VYM1 1079 aa17.29■□□□□ 0.36
RNF4-215ENST00000511843 COPS6Q7L5N1 327 aa17.29■□□□□ 0.36
RNF4-215ENST00000511843 SALL2Q9Y467 1007 aaPredicted RBP17.29■□□□□ 0.36
RNF4-215ENST00000511843 LAMB2P55268 1798 aa17.29■□□□□ 0.36
RNF4-215ENST00000511843 SRGNP10124 158 aa17.28■□□□□ 0.36
RNF4-215ENST00000511843 GNAI1P63096 354 aa17.28■□□□□ 0.36
RNF4-215ENST00000511843 TPTE2Q6XPS3 522 aa17.28■□□□□ 0.36
RNF4-215ENST00000511843 GIGYF2Q6Y7W6 1299 aaKnown RBP17.28■□□□□ 0.36
RNF4-215ENST00000511843 TSR2Q969E8 191 aaKnown RBP17.28■□□□□ 0.36
RNF4-215ENST00000511843 ZNF428Q96B54 188 aa17.28■□□□□ 0.36
RNF4-215ENST00000511843 DDX21Q9NR30 783 aaKnown RBP eCLIP17.28■□□□□ 0.36
RNF4-215ENST00000511843 GTF2E1P29083 439 aaPredicted RBP17.27■□□□□ 0.36
RNF4-215ENST00000511843 CALD1Q05682 793 aaKnown RBP17.27■□□□□ 0.36
RNF4-215ENST00000511843 ERFEQ4G0M1 354 aa17.27■□□□□ 0.36
RNF4-215ENST00000511843 SUSD4Q5VX71 490 aa17.27■□□□□ 0.36
RNF4-215ENST00000511843 ZNF34Q8IZ26 560 aa17.27■□□□□ 0.36
RNF4-215ENST00000511843 FAM9BQ8IZU0 186 aa17.27■□□□□ 0.36
RNF4-215ENST00000511843 DICER1Q9UPY3 1922 aaKnown RBP17.27■□□□□ 0.35
RNF4-215ENST00000511843 C21orf2O43822 256 aa17.26■□□□□ 0.35
RNF4-215ENST00000511843 PRELPP51888 382 aa17.26■□□□□ 0.35
RNF4-215ENST00000511843 WWC1Q8IX03 1113 aa17.26■□□□□ 0.35
RNF4-215ENST00000511843 C8orf58Q8NAV2 365 aa17.26■□□□□ 0.35
RNF4-215ENST00000511843 RNF181Q9P0P0 153 aa17.26■□□□□ 0.35
RNF4-215ENST00000511843 HOXB7P09629 217 aa17.25■□□□□ 0.35
RNF4-215ENST00000511843 STYK1Q6J9G0 422 aa17.25■□□□□ 0.35
RNF4-215ENST00000511843 PRPF40BQ6NWY9 871 aaKnown RBP17.25■□□□□ 0.35
RNF4-215ENST00000511843 MASTLQ96GX5 879 aa17.25■□□□□ 0.35
RNF4-215ENST00000511843 GPBP1L1Q9HC44 474 aaPredicted RBP17.25■□□□□ 0.35
RNF4-215ENST00000511843 TAF1P21675 1872 aa17.24■□□□□ 0.35
RNF4-215ENST00000511843 NFKBIEO00221 500 aa17.24■□□□□ 0.35
RNF4-215ENST00000511843 NTSR2O95665 410 aa17.24■□□□□ 0.35
RNF4-215ENST00000511843 TSPYL6Q8N831 410 aa17.24■□□□□ 0.35
RNF4-215ENST00000511843 NYXQ9GZU5 481 aa17.24■□□□□ 0.35
RNF4-215ENST00000511843 PDZRN3Q9UPQ7 1066 aa17.24■□□□□ 0.35
RNF4-215ENST00000511843 CCDC27Q2M243 656 aa17.23■□□□□ 0.35
RNF4-215ENST00000511843 OLFM4Q6UX06 510 aa17.23■□□□□ 0.35
RNF4-215ENST00000511843 CNKSR1Q969H4 720 aa17.23■□□□□ 0.35
RNF4-215ENST00000511843 DBF4Q9UBU7 674 aaPredicted RBP17.23■□□□□ 0.35
RNF4-215ENST00000511843 DDX60Q8IY21 1712 aaKnown RBP17.23■□□□□ 0.35
RNF4-215ENST00000511843 KLRG2A4D1S0 409 aaPredicted RBP17.22■□□□□ 0.35
RNF4-215ENST00000511843 NPR1P16066 1061 aa17.22■□□□□ 0.35
RNF4-215ENST00000511843 C3orf67Q6ZVT6 689 aa17.22■□□□□ 0.35
RNF4-215ENST00000511843 IBTKQ9P2D0 1353 aaPredicted RBP17.22■□□□□ 0.35
RNF4-215ENST00000511843 TCERG1O14776 1098 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms