RNA–Protein interactions for RNA: ENST00000510866.5

KDM3B-207, Transcript of lysine demethylase 3B, humanhuman

TSL 1 (best)

Gene KDM3B, Length 6,324 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-207ENST00000510866 CTCFLQ8NI51 663 aaPredicted RBP8.42□□□□□ -1.06
KDM3B-207ENST00000510866 CUL5Q93034 780 aa8.42□□□□□ -1.06
KDM3B-207ENST00000510866 CDCA7Q9BWT1 371 aaPredicted RBP8.42□□□□□ -1.06
KDM3B-207ENST00000510866 HDAC9Q9UKV0 1011 aa8.42□□□□□ -1.06
KDM3B-207ENST00000510866 MYO5CQ9NQX4 1742 aa8.42□□□□□ -1.06
KDM3B-207ENST00000510866 TARBP1Q13395 1621 aaKnown RBP8.41□□□□□ -1.06
KDM3B-207ENST00000510866 GNPATO15228 680 aa8.41□□□□□ -1.06
KDM3B-207ENST00000510866 FAM98CQ17RN3 349 aaKnown RBP8.41□□□□□ -1.06
KDM3B-207ENST00000510866 CAVIN1Q6NZI2 390 aaKnown RBP8.41□□□□□ -1.06
KDM3B-207ENST00000510866 EYA1Q99502 592 aa8.41□□□□□ -1.06
KDM3B-207ENST00000510866 BMP2KQ9NSY1 1161 aaPredicted RBP8.41□□□□□ -1.06
KDM3B-207ENST00000510866 CABP5Q9NP86 173 aa8.41□□□□□ -1.06
KDM3B-207ENST00000510866 STK32BQ9NY57 414 aa8.41□□□□□ -1.06
KDM3B-207ENST00000510866 SLAIN2Q9P270 581 aa8.41□□□□□ -1.06
KDM3B-207ENST00000510866 UQCRFS1P1P0C7P4 283 aa8.41□□□□□ -1.06
KDM3B-207ENST00000510866 EVI5LQ96CN4 794 aa8.41□□□□□ -1.06
KDM3B-207ENST00000510866 USP21Q9UK80 565 aa8.41□□□□□ -1.06
KDM3B-207ENST00000510866 SLC12A7Q9Y666 1083 aa8.41□□□□□ -1.06
KDM3B-207ENST00000510866 TRAPPC3LQ5T215 181 aa8.41□□□□□ -1.06
KDM3B-207ENST00000510866 TPTE2Q6XPS3 522 aa8.41□□□□□ -1.06
KDM3B-207ENST00000510866 TANGO6Q9C0B7 1094 aa8.41□□□□□ -1.06
KDM3B-207ENST00000510866 ZFYVE9O95405 1425 aa8.41□□□□□ -1.06
KDM3B-207ENST00000510866 KRT85P78386 507 aa8.41□□□□□ -1.06
KDM3B-207ENST00000510866 RNMTO43148 476 aaKnown RBP8.4□□□□□ -1.06
KDM3B-207ENST00000510866 MBD3O95983 291 aa8.4□□□□□ -1.06
KDM3B-207ENST00000510866 RNF214Q8ND24 703 aa8.4□□□□□ -1.06
KDM3B-207ENST00000510866 PUS7Q96PZ0 661 aaKnown RBP8.4□□□□□ -1.06
KDM3B-207ENST00000510866 ECHDC1Q9NTX5 307 aa8.4□□□□□ -1.06
KDM3B-207ENST00000510866 CCNL1Q9UK58 526 aaPredicted RBP8.4□□□□□ -1.06
KDM3B-207ENST00000510866 CHD1O14646 1710 aa8.4□□□□□ -1.06
KDM3B-207ENST00000510866 IFIT3O14879 490 aaKnown RBP8.4□□□□□ -1.06
KDM3B-207ENST00000510866 TTLL5Q6EMB2 1281 aa8.4□□□□□ -1.06
KDM3B-207ENST00000510866 ZNF804AQ7Z570 1209 aa8.4□□□□□ -1.06
KDM3B-207ENST00000510866 SCLT1Q96NL6 688 aa8.4□□□□□ -1.06
KDM3B-207ENST00000510866 DACH1Q9UI36 760 aa8.4□□□□□ -1.06
KDM3B-207ENST00000510866 MAPKBP1O60336 1514 aa8.4□□□□□ -1.07
KDM3B-207ENST00000510866 KSR2Q6VAB6 950 aa8.4□□□□□ -1.07
KDM3B-207ENST00000510866 C16orf71Q8IYS4 520 aaPredicted RBP8.4□□□□□ -1.07
KDM3B-207ENST00000510866 PDCL3Q9H2J4 239 aa8.4□□□□□ -1.07
KDM3B-207ENST00000510866 CEP131Q9UPN4 1083 aa8.4□□□□□ -1.07
KDM3B-207ENST00000510866 CCDC196A0A1B0GTZ2 297 aa8.4□□□□□ -1.07
KDM3B-207ENST00000510866 GRM1Q13255 1194 aa8.4□□□□□ -1.07
KDM3B-207ENST00000510866 SPATA32Q96LK8 384 aa8.4□□□□□ -1.07
KDM3B-207ENST00000510866 CRNKL1Q9BZJ0 848 aaKnown RBP8.4□□□□□ -1.07
KDM3B-207ENST00000510866 IQSEC3Q9UPP2 1182 aaPredicted RBP8.4□□□□□ -1.07
KDM3B-207ENST00000510866 MAP3K19Q56UN5 1328 aa8.4□□□□□ -1.07
KDM3B-207ENST00000510866 TMEM2Q9UHN6 1383 aa8.39□□□□□ -1.07
KDM3B-207ENST00000510866 PDE4BQ07343 736 aa8.39□□□□□ -1.07
KDM3B-207ENST00000510866 CATIPQ7Z7H3 387 aa8.39□□□□□ -1.07
KDM3B-207ENST00000510866 CCDC83Q8IWF9 413 aa8.39□□□□□ -1.07
KDM3B-207ENST00000510866 CCDC82Q8N4S0 544 aa8.39□□□□□ -1.07
KDM3B-207ENST00000510866 TSPY26PQ9H489 355 aa8.39□□□□□ -1.07
KDM3B-207ENST00000510866 SAMD9Q5K651 1589 aa8.39□□□□□ -1.07
KDM3B-207ENST00000510866 YEATS2Q9ULM3 1422 aa8.39□□□□□ -1.07
KDM3B-207ENST00000510866 CEP57L1Q8IYX8 460 aa8.39□□□□□ -1.07
KDM3B-207ENST00000510866 PAF1Q8N7H5 531 aa8.39□□□□□ -1.07
KDM3B-207ENST00000510866 SMARCE1Q969G3 411 aa8.39□□□□□ -1.07
KDM3B-207ENST00000510866 TRIM5Q9C035 493 aa8.39□□□□□ -1.07
KDM3B-207ENST00000510866 ARHGEF10O15013 1369 aa8.39□□□□□ -1.07
KDM3B-207ENST00000510866 COL17A1Q9UMD9 1497 aaPredicted RBP8.39□□□□□ -1.07
KDM3B-207ENST00000510866 HMGB1P09429 215 aaKnown RBP8.39□□□□□ -1.07
KDM3B-207ENST00000510866 C8orf58Q8NAV2 365 aa8.39□□□□□ -1.07
KDM3B-207ENST00000510866 EHMT1Q9H9B1 1298 aa8.39□□□□□ -1.07
KDM3B-207ENST00000510866 GRM8O00222 908 aa8.39□□□□□ -1.07
KDM3B-207ENST00000510866 OGFOD1Q8N543 542 aa8.39□□□□□ -1.07
KDM3B-207ENST00000510866 ZGPATQ8N5A5 531 aaKnown RBP8.39□□□□□ -1.07
KDM3B-207ENST00000510866 TNMDQ9H2S6 317 aa8.39□□□□□ -1.07
KDM3B-207ENST00000510866 TSPY2A6NKD2 308 aa8.39□□□□□ -1.07
KDM3B-207ENST00000510866 GOLGA8AA7E2F4 631 aa8.39□□□□□ -1.07
KDM3B-207ENST00000510866 GOLGA8BA8MQT2 603 aa8.39□□□□□ -1.07
KDM3B-207ENST00000510866 LMBR1LQ6UX01 489 aa8.39□□□□□ -1.07
KDM3B-207ENST00000510866 CFAP45Q9UL16 551 aa8.39□□□□□ -1.07
KDM3B-207ENST00000510866 CFAP65Q6ZU64 1925 aaKnown RBP8.38□□□□□ -1.07
KDM3B-207ENST00000510866 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.38□□□□□ -1.07
KDM3B-207ENST00000510866 SSRP1Q08945 709 aaKnown RBP8.38□□□□□ -1.07
KDM3B-207ENST00000510866 ATP2B3Q16720 1220 aa8.38□□□□□ -1.07
KDM3B-207ENST00000510866 IRS4O14654 1257 aaPredicted RBP8.38□□□□□ -1.07
KDM3B-207ENST00000510866 RIMBP2O15034 1052 aa8.38□□□□□ -1.07
KDM3B-207ENST00000510866 ALDH1L1O75891 902 aa8.38□□□□□ -1.07
KDM3B-207ENST00000510866 RBM17Q96I25 401 aaKnown RBP8.38□□□□□ -1.07
KDM3B-207ENST00000510866 KAT14Q9H8E8 782 aa8.38□□□□□ -1.07
KDM3B-207ENST00000510866 PZPP20742 1482 aa8.38□□□□□ -1.07
KDM3B-207ENST00000510866 CYP7A1P22680 504 aa8.38□□□□□ -1.07
KDM3B-207ENST00000510866 PICALMQ13492 652 aa8.38□□□□□ -1.07
KDM3B-207ENST00000510866 VAT1LQ9HCJ6 419 aa8.38□□□□□ -1.07
KDM3B-207ENST00000510866 TRAK2O60296 914 aa8.38□□□□□ -1.07
KDM3B-207ENST00000510866 SERPINC1P01008 464 aa8.38□□□□□ -1.07
KDM3B-207ENST00000510866 NFKBIBQ15653 356 aa8.38□□□□□ -1.07
KDM3B-207ENST00000510866 RBM26Q5T8P6 1007 aaKnown RBP8.38□□□□□ -1.07
KDM3B-207ENST00000510866 TSHZ3Q63HK5 1081 aa8.38□□□□□ -1.07
KDM3B-207ENST00000510866 PPP4R3AQ6IN85 833 aa8.38□□□□□ -1.07
KDM3B-207ENST00000510866 ADGBQ8N7X0 1667 aa8.37□□□□□ -1.07
KDM3B-207ENST00000510866 EDC4Q6P2E9 1401 aaKnown RBP8.37□□□□□ -1.07
KDM3B-207ENST00000510866 HAND2P61296 217 aa8.37□□□□□ -1.07
KDM3B-207ENST00000510866 MFSD6Q6ZSS7 791 aa8.37□□□□□ -1.07
KDM3B-207ENST00000510866 JDP2Q8WYK2 163 aa8.37□□□□□ -1.07
KDM3B-207ENST00000510866 NLRP5P59047 1200 aa8.37□□□□□ -1.07
KDM3B-207ENST00000510866 CAGE1Q8TC20 777 aa8.37□□□□□ -1.07
KDM3B-207ENST00000510866 ADGRL2O95490 1459 aa8.37□□□□□ -1.07
KDM3B-207ENST00000510866 MRPL50Q8N5N7 158 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 416.1 ms