RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 PIK3R4Q99570 1358 aa17.58■□□□□ 0.4
USP38-202ENST00000510377 CCT2P78371 535 aaKnown RBP17.57■□□□□ 0.4
USP38-202ENST00000510377 SYNE3Q6ZMZ3 975 aa17.57■□□□□ 0.4
USP38-202ENST00000510377 PIBF1Q8WXW3 757 aa17.57■□□□□ 0.4
USP38-202ENST00000510377 IQGAP1P46940 1657 aa17.57■□□□□ 0.4
USP38-202ENST00000510377 TYRO3Q06418 890 aa17.57■□□□□ 0.4
USP38-202ENST00000510377 STK38Q15208 465 aa17.57■□□□□ 0.4
USP38-202ENST00000510377 FAM200AQ8TCP9 573 aa17.57■□□□□ 0.4
USP38-202ENST00000510377 SGSM2O43147 1006 aa17.57■□□□□ 0.4
USP38-202ENST00000510377 RASEFQ8IZ41 740 aa17.57■□□□□ 0.4
USP38-202ENST00000510377 CCDC94Q9BW85 323 aaPredicted RBP17.57■□□□□ 0.4
USP38-202ENST00000510377 CWF19L2Q2TBE0 894 aaKnown RBP17.56■□□□□ 0.4
USP38-202ENST00000510377 ERICH4A6NGS2 130 aa17.56■□□□□ 0.4
USP38-202ENST00000510377 FAM135BQ49AJ0 1406 aa17.56■□□□□ 0.4
USP38-202ENST00000510377 IBTKQ9P2D0 1353 aaPredicted RBP17.56■□□□□ 0.4
USP38-202ENST00000510377 MNS1Q8NEH6 495 aa17.56■□□□□ 0.4
USP38-202ENST00000510377 MYRIPQ8NFW9 859 aa17.56■□□□□ 0.4
USP38-202ENST00000510377 PTCH1Q13635 1447 aa17.56■□□□□ 0.4
USP38-202ENST00000510377 TNRQ92752 1358 aa17.56■□□□□ 0.4
USP38-202ENST00000510377 HSPA4P34932 840 aa17.55■□□□□ 0.4
USP38-202ENST00000510377 EVI5LQ96CN4 794 aa17.55■□□□□ 0.4
USP38-202ENST00000510377 EDC4Q6P2E9 1401 aaKnown RBP17.55■□□□□ 0.4
USP38-202ENST00000510377 USP44Q9H0E7 712 aa17.55■□□□□ 0.4
USP38-202ENST00000510377 RIOK3O14730 519 aaKnown RBP17.55■□□□□ 0.4
USP38-202ENST00000510377 NMIQ13287 307 aaPredicted RBP17.55■□□□□ 0.4
USP38-202ENST00000510377 NAT10Q9H0A0 1025 aaKnown RBP17.55■□□□□ 0.4
USP38-202ENST00000510377 PTPN14Q15678 1187 aa17.54■□□□□ 0.4
USP38-202ENST00000510377 PDILTQ8N807 584 aa17.54■□□□□ 0.4
USP38-202ENST00000510377 CFAP45Q9UL16 551 aa17.54■□□□□ 0.4
USP38-202ENST00000510377 RAPGEF4Q8WZA2 1011 aa17.54■□□□□ 0.4
USP38-202ENST00000510377 BIN1O00499 593 aa17.54■□□□□ 0.4
USP38-202ENST00000510377 ATP2B1P20020 1258 aa17.54■□□□□ 0.4
USP38-202ENST00000510377 TERF1P54274 439 aa17.54■□□□□ 0.4
USP38-202ENST00000510377 MAPK8IP2Q13387 824 aaPredicted RBP17.53■□□□□ 0.4
USP38-202ENST00000510377 SHROOM2Q13796 1616 aa17.53■□□□□ 0.4
USP38-202ENST00000510377 RAD50Q92878 1312 aa17.53■□□□□ 0.4
USP38-202ENST00000510377 RAB11FIP4Q86YS3 637 aa17.53■□□□□ 0.4
USP38-202ENST00000510377 ZCCHC11Q5TAX3 1644 aaKnown RBP17.53■□□□□ 0.4
USP38-202ENST00000510377 NUTM2BA6NNL0 878 aaPredicted RBP17.53■□□□□ 0.4
USP38-202ENST00000510377 NUTM2EB1AL46 878 aaPredicted RBP17.53■□□□□ 0.4
USP38-202ENST00000510377 U2AF2P26368 475 aaKnown RBP eCLIP17.53■□□□□ 0.4
USP38-202ENST00000510377 RUFY3Q7L099 469 aa17.53■□□□□ 0.4
USP38-202ENST00000510377 NUTM2AQ8IVF1 878 aaPredicted RBP17.53■□□□□ 0.4
USP38-202ENST00000510377 FAM227BQ96M60 508 aa17.53■□□□□ 0.4
USP38-202ENST00000510377 CREB3L3Q68CJ9 461 aa17.53■□□□□ 0.4
USP38-202ENST00000510377 ISM2Q6H9L7 571 aa17.53■□□□□ 0.4
USP38-202ENST00000510377 DDX19AQ9NUU7 478 aaKnown RBP17.53■□□□□ 0.4
USP38-202ENST00000510377 CEP57L1Q8IYX8 460 aa17.52■□□□□ 0.4
USP38-202ENST00000510377 BRF1Q92994 677 aa17.52■□□□□ 0.4
USP38-202ENST00000510377 CCDC85AQ96PX6 553 aaPredicted RBP17.52■□□□□ 0.4
USP38-202ENST00000510377 RNF17Q9BXT8 1623 aaKnown RBP17.52■□□□□ 0.4
USP38-202ENST00000510377 PIP4K2AP48426 406 aaPredicted RBP17.52■□□□□ 0.4
USP38-202ENST00000510377 MEX3CQ5U5Q3 659 aaKnown RBP17.52■□□□□ 0.4
USP38-202ENST00000510377 RALYLQ86SE5 291 aaKnown RBP17.52■□□□□ 0.4
USP38-202ENST00000510377 ZNF396Q96N95 335 aaPredicted RBP17.52■□□□□ 0.4
USP38-202ENST00000510377 DBF4Q9UBU7 674 aaPredicted RBP17.52■□□□□ 0.4
USP38-202ENST00000510377 EFCAB6Q5THR3 1501 aa17.52■□□□□ 0.39
USP38-202ENST00000510377 PTH1RQ03431 593 aa17.52■□□□□ 0.39
USP38-202ENST00000510377 CYP2E1P05181 493 aaPredicted RBP17.51■□□□□ 0.39
USP38-202ENST00000510377 KLHDC4Q8TBB5 520 aa17.51■□□□□ 0.39
USP38-202ENST00000510377 MYD88Q99836 296 aa17.51■□□□□ 0.39
USP38-202ENST00000510377 NCOA3Q9Y6Q9 1424 aa17.51■□□□□ 0.39
USP38-202ENST00000510377 CUL4AQ13619 759 aa17.51■□□□□ 0.39
USP38-202ENST00000510377 AK9Q5TCS8 1911 aa17.51■□□□□ 0.39
USP38-202ENST00000510377 CDC37L1Q7L3B6 337 aa17.51■□□□□ 0.39
USP38-202ENST00000510377 PDLIM2Q96JY6 352 aa17.51■□□□□ 0.39
USP38-202ENST00000510377 LRMPQ12912 555 aa17.5■□□□□ 0.39
USP38-202ENST00000510377 LARP1Q6PKG0 1096 aaKnown RBP17.5■□□□□ 0.39
USP38-202ENST00000510377 BCL2L12Q9HB09 334 aa17.5■□□□□ 0.39
USP38-202ENST00000510377 PYCARDQ9ULZ3 195 aa17.5■□□□□ 0.39
USP38-202ENST00000510377 FKBP4Q02790 459 aaKnown RBP eCLIP17.5■□□□□ 0.39
USP38-202ENST00000510377 CLEC17AQ6ZS10 378 aa17.5■□□□□ 0.39
USP38-202ENST00000510377 DDX46Q7L014 1031 aaKnown RBP17.5■□□□□ 0.39
USP38-202ENST00000510377 NDUFB9Q9Y6M9 179 aa17.5■□□□□ 0.39
USP38-202ENST00000510377 CEP152O94986 1710 aa17.5■□□□□ 0.39
USP38-202ENST00000510377 LIG1P18858 919 aa17.5■□□□□ 0.39
USP38-202ENST00000510377 ADCK5Q3MIX3 580 aa17.5■□□□□ 0.39
USP38-202ENST00000510377 KIF24Q5T7B8 1368 aa17.5■□□□□ 0.39
USP38-202ENST00000510377 FSIP1Q8NA03 581 aa17.5■□□□□ 0.39
USP38-202ENST00000510377 TULP4Q9NRJ4 1543 aa17.5■□□□□ 0.39
USP38-202ENST00000510377 CGNQ9P2M7 1197 aaKnown RBP17.5■□□□□ 0.39
USP38-202ENST00000510377 TNNT3P45378 269 aaPredicted RBP17.49■□□□□ 0.39
USP38-202ENST00000510377 QRICH2Q9H0J4 1663 aa17.49■□□□□ 0.39
USP38-202ENST00000510377 LRRC7Q96NW7 1537 aa17.49■□□□□ 0.39
USP38-202ENST00000510377 NFXL1Q6ZNB6 911 aa17.49■□□□□ 0.39
USP38-202ENST00000510377 CCAR1Q8IX12 1150 aaKnown RBP17.49■□□□□ 0.39
USP38-202ENST00000510377 OSBPL3Q9H4L5 887 aa17.49■□□□□ 0.39
USP38-202ENST00000510377 LARGE1O95461 756 aa17.49■□□□□ 0.39
USP38-202ENST00000510377 KRT32Q14532 448 aa17.49■□□□□ 0.39
USP38-202ENST00000510377 VPS53Q5VIR6 699 aa17.49■□□□□ 0.39
USP38-202ENST00000510377 LRRC59Q96AG4 307 aaKnown RBP17.49■□□□□ 0.39
USP38-202ENST00000510377 SYTL4Q96C24 671 aaPredicted RBP17.49■□□□□ 0.39
USP38-202ENST00000510377 YEATS2Q9ULM3 1422 aa17.48■□□□□ 0.39
USP38-202ENST00000510377 SERPINC1P01008 464 aa17.48■□□□□ 0.39
USP38-202ENST00000510377 TRDNQ13061 729 aa17.48■□□□□ 0.39
USP38-202ENST00000510377 ME3Q16798 604 aa17.48■□□□□ 0.39
USP38-202ENST00000510377 CEP135Q66GS9 1140 aa17.48■□□□□ 0.39
USP38-202ENST00000510377 TRERF1Q96PN7 1200 aa17.48■□□□□ 0.39
USP38-202ENST00000510377 NEK1Q96PY6 1258 aa17.48■□□□□ 0.39
USP38-202ENST00000510377 KIAA0232Q92628 1395 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms