RNA–Protein interactions for RNA: ENST00000510187.5

SQSTM1-213, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-213ENST00000510187 MYL6BP14649 208 aa19.84■□□□□ 0.77
SQSTM1-213ENST00000510187 ATP6V1AP38606 617 aa19.84■□□□□ 0.77
SQSTM1-213ENST00000510187 FKBP5Q13451 457 aaPredicted RBP19.84■□□□□ 0.77
SQSTM1-213ENST00000510187 SBF2Q86WG5 1849 aa19.83■□□□□ 0.77
SQSTM1-213ENST00000510187 PIP4K2AP48426 406 aaPredicted RBP19.83■□□□□ 0.77
SQSTM1-213ENST00000510187 C1orf115Q9H7X2 142 aa19.83■□□□□ 0.77
SQSTM1-213ENST00000510187 ERBB4Q15303 1308 aa19.83■□□□□ 0.76
SQSTM1-213ENST00000510187 CACNA1FO60840 1977 aa19.83■□□□□ 0.76
SQSTM1-213ENST00000510187 BTAF1O14981 1849 aa19.82■□□□□ 0.76
SQSTM1-213ENST00000510187 TRIM37O94972 964 aa19.82■□□□□ 0.76
SQSTM1-213ENST00000510187 A1BGP04217 495 aa19.82■□□□□ 0.76
SQSTM1-213ENST00000510187 EP400Q96L91 3159 aa19.81■□□□□ 0.76
SQSTM1-213ENST00000510187 MCM4P33991 863 aa19.81■□□□□ 0.76
SQSTM1-213ENST00000510187 DCTPP1Q9H773 170 aa19.81■□□□□ 0.76
SQSTM1-213ENST00000510187 CIZ1Q9ULV3 898 aaPredicted RBP19.81■□□□□ 0.76
SQSTM1-213ENST00000510187 NBPF26B4DH59 902 aa19.8■□□□□ 0.76
SQSTM1-213ENST00000510187 CYP19A1P11511 503 aaPredicted RBP19.8■□□□□ 0.76
SQSTM1-213ENST00000510187 L1TD1Q5T7N2 865 aaKnown RBP19.8■□□□□ 0.76
SQSTM1-213ENST00000510187 NBPF14Q5TI25 921 aa19.8■□□□□ 0.76
SQSTM1-213ENST00000510187 NBPF10Q6P3W6 841 aaKnown RBP19.8■□□□□ 0.76
SQSTM1-213ENST00000510187 NBPF15Q8N660 670 aa19.8■□□□□ 0.76
SQSTM1-213ENST00000510187 ATP10DQ9P241 1426 aa19.8■□□□□ 0.76
SQSTM1-213ENST00000510187 F6X3S4 739 aa19.79■□□□□ 0.76
SQSTM1-213ENST00000510187 CDC45O75419 566 aa19.79■□□□□ 0.76
SQSTM1-213ENST00000510187 DDIT3P35638 169 aa19.79■□□□□ 0.76
SQSTM1-213ENST00000510187 AIMP1Q12904 312 aaKnown RBP19.79■□□□□ 0.76
SQSTM1-213ENST00000510187 RPAP2Q8IXW5 612 aaPredicted RBP19.79■□□□□ 0.76
SQSTM1-213ENST00000510187 ANKRD44Q8N8A2 993 aa19.79■□□□□ 0.76
SQSTM1-213ENST00000510187 BRPF3Q9ULD4 1205 aa19.79■□□□□ 0.76
SQSTM1-213ENST00000510187 N4BP2Q86UW6 1770 aaPredicted RBP19.79■□□□□ 0.76
SQSTM1-213ENST00000510187 ITPK1Q13572 414 aa19.79■□□□□ 0.76
SQSTM1-213ENST00000510187 TBC1D9Q6ZT07 1266 aa19.79■□□□□ 0.76
SQSTM1-213ENST00000510187 LRP10Q7Z4F1 713 aa19.79■□□□□ 0.76
SQSTM1-213ENST00000510187 TJP1Q07157 1748 aa19.78■□□□□ 0.76
SQSTM1-213ENST00000510187 SLC4A10Q6U841 1118 aa19.78■□□□□ 0.76
SQSTM1-213ENST00000510187 XAGE3Q8WTP9 111 aa19.78■□□□□ 0.76
SQSTM1-213ENST00000510187 COPS6Q7L5N1 327 aa19.77■□□□□ 0.76
SQSTM1-213ENST00000510187 PI4KAP2A4QPH2 592 aa19.76■□□□□ 0.75
SQSTM1-213ENST00000510187 DDX58O95786 925 aaKnown RBP19.76■□□□□ 0.75
SQSTM1-213ENST00000510187 PI4KAP1Q8N8J0 262 aa19.76■□□□□ 0.75
SQSTM1-213ENST00000510187 DDX11L8A8MPP1 907 aa19.76■□□□□ 0.75
SQSTM1-213ENST00000510187 KCNQ4P56696 695 aa19.76■□□□□ 0.75
SQSTM1-213ENST00000510187 CCNL1Q9UK58 526 aaPredicted RBP19.76■□□□□ 0.75
SQSTM1-213ENST00000510187 KSR2Q6VAB6 950 aa19.75■□□□□ 0.75
SQSTM1-213ENST00000510187 KIF2CQ99661 725 aa19.75■□□□□ 0.75
SQSTM1-213ENST00000510187 ZBTB1Q9Y2K1 713 aa19.75■□□□□ 0.75
SQSTM1-213ENST00000510187 ZNF330Q9Y3S2 320 aaPredicted RBP19.75■□□□□ 0.75
SQSTM1-213ENST00000510187 ADCY9O60503 1353 aa19.75■□□□□ 0.75
SQSTM1-213ENST00000510187 CRKLP46109 303 aaKnown RBP19.74■□□□□ 0.75
SQSTM1-213ENST00000510187 PLEKHM2Q8IWE5 1019 aa19.74■□□□□ 0.75
SQSTM1-213ENST00000510187 DNAAF4Q8WXU2 420 aa19.74■□□□□ 0.75
SQSTM1-213ENST00000510187 MAP3K2Q9Y2U5 619 aa19.74■□□□□ 0.75
SQSTM1-213ENST00000510187 CICQ96RK0 1608 aaPredicted RBP19.74■□□□□ 0.75
SQSTM1-213ENST00000510187 CCT4P50991 539 aaKnown RBP19.73■□□□□ 0.75
SQSTM1-213ENST00000510187 RIC3Q7Z5B4 369 aa19.73■□□□□ 0.75
SQSTM1-213ENST00000510187 LINC00116Q8NCU8 138 aa19.73■□□□□ 0.75
SQSTM1-213ENST00000510187 CCDC87Q9NVE4 849 aa19.73■□□□□ 0.75
SQSTM1-213ENST00000510187 ZNF831Q5JPB2 1677 aa19.73■□□□□ 0.75
SQSTM1-213ENST00000510187 TTC22Q5TAA0 569 aa19.73■□□□□ 0.75
SQSTM1-213ENST00000510187 CEP85Q6P2H3 762 aa19.73■□□□□ 0.75
SQSTM1-213ENST00000510187 INTS5Q6P9B9 1019 aaKnown RBP19.73■□□□□ 0.75
SQSTM1-213ENST00000510187 ANKRD13DQ6ZTN6 518 aa19.73■□□□□ 0.75
SQSTM1-213ENST00000510187 SPRYD3Q8NCJ5 442 aa19.73■□□□□ 0.75
SQSTM1-213ENST00000510187 GSPT1P15170 499 aaKnown RBP19.71■□□□□ 0.75
SQSTM1-213ENST00000510187 PTMSP20962 102 aa19.71■□□□□ 0.75
SQSTM1-213ENST00000510187 IL6STP40189 918 aaPredicted RBP19.71■□□□□ 0.75
SQSTM1-213ENST00000510187 TTLL7Q6ZT98 887 aa19.71■□□□□ 0.75
SQSTM1-213ENST00000510187 LY75O60449 1722 aa19.71■□□□□ 0.75
SQSTM1-213ENST00000510187 PXDNLA1KZ92 1463 aa19.71■□□□□ 0.75
SQSTM1-213ENST00000510187 APBA3O96018 575 aa19.71■□□□□ 0.75
SQSTM1-213ENST00000510187 K7ELQ4 463 aaPredicted RBP19.7■□□□□ 0.74
SQSTM1-213ENST00000510187 PLBD2Q8NHP8 589 aa19.7■□□□□ 0.74
SQSTM1-213ENST00000510187 ARXQ96QS3 562 aa19.7■□□□□ 0.74
SQSTM1-213ENST00000510187 HMMRO75330 724 aa19.69■□□□□ 0.74
SQSTM1-213ENST00000510187 COL5A3P25940 1745 aaPredicted RBP19.69■□□□□ 0.74
SQSTM1-213ENST00000510187 CNTNAP4Q9C0A0 1308 aa19.69■□□□□ 0.74
SQSTM1-213ENST00000510187 FSD2A1L4K1 749 aa19.68■□□□□ 0.74
SQSTM1-213ENST00000510187 SLC27A3Q5K4L6 730 aa19.68■□□□□ 0.74
SQSTM1-213ENST00000510187 BEND3Q5T5X7 828 aa19.68■□□□□ 0.74
SQSTM1-213ENST00000510187 KIF6Q6ZMV9 814 aa19.68■□□□□ 0.74
SQSTM1-213ENST00000510187 SRCIN1Q9C0H9 1055 aa19.68■□□□□ 0.74
SQSTM1-213ENST00000510187 LRRC4BQ9NT99 713 aa19.68■□□□□ 0.74
SQSTM1-213ENST00000510187 TRAK2O60296 914 aa19.68■□□□□ 0.74
SQSTM1-213ENST00000510187 EIF5P55010 431 aaKnown RBP19.68■□□□□ 0.74
SQSTM1-213ENST00000510187 RAB3GAP1Q15042 981 aa19.68■□□□□ 0.74
SQSTM1-213ENST00000510187 ZBTB3Q9H5J0 574 aa19.68■□□□□ 0.74
SQSTM1-213ENST00000510187 ISY1Q9ULR0 285 aaKnown RBP19.68■□□□□ 0.74
SQSTM1-213ENST00000510187 PLSCR1O15162 318 aa19.67■□□□□ 0.74
SQSTM1-213ENST00000510187 NEXNQ0ZGT2 675 aa19.67■□□□□ 0.74
SQSTM1-213ENST00000510187 RABEP1Q15276 862 aa19.67■□□□□ 0.74
SQSTM1-213ENST00000510187 GBP4Q96PP9 640 aa19.67■□□□□ 0.74
SQSTM1-213ENST00000510187 METTL22Q9BUU2 404 aaPredicted RBP19.67■□□□□ 0.74
SQSTM1-213ENST00000510187 TXNRD1Q16881 649 aa19.66■□□□□ 0.74
SQSTM1-213ENST00000510187 RC3H1Q5TC82 1133 aaKnown RBP19.66■□□□□ 0.74
SQSTM1-213ENST00000510187 CASC1Q6TDU7 716 aa19.66■□□□□ 0.74
SQSTM1-213ENST00000510187 RREB1Q92766 1687 aa19.66■□□□□ 0.74
SQSTM1-213ENST00000510187 MYH14Q7Z406 1995 aaKnown RBP19.65■□□□□ 0.74
SQSTM1-213ENST00000510187 GOLGA6L3A6NEY3 463 aa19.65■□□□□ 0.74
SQSTM1-213ENST00000510187 LINS1Q8NG48 757 aa19.65■□□□□ 0.74
SQSTM1-213ENST00000510187 MEIS3Q99687 375 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms