RNA–Protein interactions for RNA: ENST00000510129.5

UBE2D3-229, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-229ENST00000510129 PDE6BP35913 854 aa27.74■■■□□ 2.03
UBE2D3-229ENST00000510129 ST5P78524 1137 aa27.74■■■□□ 2.03
UBE2D3-229ENST00000510129 DALRD3Q5D0E6 543 aaKnown RBP27.74■■■□□ 2.03
UBE2D3-229ENST00000510129 MAP3K15Q6ZN16 1313 aa27.73■■■□□ 2.03
UBE2D3-229ENST00000510129 MYL6BP14649 208 aa27.73■■■□□ 2.03
UBE2D3-229ENST00000510129 CHMP4AQ9BY43 222 aa27.73■■■□□ 2.03
UBE2D3-229ENST00000510129 H0YIN7 160 aa27.72■■■□□ 2.03
UBE2D3-229ENST00000510129 ZNF853P0CG23 659 aa27.72■■■□□ 2.03
UBE2D3-229ENST00000510129 PRR5LQ6MZQ0 368 aa27.72■■■□□ 2.03
UBE2D3-229ENST00000510129 NBPF5PQ86XG9 351 aaPredicted RBP27.72■■■□□ 2.03
UBE2D3-229ENST00000510129 NIP7Q9Y221 180 aaKnown RBP eCLIP27.72■■■□□ 2.03
UBE2D3-229ENST00000510129 TPTE2Q6XPS3 522 aa27.71■■■□□ 2.03
UBE2D3-229ENST00000510129 NGEFQ8N5V2 710 aa27.71■■■□□ 2.03
UBE2D3-229ENST00000510129 MBIPQ9NS73 344 aa27.71■■■□□ 2.03
UBE2D3-229ENST00000510129 WWC3Q9ULE0 1092 aa27.71■■■□□ 2.03
UBE2D3-229ENST00000510129 ARFGEF1Q9Y6D6 1849 aa27.7■■■□□ 2.02
UBE2D3-229ENST00000510129 ATP10DQ9P241 1426 aa27.69■■■□□ 2.02
UBE2D3-229ENST00000510129 DLEC1Q9Y238 1755 aa27.69■■■□□ 2.02
UBE2D3-229ENST00000510129 CHRNA5P30532 468 aa27.69■■■□□ 2.02
UBE2D3-229ENST00000510129 C2CD5Q86YS7 1000 aa27.69■■■□□ 2.02
UBE2D3-229ENST00000510129 NYXQ9GZU5 481 aa27.68■■■□□ 2.02
UBE2D3-229ENST00000510129 DDX21Q9NR30 783 aaKnown RBP eCLIP27.68■■■□□ 2.02
UBE2D3-229ENST00000510129 PDIA6Q15084 440 aa27.67■■■□□ 2.02
UBE2D3-229ENST00000510129 HDGFL1Q5TGJ6 251 aa27.67■■■□□ 2.02
UBE2D3-229ENST00000510129 HLFQ16534 295 aa27.66■■■□□ 2.02
UBE2D3-229ENST00000510129 TTLL6Q8N841 843 aa27.66■■■□□ 2.02
UBE2D3-229ENST00000510129 ZNF784Q8NCA9 323 aaPredicted RBP27.66■■■□□ 2.02
UBE2D3-229ENST00000510129 DBF4Q9UBU7 674 aaPredicted RBP27.66■■■□□ 2.02
UBE2D3-229ENST00000510129 DUSP27Q5VZP5 1158 aa27.65■■■□□ 2.02
UBE2D3-229ENST00000510129 GIGYF2Q6Y7W6 1299 aaKnown RBP27.65■■■□□ 2.02
UBE2D3-229ENST00000510129 TTLL7Q6ZT98 887 aa27.65■■■□□ 2.02
UBE2D3-229ENST00000510129 NUP98P52948 1817 aa27.64■■■□□ 2.02
UBE2D3-229ENST00000510129 GTF2E1P29083 439 aaPredicted RBP27.64■■■□□ 2.02
UBE2D3-229ENST00000510129 ARHGAP27Q6ZUM4 889 aa27.64■■■□□ 2.02
UBE2D3-229ENST00000510129 LRP10Q7Z4F1 713 aa27.64■■■□□ 2.02
UBE2D3-229ENST00000510129 WWC1Q8IX03 1113 aa27.64■■■□□ 2.02
UBE2D3-229ENST00000510129 ZBTB3Q9H5J0 574 aa27.64■■■□□ 2.02
UBE2D3-229ENST00000510129 IL16Q14005 1332 aa27.64■■■□□ 2.01
UBE2D3-229ENST00000510129 IBTKQ9P2D0 1353 aaPredicted RBP27.63■■■□□ 2.01
UBE2D3-229ENST00000510129 KRT24Q2M2I5 525 aa27.63■■■□□ 2.01
UBE2D3-229ENST00000510129 HSP90AB3PQ58FF7 597 aa27.63■■■□□ 2.01
UBE2D3-229ENST00000510129 ANKRD31Q8N7Z5 1873 aa27.63■■■□□ 2.01
UBE2D3-229ENST00000510129 HYPKQ9NX55 129 aa27.62■■■□□ 2.01
UBE2D3-229ENST00000510129 PARP10Q53GL7 1025 aa27.61■■■□□ 2.01
UBE2D3-229ENST00000510129 STYK1Q6J9G0 422 aa27.61■■■□□ 2.01
UBE2D3-229ENST00000510129 NECTIN2Q92692 538 aa27.61■■■□□ 2.01
UBE2D3-229ENST00000510129 CNKSR1Q969H4 720 aa27.61■■■□□ 2.01
UBE2D3-229ENST00000510129 CHPF2Q9P2E5 772 aa27.61■■■□□ 2.01
UBE2D3-229ENST00000510129 PROSER3Q2NL68 480 aa27.6■■■□□ 2.01
UBE2D3-229ENST00000510129 COPS6Q7L5N1 327 aa27.6■■■□□ 2.01
UBE2D3-229ENST00000510129 PPP1R42Q7Z4L9 355 aa27.59■■■□□ 2.01
UBE2D3-229ENST00000510129 ZNF34Q8IZ26 560 aa27.59■■■□□ 2.01
UBE2D3-229ENST00000510129 FAM9BQ8IZU0 186 aa27.59■■■□□ 2.01
UBE2D3-229ENST00000510129 XAGE3Q8WTP9 111 aa27.59■■■□□ 2.01
UBE2D3-229ENST00000510129 ZNF622Q969S3 477 aaKnown RBP eCLIP27.59■■■□□ 2.01
UBE2D3-229ENST00000510129 MASTLQ96GX5 879 aa27.59■■■□□ 2.01
UBE2D3-229ENST00000510129 SRGNP10124 158 aa27.58■■■□□ 2.01
UBE2D3-229ENST00000510129 WDR63Q8IWG1 891 aa27.58■■■□□ 2.01
UBE2D3-229ENST00000510129 KLRG2A4D1S0 409 aaPredicted RBP27.57■■■□□ 2
UBE2D3-229ENST00000510129 ANXA1P04083 346 aa27.57■■■□□ 2
UBE2D3-229ENST00000510129 RNF123Q5XPI4 1314 aa27.57■■■□□ 2
UBE2D3-229ENST00000510129 ADCY9O60503 1353 aa27.57■■■□□ 2
UBE2D3-229ENST00000510129 AIMP1Q12904 312 aaKnown RBP27.56■■■□□ 2
UBE2D3-229ENST00000510129 CCDC24Q8N4L8 307 aa27.56■■■□□ 2
UBE2D3-229ENST00000510129 RIC1Q4ADV7 1423 aa27.56■■■□□ 2
UBE2D3-229ENST00000510129 FAM177BA6PVY3 158 aa27.55■■■□□ 2
UBE2D3-229ENST00000510129 NPR1P16066 1061 aa27.55■■■□□ 2
UBE2D3-229ENST00000510129 GPTP24298 496 aa27.55■■■□□ 2
UBE2D3-229ENST00000510129 SOGA3Q5TF21 947 aa27.55■■■□□ 2
UBE2D3-229ENST00000510129 CCDC30Q5VVM6 783 aa27.55■■■□□ 2
UBE2D3-229ENST00000510129 COL11A2P13942 1736 aaPredicted RBP27.54■■■□□ 2
UBE2D3-229ENST00000510129 PLBD2Q8NHP8 589 aa27.54■■■□□ 2
UBE2D3-229ENST00000510129 UBN2Q6ZU65 1347 aa27.53■■■□□ 2
UBE2D3-229ENST00000510129 ANKRD13DQ6ZTN6 518 aa27.53■■■□□ 2
UBE2D3-229ENST00000510129 TCIRG1Q13488 830 aa27.52■■■□□ 2
UBE2D3-229ENST00000510129 C8orf58Q8NAV2 365 aa27.52■■■□□ 2
UBE2D3-229ENST00000510129 UTP14AQ9BVJ6 771 aaKnown RBP27.52■■■□□ 2
UBE2D3-229ENST00000510129 ANKRD36CQ5JPF3 1778 aa27.51■■□□□ 1.99
UBE2D3-229ENST00000510129 ELL2O00472 640 aaPredicted RBP27.51■■□□□ 1.99
UBE2D3-229ENST00000510129 ALDH1B1P30837 517 aa27.51■■□□□ 1.99
UBE2D3-229ENST00000510129 SUSD4Q5VX71 490 aa27.51■■□□□ 1.99
UBE2D3-229ENST00000510129 UTRNP46939 3433 aa27.51■■□□□ 1.99
UBE2D3-229ENST00000510129 GOLGB1Q14789 3259 aaKnown RBP27.51■■□□□ 1.99
UBE2D3-229ENST00000510129 ARFGEF2Q9Y6D5 1785 aa27.5■■□□□ 1.99
UBE2D3-229ENST00000510129 TSR2Q969E8 191 aaKnown RBP27.5■■□□□ 1.99
UBE2D3-229ENST00000510129 NTSR2O95665 410 aa27.49■■□□□ 1.99
UBE2D3-229ENST00000510129 GOLGA2Q08379 1002 aa27.49■■□□□ 1.99
UBE2D3-229ENST00000510129 ERFEQ4G0M1 354 aa27.49■■□□□ 1.99
UBE2D3-229ENST00000510129 PRPF40BQ6NWY9 871 aaKnown RBP27.49■■□□□ 1.99
UBE2D3-229ENST00000510129 ZC3H4Q9UPT8 1303 aaKnown RBP27.48■■□□□ 1.99
UBE2D3-229ENST00000510129 CCER2I3L3R5 266 aa27.48■■□□□ 1.99
UBE2D3-229ENST00000510129 CRY2Q49AN0 593 aa27.48■■□□□ 1.99
UBE2D3-229ENST00000510129 NUTM1Q86Y26 1132 aa27.48■■□□□ 1.99
UBE2D3-229ENST00000510129 STK31Q9BXU1 1019 aa27.48■■□□□ 1.99
UBE2D3-229ENST00000510129 GPBP1L1Q9HC44 474 aaPredicted RBP27.48■■□□□ 1.99
UBE2D3-229ENST00000510129 DDX58O95786 925 aaKnown RBP27.47■■□□□ 1.99
UBE2D3-229ENST00000510129 C9orf131Q5VYM1 1079 aa27.47■■□□□ 1.99
UBE2D3-229ENST00000510129 LMNB1P20700 586 aa27.46■■□□□ 1.99
UBE2D3-229ENST00000510129 TWISTNBQ3B726 338 aaPredicted RBP27.46■■□□□ 1.99
UBE2D3-229ENST00000510129 SLC10A5Q5PT55 438 aa27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms