RNA–Protein interactions for RNA: ENST00000509093.5

COPS4-206, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2 BASIC

Gene COPS4, Length 2,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-206ENST00000509093 KIF2CQ99661 725 aa13.67□□□□□ -0.22
COPS4-206ENST00000509093 CCDC9Q9Y3X0 531 aaKnown RBP13.67□□□□□ -0.22
COPS4-206ENST00000509093 SPATA31A5Q5VU36 1347 aa13.67□□□□□ -0.22
COPS4-206ENST00000509093 SPATA31A7Q8IWB4 1347 aa13.67□□□□□ -0.22
COPS4-206ENST00000509093 PI4KAP2A4QPH2 592 aa13.67□□□□□ -0.22
COPS4-206ENST00000509093 EXOC5O00471 708 aa13.67□□□□□ -0.22
COPS4-206ENST00000509093 BAG4O95429 457 aaKnown RBP13.67□□□□□ -0.22
COPS4-206ENST00000509093 SNRPA1P09661 255 aaKnown RBP13.67□□□□□ -0.22
COPS4-206ENST00000509093 PI4KAP1Q8N8J0 262 aa13.67□□□□□ -0.22
COPS4-206ENST00000509093 CHMP4BQ9H444 224 aaKnown RBP13.67□□□□□ -0.22
COPS4-206ENST00000509093 ADCY9O60503 1353 aa13.67□□□□□ -0.22
COPS4-206ENST00000509093 GLI3P10071 1580 aa13.67□□□□□ -0.22
COPS4-206ENST00000509093 HSPA1LP34931 641 aa13.66□□□□□ -0.22
COPS4-206ENST00000509093 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.66□□□□□ -0.22
COPS4-206ENST00000509093 LRP6O75581 1613 aa13.66□□□□□ -0.22
COPS4-206ENST00000509093 PTCD1O75127 700 aaKnown RBP13.66□□□□□ -0.22
COPS4-206ENST00000509093 MYL6BP14649 208 aa13.66□□□□□ -0.22
COPS4-206ENST00000509093 AIMP1Q12904 312 aaKnown RBP13.66□□□□□ -0.22
COPS4-206ENST00000509093 PIGBQ92521 554 aa13.66□□□□□ -0.22
COPS4-206ENST00000509093 NGLY1Q96IV0 654 aa13.66□□□□□ -0.22
COPS4-206ENST00000509093 ZKSCAN5Q9Y2L8 839 aa13.66□□□□□ -0.22
COPS4-206ENST00000509093 CACNA1FO60840 1977 aa13.65□□□□□ -0.22
COPS4-206ENST00000509093 CD2BP2O95400 341 aaKnown RBP13.65□□□□□ -0.22
COPS4-206ENST00000509093 NUCB1Q02818 461 aa13.65□□□□□ -0.22
COPS4-206ENST00000509093 DDX21Q9NR30 783 aaKnown RBP eCLIP13.65□□□□□ -0.22
COPS4-206ENST00000509093 ATP10DQ9P241 1426 aa13.65□□□□□ -0.22
COPS4-206ENST00000509093 BMP2KLQ5H9B9 411 aa13.65□□□□□ -0.22
COPS4-206ENST00000509093 SASS6Q6UVJ0 657 aa13.65□□□□□ -0.22
COPS4-206ENST00000509093 TMOD3Q9NYL9 352 aa13.65□□□□□ -0.22
COPS4-206ENST00000509093 ASAP1Q9ULH1 1129 aa13.65□□□□□ -0.22
COPS4-206ENST00000509093 BCL9LQ86UU0 1499 aa13.64□□□□□ -0.23
COPS4-206ENST00000509093 CEP85Q6P2H3 762 aa13.64□□□□□ -0.23
COPS4-206ENST00000509093 UNC5CLQ8IV45 518 aa13.64□□□□□ -0.23
COPS4-206ENST00000509093 DNAAF4Q8WXU2 420 aa13.64□□□□□ -0.23
COPS4-206ENST00000509093 CHMP4AQ9BY43 222 aa13.64□□□□□ -0.23
COPS4-206ENST00000509093 FOXD4L1Q9NU39 408 aa13.64□□□□□ -0.23
COPS4-206ENST00000509093 HYPKQ9NX55 129 aa13.64□□□□□ -0.23
COPS4-206ENST00000509093 KCPQ6ZWJ8 1503 aa13.64□□□□□ -0.23
COPS4-206ENST00000509093 WNK3Q9BYP7 1800 aa13.64□□□□□ -0.23
COPS4-206ENST00000509093 ZSCAN23Q3MJ62 389 aa13.64□□□□□ -0.23
COPS4-206ENST00000509093 BEND3Q5T5X7 828 aa13.64□□□□□ -0.23
COPS4-206ENST00000509093 UTP14CQ5TAP6 766 aaKnown RBP13.64□□□□□ -0.23
COPS4-206ENST00000509093 LRP10Q7Z4F1 713 aa13.64□□□□□ -0.23
COPS4-206ENST00000509093 USP44Q9H0E7 712 aa13.64□□□□□ -0.23
COPS4-206ENST00000509093 MAP3K2Q9Y2U5 619 aa13.64□□□□□ -0.23
COPS4-206ENST00000509093 ANKRD44Q8N8A2 993 aa13.63□□□□□ -0.23
COPS4-206ENST00000509093 XAGE3Q8WTP9 111 aa13.63□□□□□ -0.23
COPS4-206ENST00000509093 THRAP3Q9Y2W1 955 aaKnown RBP13.63□□□□□ -0.23
COPS4-206ENST00000509093 TNS2Q63HR2 1409 aa13.63□□□□□ -0.23
COPS4-206ENST00000509093 DDB1Q16531 1140 aa13.62□□□□□ -0.23
COPS4-206ENST00000509093 KSR2Q6VAB6 950 aa13.62□□□□□ -0.23
COPS4-206ENST00000509093 MARCH10Q8NA82 808 aaPredicted RBP13.62□□□□□ -0.23
COPS4-206ENST00000509093 ATG3Q9NT62 314 aa13.62□□□□□ -0.23
COPS4-206ENST00000509093 NWD2Q9ULI1 1742 aa13.62□□□□□ -0.23
COPS4-206ENST00000509093 PAPPAQ13219 1627 aa13.62□□□□□ -0.23
COPS4-206ENST00000509093 SRCIN1Q9C0H9 1055 aa13.62□□□□□ -0.23
COPS4-206ENST00000509093 RBSNQ9H1K0 784 aa13.62□□□□□ -0.23
COPS4-206ENST00000509093 PXDNLA1KZ92 1463 aa13.62□□□□□ -0.23
COPS4-206ENST00000509093 NBPF26B4DH59 902 aa13.61□□□□□ -0.23
COPS4-206ENST00000509093 A1BGP04217 495 aa13.61□□□□□ -0.23
COPS4-206ENST00000509093 PRIM1P49642 420 aaKnown RBP13.61□□□□□ -0.23
COPS4-206ENST00000509093 FAM98CQ17RN3 349 aaKnown RBP13.61□□□□□ -0.23
COPS4-206ENST00000509093 NBPF14Q5TI25 921 aa13.61□□□□□ -0.23
COPS4-206ENST00000509093 CAVIN1Q6NZI2 390 aaKnown RBP13.61□□□□□ -0.23
COPS4-206ENST00000509093 NBPF10Q6P3W6 841 aaKnown RBP13.61□□□□□ -0.23
COPS4-206ENST00000509093 COPS6Q7L5N1 327 aa13.61□□□□□ -0.23
COPS4-206ENST00000509093 NBPF15Q8N660 670 aa13.61□□□□□ -0.23
COPS4-206ENST00000509093 SYTL4Q96C24 671 aaPredicted RBP13.61□□□□□ -0.23
COPS4-206ENST00000509093 UBR2Q8IWV8 1755 aa13.61□□□□□ -0.23
COPS4-206ENST00000509093 DMTNQ08495 405 aa13.61□□□□□ -0.23
COPS4-206ENST00000509093 BARGINQ6ZT62 677 aa13.61□□□□□ -0.23
COPS4-206ENST00000509093 CHD1LQ86WJ1 897 aa13.61□□□□□ -0.23
COPS4-206ENST00000509093 FNBP4Q8N3X1 1017 aaPredicted RBP13.61□□□□□ -0.23
COPS4-206ENST00000509093 CCDC94Q9BW85 323 aaPredicted RBP13.61□□□□□ -0.23
COPS4-206ENST00000509093 CDCA7Q9BWT1 371 aaPredicted RBP13.61□□□□□ -0.23
COPS4-206ENST00000509093 LNPKQ9C0E8 428 aa13.61□□□□□ -0.23
COPS4-206ENST00000509093 CCDC39Q9UFE4 941 aa13.61□□□□□ -0.23
COPS4-206ENST00000509093 SPATA31A6Q5VVP1 1343 aa13.61□□□□□ -0.23
COPS4-206ENST00000509093 GNAI2P04899 355 aa13.6□□□□□ -0.23
COPS4-206ENST00000509093 NUCB2P80303 420 aa13.6□□□□□ -0.23
COPS4-206ENST00000509093 CWF19L2Q2TBE0 894 aaKnown RBP13.6□□□□□ -0.23
COPS4-206ENST00000509093 ACSBG1Q96GR2 724 aa13.6□□□□□ -0.23
COPS4-206ENST00000509093 LMBRD1Q9NUN5 540 aa13.6□□□□□ -0.23
COPS4-206ENST00000509093 LRRFIP2Q9Y608 721 aaKnown RBP13.6□□□□□ -0.23
COPS4-206ENST00000509093 NBPF7P0C2Y1 421 aaPredicted RBP13.6□□□□□ -0.23
COPS4-206ENST00000509093 VPS72Q15906 364 aa13.6□□□□□ -0.23
COPS4-206ENST00000509093 ANKRD45Q5TZF3 282 aa13.6□□□□□ -0.23
COPS4-206ENST00000509093 MCTP1Q6DN14 999 aa13.6□□□□□ -0.23
COPS4-206ENST00000509093 RPAP2Q8IXW5 612 aaPredicted RBP13.6□□□□□ -0.23
COPS4-206ENST00000509093 ITGB4P16144 1822 aa13.59□□□□□ -0.23
COPS4-206ENST00000509093 BCL9O00512 1426 aa13.59□□□□□ -0.23
COPS4-206ENST00000509093 CYP2E1P05181 493 aaPredicted RBP13.59□□□□□ -0.23
COPS4-206ENST00000509093 GNAI3P08754 354 aa13.59□□□□□ -0.23
COPS4-206ENST00000509093 USP21Q9UK80 565 aa13.59□□□□□ -0.23
COPS4-206ENST00000509093 N4BP2Q86UW6 1770 aaPredicted RBP13.59□□□□□ -0.23
COPS4-206ENST00000509093 RIC3Q7Z5B4 369 aa13.59□□□□□ -0.23
COPS4-206ENST00000509093 GCC1Q96CN9 775 aa13.59□□□□□ -0.23
COPS4-206ENST00000509093 SLC4A9Q96Q91 983 aa13.59□□□□□ -0.23
COPS4-206ENST00000509093 RBM42Q9BTD8 480 aaKnown RBP13.59□□□□□ -0.23
COPS4-206ENST00000509093 DCTPP1Q9H773 170 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms