RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 RBM19Q9Y4C8 960 aaKnown RBP5.98□□□□□ -1.45
UBE2D3-226ENST00000508635 CEP170Q5SW79 1584 aa5.97□□□□□ -1.45
UBE2D3-226ENST00000508635 RNF144AP50876 292 aaPredicted RBP5.97□□□□□ -1.45
UBE2D3-226ENST00000508635 SRPK2P78362 688 aaKnown RBP5.97□□□□□ -1.45
UBE2D3-226ENST00000508635 ANKMY2Q8IV38 441 aa5.97□□□□□ -1.45
UBE2D3-226ENST00000508635 IGF1RP08069 1367 aa5.96□□□□□ -1.45
UBE2D3-226ENST00000508635 SENP3-EIF4A1A0A087X0R7 540 aa5.96□□□□□ -1.46
UBE2D3-226ENST00000508635 CDC14CA4D256 554 aa5.96□□□□□ -1.46
UBE2D3-226ENST00000508635 SLC35F4A4IF30 521 aa5.96□□□□□ -1.46
UBE2D3-226ENST00000508635 FAM196BA6NMK8 535 aa5.96□□□□□ -1.46
UBE2D3-226ENST00000508635 DKK1O94907 266 aa5.96□□□□□ -1.46
UBE2D3-226ENST00000508635 PHKA2P46019 1235 aa5.96□□□□□ -1.46
UBE2D3-226ENST00000508635 SMTNP53814 917 aa5.96□□□□□ -1.46
UBE2D3-226ENST00000508635 POU4F2Q12837 409 aa5.96□□□□□ -1.46
UBE2D3-226ENST00000508635 TMEM214Q6NUQ4 689 aaKnown RBP5.96□□□□□ -1.46
UBE2D3-226ENST00000508635 LYSMD3Q7Z3D4 306 aa5.96□□□□□ -1.46
UBE2D3-226ENST00000508635 TNS4Q8IZW8 715 aa5.96□□□□□ -1.46
UBE2D3-226ENST00000508635 SIX5Q8N196 739 aa5.96□□□□□ -1.46
UBE2D3-226ENST00000508635 TSEN2Q8NCE0 465 aaKnown RBP5.96□□□□□ -1.46
UBE2D3-226ENST00000508635 ZSCAN10Q96SZ4 725 aaPredicted RBP5.96□□□□□ -1.46
UBE2D3-226ENST00000508635 FHDC1Q9C0D6 1143 aaPredicted RBP5.96□□□□□ -1.46
UBE2D3-226ENST00000508635 GRIP2Q9C0E4 1043 aa5.96□□□□□ -1.46
UBE2D3-226ENST00000508635 NOVA2Q9UNW9 492 aaKnown RBP5.96□□□□□ -1.46
UBE2D3-226ENST00000508635 HRH3Q9Y5N1 445 aa5.96□□□□□ -1.46
UBE2D3-226ENST00000508635 A6NJY4 79 aa5.95□□□□□ -1.46
UBE2D3-226ENST00000508635 WASLO00401 505 aaPredicted RBP5.95□□□□□ -1.46
UBE2D3-226ENST00000508635 BACH1O14867 736 aa5.95□□□□□ -1.46
UBE2D3-226ENST00000508635 GPC1P35052 558 aa5.95□□□□□ -1.46
UBE2D3-226ENST00000508635 SEC13P55735 322 aa5.95□□□□□ -1.46
UBE2D3-226ENST00000508635 TBCELQ5QJ74 424 aa5.95□□□□□ -1.46
UBE2D3-226ENST00000508635 ERCC6L2Q5T890 1561 aa5.95□□□□□ -1.46
UBE2D3-226ENST00000508635 KIF27Q86VH2 1401 aa5.95□□□□□ -1.46
UBE2D3-226ENST00000508635 NEDD1Q8NHV4 660 aa5.95□□□□□ -1.46
UBE2D3-226ENST00000508635 FAM200AQ8TCP9 573 aa5.95□□□□□ -1.46
UBE2D3-226ENST00000508635 HINFPQ9BQA5 517 aa5.95□□□□□ -1.46
UBE2D3-226ENST00000508635 GOLGA2P5Q9HBQ8 144 aa5.95□□□□□ -1.46
UBE2D3-226ENST00000508635 LRRC4BQ9NT99 713 aa5.95□□□□□ -1.46
UBE2D3-226ENST00000508635 USP3Q9Y6I4 520 aa5.95□□□□□ -1.46
UBE2D3-226ENST00000508635 SHROOM2Q13796 1616 aa5.95□□□□□ -1.46
UBE2D3-226ENST00000508635 GTF2E1P29083 439 aaPredicted RBP5.94□□□□□ -1.46
UBE2D3-226ENST00000508635 LCE1DQ5T752 114 aa5.94□□□□□ -1.46
UBE2D3-226ENST00000508635 GAS2L2Q8NHY3 880 aa5.94□□□□□ -1.46
UBE2D3-226ENST00000508635 STK32AQ8WU08 396 aa5.94□□□□□ -1.46
UBE2D3-226ENST00000508635 SLC4A9Q96Q91 983 aa5.94□□□□□ -1.46
UBE2D3-226ENST00000508635 ARXQ96QS3 562 aa5.94□□□□□ -1.46
UBE2D3-226ENST00000508635 ATG7O95352 703 aa5.93□□□□□ -1.46
UBE2D3-226ENST00000508635 GNASQ5JWF2 1037 aa5.93□□□□□ -1.46
UBE2D3-226ENST00000508635 NBPF10Q6P3W6 841 aaKnown RBP5.93□□□□□ -1.46
UBE2D3-226ENST00000508635 NBPF15Q8N660 670 aa5.93□□□□□ -1.46
UBE2D3-226ENST00000508635 KRTAP17-1Q9BYP8 105 aa5.93□□□□□ -1.46
UBE2D3-226ENST00000508635 ZMIZ1Q9ULJ6 1067 aa5.93□□□□□ -1.46
UBE2D3-226ENST00000508635 PARP3Q9Y6F1 533 aa5.93□□□□□ -1.46
UBE2D3-226ENST00000508635 PRG4Q92954 1404 aaPredicted RBP5.92□□□□□ -1.46
UBE2D3-226ENST00000508635 BCRP11274 1271 aa5.92□□□□□ -1.46
UBE2D3-226ENST00000508635 MTFR1Q15390 333 aa5.92□□□□□ -1.46
UBE2D3-226ENST00000508635 C4orf17Q53FE4 359 aa5.92□□□□□ -1.46
UBE2D3-226ENST00000508635 ZMYM1Q5SVZ6 1142 aa5.92□□□□□ -1.46
UBE2D3-226ENST00000508635 TAS1R3Q7RTX0 852 aa5.92□□□□□ -1.46
UBE2D3-226ENST00000508635 PPARGC1BQ86YN6 1023 aaKnown RBP5.92□□□□□ -1.46
UBE2D3-226ENST00000508635 SLC9A9Q8IVB4 645 aa5.92□□□□□ -1.46
UBE2D3-226ENST00000508635 TSPAN10Q9H1Z9 355 aaPredicted RBP5.92□□□□□ -1.46
UBE2D3-226ENST00000508635 CUEDC1Q9NWM3 386 aaPredicted RBP5.92□□□□□ -1.46
UBE2D3-226ENST00000508635 CABP1Q9NZU7 370 aa5.92□□□□□ -1.46
UBE2D3-226ENST00000508635 ACIN1Q9UKV3 1341 aaKnown RBP5.92□□□□□ -1.46
UBE2D3-226ENST00000508635 RUSC2Q8N2Y8 1516 aa5.91□□□□□ -1.46
UBE2D3-226ENST00000508635 CARNS1A5YM72 827 aa5.91□□□□□ -1.46
UBE2D3-226ENST00000508635 CDK2AP1O14519 115 aa5.91□□□□□ -1.46
UBE2D3-226ENST00000508635 PPP1R15AO75807 674 aaPredicted RBP5.91□□□□□ -1.46
UBE2D3-226ENST00000508635 PLA2G4AP47712 749 aa5.91□□□□□ -1.46
UBE2D3-226ENST00000508635 EPHA4P54764 986 aa5.91□□□□□ -1.46
UBE2D3-226ENST00000508635 TMEM164Q5U3C3 297 aa5.91□□□□□ -1.46
UBE2D3-226ENST00000508635 KRTAP19-1Q8IUB9 90 aa5.91□□□□□ -1.46
UBE2D3-226ENST00000508635 RHBDD1Q8TEB9 315 aa5.91□□□□□ -1.46
UBE2D3-226ENST00000508635 GAS2L1Q99501 681 aaPredicted RBP5.91□□□□□ -1.46
UBE2D3-226ENST00000508635 TIMMDC1Q9NPL8 285 aa5.91□□□□□ -1.46
UBE2D3-226ENST00000508635 SCHIP1Q9P0W5 487 aaPredicted RBP5.91□□□□□ -1.46
UBE2D3-226ENST00000508635 IQSEC3Q9UPP2 1182 aaPredicted RBP5.91□□□□□ -1.46
UBE2D3-226ENST00000508635 CUL7Q14999 1698 aa5.91□□□□□ -1.46
UBE2D3-226ENST00000508635 CARMIL1Q5VZK9 1371 aa5.91□□□□□ -1.46
UBE2D3-226ENST00000508635 KIAA0586Q9BVV6 1533 aa5.9□□□□□ -1.46
UBE2D3-226ENST00000508635 KRBA1A5PL33 1030 aa5.9□□□□□ -1.46
UBE2D3-226ENST00000508635 SPATA31C2B4DYI2 1134 aa5.9□□□□□ -1.46
UBE2D3-226ENST00000508635 M0R2N6 131 aa5.9□□□□□ -1.46
UBE2D3-226ENST00000508635 ELOAQ14241 798 aaKnown RBP5.9□□□□□ -1.46
UBE2D3-226ENST00000508635 SCG3Q8WXD2 468 aaKnown RBP5.9□□□□□ -1.46
UBE2D3-226ENST00000508635 AIDAQ96BJ3 306 aa5.9□□□□□ -1.46
UBE2D3-226ENST00000508635 PRIMPOLQ96LW4 560 aa5.9□□□□□ -1.46
UBE2D3-226ENST00000508635 NIFKQ9BYG3 293 aaKnown RBP5.9□□□□□ -1.46
UBE2D3-226ENST00000508635 PPP1R12BO60237 982 aaPredicted RBP5.89□□□□□ -1.47
UBE2D3-226ENST00000508635 PRMT3O60678 531 aa5.89□□□□□ -1.47
UBE2D3-226ENST00000508635 GAS6Q14393 721 aa5.89□□□□□ -1.47
UBE2D3-226ENST00000508635 SH3PXD2AQ5TCZ1 1133 aa5.89□□□□□ -1.47
UBE2D3-226ENST00000508635 RIPOR1Q6ZS17 1223 aa5.89□□□□□ -1.47
UBE2D3-226ENST00000508635 ZDHHC1Q8WTX9 485 aa5.89□□□□□ -1.47
UBE2D3-226ENST00000508635 GPAMQ9HCL2 828 aa5.89□□□□□ -1.47
UBE2D3-226ENST00000508635 ZNF232Q9UNY5 417 aa5.89□□□□□ -1.47
UBE2D3-226ENST00000508635 ATAD2Q6PL18 1390 aa5.89□□□□□ -1.47
UBE2D3-226ENST00000508635 C21orf2O43822 256 aa5.88□□□□□ -1.47
UBE2D3-226ENST00000508635 CSB-PGBD3P0DP91 1061 aa5.88□□□□□ -1.47
UBE2D3-226ENST00000508635 ZNF295-AS1Q8N0V1 137 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms