RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 SUCLG2Q96I99 432 aa13.22□□□□□ -0.29
LIN54-207ENST00000508171 RBSNQ9H1K0 784 aa13.22□□□□□ -0.29
LIN54-207ENST00000508171 HYPKQ9NX55 129 aa13.22□□□□□ -0.29
LIN54-207ENST00000508171 USP42Q9H9J4 1324 aaKnown RBP13.22□□□□□ -0.29
LIN54-207ENST00000508171 SIPA1L3O60292 1781 aaPredicted RBP13.22□□□□□ -0.29
LIN54-207ENST00000508171 ERBB3P21860 1342 aa13.21□□□□□ -0.29
LIN54-207ENST00000508171 TTC41PQ6P2S7 1318 aa13.21□□□□□ -0.29
LIN54-207ENST00000508171 GRM8O00222 908 aa13.21□□□□□ -0.29
LIN54-207ENST00000508171 EPB41L2O43491 1005 aaKnown RBP13.21□□□□□ -0.29
LIN54-207ENST00000508171 PTH1RQ03431 593 aa13.21□□□□□ -0.29
LIN54-207ENST00000508171 KIAA1211Q6ZU35 1233 aa13.21□□□□□ -0.29
LIN54-207ENST00000508171 BICC1Q9H694 974 aaKnown RBP13.21□□□□□ -0.29
LIN54-207ENST00000508171 DTNBO60941 627 aa13.21□□□□□ -0.3
LIN54-207ENST00000508171 SASH1O94885 1247 aa13.21□□□□□ -0.3
LIN54-207ENST00000508171 MYL6BP14649 208 aa13.21□□□□□ -0.3
LIN54-207ENST00000508171 AK2P54819 239 aa13.21□□□□□ -0.3
LIN54-207ENST00000508171 NFATC2IPQ8NCF5 419 aa13.21□□□□□ -0.3
LIN54-207ENST00000508171 LINS1Q8NG48 757 aa13.21□□□□□ -0.3
LIN54-207ENST00000508171 TTC14Q96N46 770 aa13.21□□□□□ -0.3
LIN54-207ENST00000508171 GDPD2Q9HCC8 539 aa13.21□□□□□ -0.3
LIN54-207ENST00000508171 TRPM3Q9HCF6 1732 aaPredicted RBP13.21□□□□□ -0.3
LIN54-207ENST00000508171 DDX21Q9NR30 783 aaKnown RBP eCLIP13.21□□□□□ -0.3
LIN54-207ENST00000508171 ECHDC1Q9NTX5 307 aa13.21□□□□□ -0.3
LIN54-207ENST00000508171 SYCE3A1L190 88 aa13.2□□□□□ -0.3
LIN54-207ENST00000508171 IFIT2P09913 472 aaKnown RBP13.2□□□□□ -0.3
LIN54-207ENST00000508171 ZNF790Q6PG37 636 aa13.2□□□□□ -0.3
LIN54-207ENST00000508171 AACSQ86V21 672 aa13.2□□□□□ -0.3
LIN54-207ENST00000508171 NLRP2Q9NX02 1062 aa13.2□□□□□ -0.3
LIN54-207ENST00000508171 IGKV5-2P06315 115 aa13.2□□□□□ -0.3
LIN54-207ENST00000508171 KLHDC4Q8TBB5 520 aa13.2□□□□□ -0.3
LIN54-207ENST00000508171 PPP1R9BQ96SB3 815 aa13.2□□□□□ -0.3
LIN54-207ENST00000508171 DIAPH3Q9NSV4 1193 aa13.2□□□□□ -0.3
LIN54-207ENST00000508171 OVOS2A0A0G2JMS6 1433 aa13.19□□□□□ -0.3
LIN54-207ENST00000508171 CCDC173Q0VFZ6 552 aa13.19□□□□□ -0.3
LIN54-207ENST00000508171 RUFY3Q7L099 469 aa13.19□□□□□ -0.3
LIN54-207ENST00000508171 EAF2Q96CJ1 260 aaPredicted RBP13.19□□□□□ -0.3
LIN54-207ENST00000508171 CCDC8Q9H0W5 538 aaPredicted RBP13.19□□□□□ -0.3
LIN54-207ENST00000508171 SIL1Q9H173 461 aa13.19□□□□□ -0.3
LIN54-207ENST00000508171 CRYBG1Q9Y4K1 1723 aa13.19□□□□□ -0.3
LIN54-207ENST00000508171 PIP4K2AP48426 406 aaPredicted RBP13.19□□□□□ -0.3
LIN54-207ENST00000508171 ADCK5Q3MIX3 580 aa13.19□□□□□ -0.3
LIN54-207ENST00000508171 RIC3Q7Z5B4 369 aa13.19□□□□□ -0.3
LIN54-207ENST00000508171 RAPGEF4Q8WZA2 1011 aa13.19□□□□□ -0.3
LIN54-207ENST00000508171 CASTP20810 708 aaKnown RBP13.18□□□□□ -0.3
LIN54-207ENST00000508171 DDX54Q8TDD1 881 aaKnown RBP13.18□□□□□ -0.3
LIN54-207ENST00000508171 C1orf167Q5SNV9 1468 aa13.18□□□□□ -0.3
LIN54-207ENST00000508171 GADD45BO75293 160 aaPredicted RBP13.18□□□□□ -0.3
LIN54-207ENST00000508171 DDX58O95786 925 aaKnown RBP13.18□□□□□ -0.3
LIN54-207ENST00000508171 CABLES1Q8TDN4 633 aa13.18□□□□□ -0.3
LIN54-207ENST00000508171 ANP32BQ92688 251 aaKnown RBP13.18□□□□□ -0.3
LIN54-207ENST00000508171 JARID2Q92833 1246 aaPredicted RBP13.18□□□□□ -0.3
LIN54-207ENST00000508171 C19orf44Q9H6X5 657 aa13.18□□□□□ -0.3
LIN54-207ENST00000508171 SLC52A2Q9HAB3 445 aa13.18□□□□□ -0.3
LIN54-207ENST00000508171 TLR7Q9NYK1 1049 aaKnown RBP13.18□□□□□ -0.3
LIN54-207ENST00000508171 CAMTA1Q9Y6Y1 1673 aa13.18□□□□□ -0.3
LIN54-207ENST00000508171 UTYO14607 1347 aa13.18□□□□□ -0.3
LIN54-207ENST00000508171 PRPF40BQ6NWY9 871 aaKnown RBP13.17□□□□□ -0.3
LIN54-207ENST00000508171 COPS6Q7L5N1 327 aa13.17□□□□□ -0.3
LIN54-207ENST00000508171 ERC1Q8IUD2 1116 aa13.17□□□□□ -0.3
LIN54-207ENST00000508171 ADAMTSL3P82987 1691 aa13.17□□□□□ -0.3
LIN54-207ENST00000508171 NPHP3Q7Z494 1330 aa13.17□□□□□ -0.3
LIN54-207ENST00000508171 LARGE1O95461 756 aa13.17□□□□□ -0.3
LIN54-207ENST00000508171 G3BP1Q13283 466 aaKnown RBP eCLIP13.17□□□□□ -0.3
LIN54-207ENST00000508171 EPHA10Q5JZY3 1008 aa13.17□□□□□ -0.3
LIN54-207ENST00000508171 XAGE3Q8WTP9 111 aa13.17□□□□□ -0.3
LIN54-207ENST00000508171 ZNF496Q96IT1 587 aaPredicted RBP13.17□□□□□ -0.3
LIN54-207ENST00000508171 FAM227BQ96M60 508 aa13.17□□□□□ -0.3
LIN54-207ENST00000508171 LIMCH1Q9UPQ0 1083 aa13.17□□□□□ -0.3
LIN54-207ENST00000508171 KDM6AO15550 1401 aaPredicted RBP13.17□□□□□ -0.3
LIN54-207ENST00000508171 RPAP1Q9BWH6 1393 aaPredicted RBP13.17□□□□□ -0.3
LIN54-207ENST00000508171 PHKG2P15735 406 aa13.16□□□□□ -0.3
LIN54-207ENST00000508171 LRSAM1Q6UWE0 723 aa13.16□□□□□ -0.3
LIN54-207ENST00000508171 USP48Q86UV5 1035 aa13.16□□□□□ -0.3
LIN54-207ENST00000508171 RUFY2Q8WXA3 655 aa13.16□□□□□ -0.3
LIN54-207ENST00000508171 EVI5LQ96CN4 794 aa13.16□□□□□ -0.3
LIN54-207ENST00000508171 USP16Q9Y5T5 823 aa13.16□□□□□ -0.3
LIN54-207ENST00000508171 C5P01031 1676 aa13.16□□□□□ -0.3
LIN54-207ENST00000508171 GPATCH3Q96I76 525 aa13.16□□□□□ -0.3
LIN54-207ENST00000508171 JAKMIP1Q96N16 626 aaKnown RBP13.16□□□□□ -0.3
LIN54-207ENST00000508171 HDAC5Q9UQL6 1122 aa13.16□□□□□ -0.3
LIN54-207ENST00000508171 ADAMTS7Q9UKP4 1686 aa13.16□□□□□ -0.3
LIN54-207ENST00000508171 WDR33Q9C0J8 1336 aaKnown RBP13.16□□□□□ -0.3
LIN54-207ENST00000508171 SCN11AQ9UI33 1791 aa13.16□□□□□ -0.3
LIN54-207ENST00000508171 NEURL1BA8MQ27 555 aa13.16□□□□□ -0.3
LIN54-207ENST00000508171 MBD3O95983 291 aa13.16□□□□□ -0.3
LIN54-207ENST00000508171 COL9A3Q14050 684 aaPredicted RBP13.16□□□□□ -0.3
LIN54-207ENST00000508171 TPRNQ4KMQ1 711 aa13.16□□□□□ -0.3
LIN54-207ENST00000508171 LARP1Q6PKG0 1096 aaKnown RBP13.16□□□□□ -0.3
LIN54-207ENST00000508171 BOLA2Q9H3K6 86 aa13.16□□□□□ -0.3
LIN54-207ENST00000508171 CHRNA2Q15822 529 aa13.15□□□□□ -0.3
LIN54-207ENST00000508171 MYD88Q99836 296 aa13.15□□□□□ -0.3
LIN54-207ENST00000508171 TATP17735 454 aaPredicted RBP13.15□□□□□ -0.31
LIN54-207ENST00000508171 SYT1P21579 422 aa13.15□□□□□ -0.31
LIN54-207ENST00000508171 GCKRQ14397 625 aa13.15□□□□□ -0.31
LIN54-207ENST00000508171 NECTIN1Q15223 517 aa13.15□□□□□ -0.31
LIN54-207ENST00000508171 NEXNQ0ZGT2 675 aa13.14□□□□□ -0.31
LIN54-207ENST00000508171 NMIQ13287 307 aaPredicted RBP13.14□□□□□ -0.31
LIN54-207ENST00000508171 NAP1L5Q96NT1 182 aaPredicted RBP13.14□□□□□ -0.31
LIN54-207ENST00000508171 MEGF6O75095 1541 aa13.14□□□□□ -0.31
LIN54-207ENST00000508171 ALS2Q96Q42 1657 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms