RNA–Protein interactions for RNA: ENST00000507678.5

SPCS3-203, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 2,655 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-203ENST00000507678 MEGF6O75095 1541 aa26.72■■□□□ 1.87
SPCS3-203ENST00000507678 USP16Q9Y5T5 823 aa26.72■■□□□ 1.87
SPCS3-203ENST00000507678 CYP2E1P05181 493 aaPredicted RBP26.72■■□□□ 1.87
SPCS3-203ENST00000507678 MRE11P49959 708 aa26.72■■□□□ 1.87
SPCS3-203ENST00000507678 FOXD4L6Q3SYB3 417 aaPredicted RBP26.72■■□□□ 1.87
SPCS3-203ENST00000507678 FOXD4L3Q6VB84 417 aaPredicted RBP26.72■■□□□ 1.87
SPCS3-203ENST00000507678 KAZALD1Q96I82 304 aa26.72■■□□□ 1.87
SPCS3-203ENST00000507678 MYD88Q99836 296 aa26.72■■□□□ 1.87
SPCS3-203ENST00000507678 IGKV5-2P06315 115 aa26.71■■□□□ 1.87
SPCS3-203ENST00000507678 IFNL2Q8IZJ0 200 aa26.71■■□□□ 1.87
SPCS3-203ENST00000507678 TTC5Q8N0Z6 440 aa26.71■■□□□ 1.87
SPCS3-203ENST00000507678 CCDC8Q9H0W5 538 aaPredicted RBP26.71■■□□□ 1.87
SPCS3-203ENST00000507678 SGSM2O43147 1006 aa26.7■■□□□ 1.86
SPCS3-203ENST00000507678 PRPF40AO75400 957 aaKnown RBP26.7■■□□□ 1.86
SPCS3-203ENST00000507678 PTMSP20962 102 aa26.7■■□□□ 1.86
SPCS3-203ENST00000507678 DIAPH3Q9NSV4 1193 aa26.7■■□□□ 1.86
SPCS3-203ENST00000507678 OVOS2A0A0G2JMS6 1433 aa26.69■■□□□ 1.86
SPCS3-203ENST00000507678 CYP27B1O15528 508 aa26.69■■□□□ 1.86
SPCS3-203ENST00000507678 GLRX3O76003 335 aaKnown RBP26.69■■□□□ 1.86
SPCS3-203ENST00000507678 ANAPC15P60006 121 aa26.69■■□□□ 1.86
SPCS3-203ENST00000507678 MTX1Q13505 466 aa26.69■■□□□ 1.86
SPCS3-203ENST00000507678 KIAA1211Q6ZU35 1233 aa26.69■■□□□ 1.86
SPCS3-203ENST00000507678 NEXNQ0ZGT2 675 aa26.69■■□□□ 1.86
SPCS3-203ENST00000507678 RRAGDQ9NQL2 400 aaPredicted RBP26.68■■□□□ 1.86
SPCS3-203ENST00000507678 KIF1AQ12756 1690 aa26.68■■□□□ 1.86
SPCS3-203ENST00000507678 HSPA4P34932 840 aa26.68■■□□□ 1.86
SPCS3-203ENST00000507678 G3BP1Q13283 466 aaKnown RBP eCLIP26.68■■□□□ 1.86
SPCS3-203ENST00000507678 CAVIN1Q6NZI2 390 aaKnown RBP26.68■■□□□ 1.86
SPCS3-203ENST00000507678 ECHDC1Q9NTX5 307 aa26.68■■□□□ 1.86
SPCS3-203ENST00000507678 CLEC17AQ6ZS10 378 aa26.67■■□□□ 1.86
SPCS3-203ENST00000507678 CPA1P15085 419 aa26.66■■□□□ 1.86
SPCS3-203ENST00000507678 LARP1Q6PKG0 1096 aaKnown RBP26.66■■□□□ 1.86
SPCS3-203ENST00000507678 CADPS2Q86UW7 1296 aa26.66■■□□□ 1.86
SPCS3-203ENST00000507678 MCM2P49736 904 aa26.66■■□□□ 1.86
SPCS3-203ENST00000507678 RASEFQ8IZ41 740 aa26.66■■□□□ 1.86
SPCS3-203ENST00000507678 VSIG10Q8N0Z9 540 aa26.66■■□□□ 1.86
SPCS3-203ENST00000507678 TLR7Q9NYK1 1049 aaKnown RBP26.66■■□□□ 1.86
SPCS3-203ENST00000507678 DTNBO60941 627 aa26.65■■□□□ 1.86
SPCS3-203ENST00000507678 SASH1O94885 1247 aa26.65■■□□□ 1.86
SPCS3-203ENST00000507678 KLHL40Q2TBA0 621 aa26.65■■□□□ 1.86
SPCS3-203ENST00000507678 LMBRD1Q9NUN5 540 aa26.65■■□□□ 1.86
SPCS3-203ENST00000507678 RAD50Q92878 1312 aa26.65■■□□□ 1.86
SPCS3-203ENST00000507678 ATP5J2-PTCD1G3V325 749 aa26.65■■□□□ 1.86
SPCS3-203ENST00000507678 PTCD1O75127 700 aaKnown RBP26.65■■□□□ 1.86
SPCS3-203ENST00000507678 GLIPR1L2Q4G1C9 344 aa26.65■■□□□ 1.86
SPCS3-203ENST00000507678 GPATCH3Q96I76 525 aa26.65■■□□□ 1.86
SPCS3-203ENST00000507678 LSG1Q9H089 658 aaKnown RBP26.65■■□□□ 1.86
SPCS3-203ENST00000507678 TTC41PQ6P2S7 1318 aa26.65■■□□□ 1.86
SPCS3-203ENST00000507678 ALS2Q96Q42 1657 aa26.64■■□□□ 1.86
SPCS3-203ENST00000507678 NEURL1BA8MQ27 555 aa26.64■■□□□ 1.86
SPCS3-203ENST00000507678 CABP4P57796 275 aa26.64■■□□□ 1.86
SPCS3-203ENST00000507678 DDX54Q8TDD1 881 aaKnown RBP26.64■■□□□ 1.86
SPCS3-203ENST00000507678 EAF2Q96CJ1 260 aaPredicted RBP26.64■■□□□ 1.86
SPCS3-203ENST00000507678 SNX14Q9Y5W7 946 aa26.64■■□□□ 1.86
SPCS3-203ENST00000507678 EPHA10Q5JZY3 1008 aa26.64■■□□□ 1.86
SPCS3-203ENST00000507678 ERC1Q8IUD2 1116 aa26.64■■□□□ 1.86
SPCS3-203ENST00000507678 HDAC5Q9UQL6 1122 aa26.64■■□□□ 1.86
SPCS3-203ENST00000507678 ANKRD13DQ6ZTN6 518 aa26.63■■□□□ 1.85
SPCS3-203ENST00000507678 ZMYND15Q9H091 742 aa26.63■■□□□ 1.85
SPCS3-203ENST00000507678 CAMTA1Q9Y6Y1 1673 aa26.63■■□□□ 1.85
SPCS3-203ENST00000507678 DCAF5Q96JK2 942 aa26.62■■□□□ 1.85
SPCS3-203ENST00000507678 SNRPA1P09661 255 aaKnown RBP26.62■■□□□ 1.85
SPCS3-203ENST00000507678 GCKRQ14397 625 aa26.62■■□□□ 1.85
SPCS3-203ENST00000507678 BOLA2Q9H3K6 86 aa26.62■■□□□ 1.85
SPCS3-203ENST00000507678 PTH1RQ03431 593 aa26.62■■□□□ 1.85
SPCS3-203ENST00000507678 RBM27Q9P2N5 1060 aaKnown RBP26.62■■□□□ 1.85
SPCS3-203ENST00000507678 SIPA1L3O60292 1781 aaPredicted RBP26.61■■□□□ 1.85
SPCS3-203ENST00000507678 CUL4AQ13619 759 aa26.6■■□□□ 1.85
SPCS3-203ENST00000507678 FMNL2Q96PY5 1086 aa26.6■■□□□ 1.85
SPCS3-203ENST00000507678 TNS3Q68CZ2 1445 aa26.6■■□□□ 1.85
SPCS3-203ENST00000507678 TPRNQ4KMQ1 711 aa26.6■■□□□ 1.85
SPCS3-203ENST00000507678 UBE3BQ7Z3V4 1068 aa26.6■■□□□ 1.85
SPCS3-203ENST00000507678 METTL22Q9BUU2 404 aaPredicted RBP26.6■■□□□ 1.85
SPCS3-203ENST00000507678 PRPF40BQ6NWY9 871 aaKnown RBP26.59■■□□□ 1.85
SPCS3-203ENST00000507678 C5P01031 1676 aa26.59■■□□□ 1.85
SPCS3-203ENST00000507678 STRCP1A6NGW2 1772 aa26.59■■□□□ 1.85
SPCS3-203ENST00000507678 SPATA31A3Q5VYP0 1347 aa26.59■■□□□ 1.85
SPCS3-203ENST00000507678 USP42Q9H9J4 1324 aaKnown RBP26.59■■□□□ 1.85
SPCS3-203ENST00000507678 CASTP20810 708 aaKnown RBP26.59■■□□□ 1.85
SPCS3-203ENST00000507678 FAM227BQ96M60 508 aa26.59■■□□□ 1.85
SPCS3-203ENST00000507678 PRDM11Q9NQV5 511 aa26.59■■□□□ 1.85
SPCS3-203ENST00000507678 CCDC9Q9Y3X0 531 aaKnown RBP26.59■■□□□ 1.85
SPCS3-203ENST00000507678 TOM1L2Q6ZVM7 507 aa26.58■■□□□ 1.85
SPCS3-203ENST00000507678 AK2P54819 239 aa26.57■■□□□ 1.84
SPCS3-203ENST00000507678 GPT2Q8TD30 523 aa26.57■■□□□ 1.84
SPCS3-203ENST00000507678 RUFY2Q8WXA3 655 aa26.57■■□□□ 1.84
SPCS3-203ENST00000507678 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.57■■□□□ 1.845e-6■■□□□ 13.2
SPCS3-203ENST00000507678 UTYO14607 1347 aa26.57■■□□□ 1.84
SPCS3-203ENST00000507678 KCNJ4P48050 445 aa26.57■■□□□ 1.84
SPCS3-203ENST00000507678 EVI5LQ96CN4 794 aa26.56■■□□□ 1.84
SPCS3-203ENST00000507678 EDC3Q96F86 508 aaKnown RBP26.56■■□□□ 1.84
SPCS3-203ENST00000507678 GDPD2Q9HCC8 539 aa26.56■■□□□ 1.84
SPCS3-203ENST00000507678 NSFL1CQ9UNZ2 370 aaKnown RBP26.56■■□□□ 1.84
SPCS3-203ENST00000507678 CHMP3Q9Y3E7 222 aa26.55■■□□□ 1.84
SPCS3-203ENST00000507678 NDUFB9Q9Y6M9 179 aa26.55■■□□□ 1.84
SPCS3-203ENST00000507678 BRD1O95696 1058 aa26.55■■□□□ 1.84
SPCS3-203ENST00000507678 ADCK5Q3MIX3 580 aa26.55■■□□□ 1.84
SPCS3-203ENST00000507678 ZSCAN23Q3MJ62 389 aa26.55■■□□□ 1.84
SPCS3-203ENST00000507678 JAKMIP1Q96N16 626 aaKnown RBP26.55■■□□□ 1.84
SPCS3-203ENST00000507678 SCN11AQ9UI33 1791 aa26.55■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 453 ms