RNA–Protein interactions for RNA: ENST00000506706.5

RNF4-207, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 2,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-207ENST00000506706 PLBD2Q8NHP8 589 aa27.26■■□□□ 1.95
RNF4-207ENST00000506706 BICC1Q9H694 974 aaKnown RBP27.26■■□□□ 1.95
RNF4-207ENST00000506706 DISP2A7MBM2 1401 aa27.25■■□□□ 1.95
RNF4-207ENST00000506706 PTCD1O75127 700 aaKnown RBP27.25■■□□□ 1.95
RNF4-207ENST00000506706 ERC1Q8IUD2 1116 aa27.25■■□□□ 1.95
RNF4-207ENST00000506706 USP26Q9BXU7 913 aa27.25■■□□□ 1.95
RNF4-207ENST00000506706 NBPF26B4DH59 902 aa27.24■■□□□ 1.95
RNF4-207ENST00000506706 REC8O95072 547 aa27.24■■□□□ 1.95
RNF4-207ENST00000506706 NBPF14Q5TI25 921 aa27.24■■□□□ 1.95
RNF4-207ENST00000506706 NBPF10Q6P3W6 841 aaKnown RBP27.24■■□□□ 1.95
RNF4-207ENST00000506706 NBPF15Q8N660 670 aa27.24■■□□□ 1.95
RNF4-207ENST00000506706 SLKQ9H2G2 1235 aaPredicted RBP27.24■■□□□ 1.95
RNF4-207ENST00000506706 AFDNP55196 1824 aaKnown RBP27.23■■□□□ 1.95
RNF4-207ENST00000506706 TRIM6-TRIM34B2RNG4 842 aa27.23■■□□□ 1.95
RNF4-207ENST00000506706 ERC2O15083 957 aa27.23■■□□□ 1.95
RNF4-207ENST00000506706 PLCH1Q4KWH8 1693 aa27.22■■□□□ 1.95
RNF4-207ENST00000506706 NFKBIBQ15653 356 aa27.21■■□□□ 1.95
RNF4-207ENST00000506706 RILPL2Q969X0 211 aa27.21■■□□□ 1.95
RNF4-207ENST00000506706 ANTXR1Q9H6X2 564 aa27.21■■□□□ 1.95
RNF4-207ENST00000506706 PHLPP1O60346 1717 aa27.2■■□□□ 1.95
RNF4-207ENST00000506706 PA2G4Q9UQ80 394 aaKnown RBP27.2■■□□□ 1.95
RNF4-207ENST00000506706 CLASRPQ8N2M8 674 aaKnown RBP27.2■■□□□ 1.94
RNF4-207ENST00000506706 A1BGP04217 495 aa27.19■■□□□ 1.94
RNF4-207ENST00000506706 PI4K2BQ8TCG2 481 aa27.18■■□□□ 1.94
RNF4-207ENST00000506706 USP42Q9H9J4 1324 aaKnown RBP27.17■■□□□ 1.94
RNF4-207ENST00000506706 COL15A1P39059 1388 aa27.17■■□□□ 1.94
RNF4-207ENST00000506706 G3BP1Q13283 466 aaKnown RBP eCLIP27.17■■□□□ 1.94
RNF4-207ENST00000506706 PIGBQ92521 554 aa27.17■■□□□ 1.94
RNF4-207ENST00000506706 TTC41PQ6P2S7 1318 aa27.17■■□□□ 1.94
RNF4-207ENST00000506706 ATP5J2-PTCD1G3V325 749 aa27.17■■□□□ 1.94
RNF4-207ENST00000506706 CHMLP26374 656 aa27.17■■□□□ 1.94
RNF4-207ENST00000506706 ITGB4P16144 1822 aa27.16■■□□□ 1.94
RNF4-207ENST00000506706 EXOC5O00471 708 aa27.16■■□□□ 1.94
RNF4-207ENST00000506706 ESYT1Q9BSJ8 1104 aa27.16■■□□□ 1.94
RNF4-207ENST00000506706 TEX13AQ9BXU3 409 aaPredicted RBP27.16■■□□□ 1.94
RNF4-207ENST00000506706 NUP188Q5SRE5 1749 aa27.15■■□□□ 1.94
RNF4-207ENST00000506706 TTLL7Q6ZT98 887 aa27.15■■□□□ 1.94
RNF4-207ENST00000506706 UNC5CLQ8IV45 518 aa27.15■■□□□ 1.94
RNF4-207ENST00000506706 VSIG10Q8N0Z9 540 aa27.15■■□□□ 1.94
RNF4-207ENST00000506706 SPRYD3Q8NCJ5 442 aa27.15■■□□□ 1.94
RNF4-207ENST00000506706 WNK3Q9BYP7 1800 aa27.15■■□□□ 1.94
RNF4-207ENST00000506706 A0A087WZG4 1122 aa27.15■■□□□ 1.94
RNF4-207ENST00000506706 RABEP1Q15276 862 aa27.15■■□□□ 1.94
RNF4-207ENST00000506706 EPHA10Q5JZY3 1008 aa27.15■■□□□ 1.94
RNF4-207ENST00000506706 ASAP1Q9ULH1 1129 aa27.15■■□□□ 1.94
RNF4-207ENST00000506706 UBE3BQ7Z3V4 1068 aa27.14■■□□□ 1.94
RNF4-207ENST00000506706 LRP6O75581 1613 aa27.14■■□□□ 1.93
RNF4-207ENST00000506706 AK9Q5TCS8 1911 aa27.13■■□□□ 1.93
RNF4-207ENST00000506706 IFIT2P09913 472 aaKnown RBP27.13■■□□□ 1.93
RNF4-207ENST00000506706 GPATCH3Q96I76 525 aa27.13■■□□□ 1.93
RNF4-207ENST00000506706 RBM42Q9BTD8 480 aaKnown RBP27.13■■□□□ 1.93
RNF4-207ENST00000506706 ATG3Q9NT62 314 aa27.13■■□□□ 1.93
RNF4-207ENST00000506706 GLRX3O76003 335 aaKnown RBP27.12■■□□□ 1.93
RNF4-207ENST00000506706 ADAMTS2O95450 1211 aa27.12■■□□□ 1.93
RNF4-207ENST00000506706 SASH1O94885 1247 aa27.12■■□□□ 1.93
RNF4-207ENST00000506706 RABL6Q3YEC7 729 aaPredicted RBP27.12■■□□□ 1.93
RNF4-207ENST00000506706 JARID2Q92833 1246 aaPredicted RBP27.12■■□□□ 1.93
RNF4-207ENST00000506706 CNTROBQ8N137 903 aa27.11■■□□□ 1.93
RNF4-207ENST00000506706 CDCA7Q9BWT1 371 aaPredicted RBP27.11■■□□□ 1.93
RNF4-207ENST00000506706 CASP7P55210 303 aa27.1■■□□□ 1.93
RNF4-207ENST00000506706 ECHDC1Q9NTX5 307 aa27.1■■□□□ 1.93
RNF4-207ENST00000506706 CWC25Q9NXE8 425 aaPredicted RBP27.1■■□□□ 1.93
RNF4-207ENST00000506706 TOM1O60784 492 aa27.1■■□□□ 1.93
RNF4-207ENST00000506706 BCL9O00512 1426 aa27.09■■□□□ 1.93
RNF4-207ENST00000506706 AACSQ86V21 672 aa27.09■■□□□ 1.93
RNF4-207ENST00000506706 ZBTB3Q9H5J0 574 aa27.09■■□□□ 1.93
RNF4-207ENST00000506706 COPRSQ9NQ92 184 aa27.09■■□□□ 1.93
RNF4-207ENST00000506706 NRAPQ86VF7 1730 aa27.09■■□□□ 1.93
RNF4-207ENST00000506706 H7C1W4 665 aa27.09■■□□□ 1.93
RNF4-207ENST00000506706 K7ELQ4 463 aaPredicted RBP27.09■■□□□ 1.93
RNF4-207ENST00000506706 CD2BP2O95400 341 aaKnown RBP27.09■■□□□ 1.93
RNF4-207ENST00000506706 MAP4K4O95819 1239 aaPredicted RBP27.09■■□□□ 1.93
RNF4-207ENST00000506706 DNAJC10Q8IXB1 793 aa27.09■■□□□ 1.93
RNF4-207ENST00000506706 SIL1Q9H173 461 aa27.09■■□□□ 1.93
RNF4-207ENST00000506706 THRAP3Q9Y2W1 955 aaKnown RBP27.09■■□□□ 1.93
RNF4-207ENST00000506706 STARD3NLO95772 234 aa27.08■■□□□ 1.93
RNF4-207ENST00000506706 CCDC191Q8NCU4 936 aa27.07■■□□□ 1.92
RNF4-207ENST00000506706 KLHDC4Q8TBB5 520 aa27.07■■□□□ 1.92
RNF4-207ENST00000506706 CHMP5Q9NZZ3 219 aa27.07■■□□□ 1.92
RNF4-207ENST00000506706 SPATA31A1Q5TZJ5 1347 aa27.07■■□□□ 1.92
RNF4-207ENST00000506706 FRAT2O75474 233 aaPredicted RBP27.07■■□□□ 1.92
RNF4-207ENST00000506706 RFX5P48382 616 aaPredicted RBP27.06■■□□□ 1.92
RNF4-207ENST00000506706 PIP4K2BP78356 416 aa27.06■■□□□ 1.92
RNF4-207ENST00000506706 EAF2Q96CJ1 260 aaPredicted RBP27.05■■□□□ 1.92
RNF4-207ENST00000506706 MCCP23508 829 aa27.05■■□□□ 1.92
RNF4-207ENST00000506706 ANO2Q9NQ90 1003 aa27.05■■□□□ 1.92
RNF4-207ENST00000506706 PTPN12Q05209 780 aaKnown RBP27.04■■□□□ 1.92
RNF4-207ENST00000506706 TJP1Q07157 1748 aa27.04■■□□□ 1.92
RNF4-207ENST00000506706 NUTM2BA6NNL0 878 aaPredicted RBP27.04■■□□□ 1.92
RNF4-207ENST00000506706 NUTM2EB1AL46 878 aaPredicted RBP27.04■■□□□ 1.92
RNF4-207ENST00000506706 EPB41L2O43491 1005 aaKnown RBP27.04■■□□□ 1.92
RNF4-207ENST00000506706 NUTM2AQ8IVF1 878 aaPredicted RBP27.04■■□□□ 1.92
RNF4-207ENST00000506706 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.04■■□□□ 1.92
RNF4-207ENST00000506706 FOXO4P98177 505 aa27.02■■□□□ 1.92
RNF4-207ENST00000506706 KIF6Q6ZMV9 814 aa27.02■■□□□ 1.92
RNF4-207ENST00000506706 SYTL4Q96C24 671 aaPredicted RBP27.02■■□□□ 1.92
RNF4-207ENST00000506706 ZNF330Q9Y3S2 320 aaPredicted RBP27.02■■□□□ 1.92
RNF4-207ENST00000506706 DDB1Q16531 1140 aa27.02■■□□□ 1.92
RNF4-207ENST00000506706 LMBR1LQ6UX01 489 aa27.02■■□□□ 1.92
RNF4-207ENST00000506706 CCDC8Q9H0W5 538 aaPredicted RBP27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms