RNA–Protein interactions for RNA: ENST00000504701.5

CDC42SE2-207, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-207ENST00000504701 PNNQ9H307 717 aaKnown RBP29.91■■■□□ 2.38
CDC42SE2-207ENST00000504701 SLX4Q8IY92 1834 aa29.89■■■□□ 2.38
CDC42SE2-207ENST00000504701 FAM177BA6PVY3 158 aa29.89■■■□□ 2.38
CDC42SE2-207ENST00000504701 TMPOP42166 694 aaKnown RBP29.89■■■□□ 2.38
CDC42SE2-207ENST00000504701 NFKBIEO00221 500 aa29.88■■■□□ 2.37
CDC42SE2-207ENST00000504701 NPHP1O15259 732 aa29.88■■■□□ 2.37
CDC42SE2-207ENST00000504701 PDE6BP35913 854 aa29.88■■■□□ 2.37
CDC42SE2-207ENST00000504701 CLEC4GQ6UXB4 293 aa29.88■■■□□ 2.37
CDC42SE2-207ENST00000504701 TIAM2Q8IVF5 1701 aa29.88■■■□□ 2.37
CDC42SE2-207ENST00000504701 CEP350Q5VT06 3117 aa29.87■■■□□ 2.37
CDC42SE2-207ENST00000504701 NUP98P52948 1817 aa29.87■■■□□ 2.37
CDC42SE2-207ENST00000504701 TTLL7Q6ZT98 887 aa29.87■■■□□ 2.37
CDC42SE2-207ENST00000504701 NIP7Q9Y221 180 aaKnown RBP eCLIP29.87■■■□□ 2.37
CDC42SE2-207ENST00000504701 C21orf2O43822 256 aa29.86■■■□□ 2.37
CDC42SE2-207ENST00000504701 MYL6BP14649 208 aa29.86■■■□□ 2.37
CDC42SE2-207ENST00000504701 ST5P78524 1137 aa29.86■■■□□ 2.37
CDC42SE2-207ENST00000504701 NEUROD2Q15784 382 aa29.86■■■□□ 2.37
CDC42SE2-207ENST00000504701 NBPF5PQ86XG9 351 aaPredicted RBP29.86■■■□□ 2.37
CDC42SE2-207ENST00000504701 TSPYL4Q9UJ04 414 aa29.86■■■□□ 2.37
CDC42SE2-207ENST00000504701 FER1L6Q2WGJ9 1857 aa29.85■■■□□ 2.37
CDC42SE2-207ENST00000504701 ZNF652Q9Y2D9 606 aa29.85■■■□□ 2.37
CDC42SE2-207ENST00000504701 TNRC6CQ9HCJ0 1690 aaKnown RBP29.85■■■□□ 2.37
CDC42SE2-207ENST00000504701 ARFGEF2Q9Y6D5 1785 aa29.85■■■□□ 2.37
CDC42SE2-207ENST00000504701 SRGNP10124 158 aa29.83■■■□□ 2.37
CDC42SE2-207ENST00000504701 PRKRIP1Q9H875 184 aaPredicted RBP29.82■■■□□ 2.36
CDC42SE2-207ENST00000504701 ADAMTS8Q9UP79 889 aa29.81■■■□□ 2.36
CDC42SE2-207ENST00000504701 LMNB1P20700 586 aa29.8■■■□□ 2.36
CDC42SE2-207ENST00000504701 MAP3K15Q6ZN16 1313 aa29.79■■■□□ 2.36
CDC42SE2-207ENST00000504701 ANXA1P04083 346 aa29.79■■■□□ 2.36
CDC42SE2-207ENST00000504701 HSPA6P17066 643 aa29.79■■■□□ 2.36
CDC42SE2-207ENST00000504701 KRT24Q2M2I5 525 aa29.79■■■□□ 2.36
CDC42SE2-207ENST00000504701 PRPF40BQ6NWY9 871 aaKnown RBP29.79■■■□□ 2.36
CDC42SE2-207ENST00000504701 ZBTB3Q9H5J0 574 aa29.79■■■□□ 2.36
CDC42SE2-207ENST00000504701 TRIM35Q9UPQ4 493 aa29.79■■■□□ 2.36
CDC42SE2-207ENST00000504701 PDZRN3Q9UPQ7 1066 aa29.79■■■□□ 2.36
CDC42SE2-207ENST00000504701 ABCC12Q96J65 1359 aa29.78■■■□□ 2.36
CDC42SE2-207ENST00000504701 EIF2S2P20042 333 aaKnown RBP29.78■■■□□ 2.36
CDC42SE2-207ENST00000504701 WDR43Q15061 677 aaKnown RBP eCLIP29.78■■■□□ 2.36
CDC42SE2-207ENST00000504701 PROSER3Q2NL68 480 aa29.78■■■□□ 2.36
CDC42SE2-207ENST00000504701 STYK1Q6J9G0 422 aa29.78■■■□□ 2.36
CDC42SE2-207ENST00000504701 RRAGCQ9HB90 399 aa29.78■■■□□ 2.36
CDC42SE2-207ENST00000504701 LRP10Q7Z4F1 713 aa29.77■■■□□ 2.36
CDC42SE2-207ENST00000504701 NECTIN2Q92692 538 aa29.77■■■□□ 2.36
CDC42SE2-207ENST00000504701 RUNDC1Q96C34 613 aa29.77■■■□□ 2.36
CDC42SE2-207ENST00000504701 MASTLQ96GX5 879 aa29.77■■■□□ 2.36
CDC42SE2-207ENST00000504701 UBN2Q6ZU65 1347 aa29.76■■■□□ 2.36
CDC42SE2-207ENST00000504701 GPTP24298 496 aa29.76■■■□□ 2.35
CDC42SE2-207ENST00000504701 PDIA6Q15084 440 aa29.76■■■□□ 2.35
CDC42SE2-207ENST00000504701 NUTM1Q86Y26 1132 aa29.76■■■□□ 2.35
CDC42SE2-207ENST00000504701 DICER1Q9UPY3 1922 aaKnown RBP29.76■■■□□ 2.35
CDC42SE2-207ENST00000504701 RGL2O15211 777 aa29.75■■■□□ 2.35
CDC42SE2-207ENST00000504701 TOMM70O94826 608 aa29.75■■■□□ 2.35
CDC42SE2-207ENST00000504701 OLFM4Q6UX06 510 aa29.75■■■□□ 2.35
CDC42SE2-207ENST00000504701 TPTE2Q6XPS3 522 aa29.75■■■□□ 2.35
CDC42SE2-207ENST00000504701 KIF6Q6ZMV9 814 aa29.75■■■□□ 2.35
CDC42SE2-207ENST00000504701 CNKSR1Q969H4 720 aa29.75■■■□□ 2.35
CDC42SE2-207ENST00000504701 KDM2BQ8NHM5 1336 aa29.74■■■□□ 2.35
CDC42SE2-207ENST00000504701 ERVV-1B6SEH8 477 aa29.74■■■□□ 2.35
CDC42SE2-207ENST00000504701 LMOD3Q0VAK6 560 aa29.74■■■□□ 2.35
CDC42SE2-207ENST00000504701 LAS1LQ9Y4W2 734 aaKnown RBP29.73■■■□□ 2.35
CDC42SE2-207ENST00000504701 KLRG2A4D1S0 409 aaPredicted RBP29.72■■■□□ 2.35
CDC42SE2-207ENST00000504701 ERFEQ4G0M1 354 aa29.72■■■□□ 2.35
CDC42SE2-207ENST00000504701 C7orf43Q8WVR3 580 aa29.71■■■□□ 2.35
CDC42SE2-207ENST00000504701 NPR1P16066 1061 aa29.7■■■□□ 2.35
CDC42SE2-207ENST00000504701 SUSD4Q5VX71 490 aa29.7■■■□□ 2.35
CDC42SE2-207ENST00000504701 ERBB4Q15303 1308 aa29.7■■■□□ 2.34
CDC42SE2-207ENST00000504701 CHL1O00533 1208 aa29.69■■■□□ 2.34
CDC42SE2-207ENST00000504701 SLC51AQ86UW1 340 aa29.69■■■□□ 2.34
CDC42SE2-207ENST00000504701 TAOK3Q9H2K8 898 aa29.69■■■□□ 2.34
CDC42SE2-207ENST00000504701 BABAM1Q9NWV8 329 aa29.69■■■□□ 2.34
CDC42SE2-207ENST00000504701 ZC3H4Q9UPT8 1303 aaKnown RBP29.69■■■□□ 2.34
CDC42SE2-207ENST00000504701 GLTPD2A6NH11 291 aa29.68■■■□□ 2.34
CDC42SE2-207ENST00000504701 GTF2E1P29083 439 aaPredicted RBP29.68■■■□□ 2.34
CDC42SE2-207ENST00000504701 ZNF34Q8IZ26 560 aa29.68■■■□□ 2.34
CDC42SE2-207ENST00000504701 CCDC184Q52MB2 194 aa29.67■■■□□ 2.34
CDC42SE2-207ENST00000504701 GIGYF2Q6Y7W6 1299 aaKnown RBP29.67■■■□□ 2.34
CDC42SE2-207ENST00000504701 C16orf71Q8IYS4 520 aaPredicted RBP29.66■■■□□ 2.34
CDC42SE2-207ENST00000504701 RBM46Q8TBY0 533 aaKnown RBP29.66■■■□□ 2.34
CDC42SE2-207ENST00000504701 ANKRD36CQ5JPF3 1778 aa29.66■■■□□ 2.34
CDC42SE2-207ENST00000504701 LTBP3Q9NS15 1303 aa29.66■■■□□ 2.34
CDC42SE2-207ENST00000504701 NTSR2O95665 410 aa29.65■■■□□ 2.34
CDC42SE2-207ENST00000504701 C3orf67Q6ZVT6 689 aa29.65■■■□□ 2.34
CDC42SE2-207ENST00000504701 AIMP1Q12904 312 aaKnown RBP29.64■■■□□ 2.34
CDC42SE2-207ENST00000504701 NYXQ9GZU5 481 aa29.64■■■□□ 2.34
CDC42SE2-207ENST00000504701 WDR90Q96KV7 1748 aa29.63■■■□□ 2.33
CDC42SE2-207ENST00000504701 POTECB2RU33 542 aa29.63■■■□□ 2.33
CDC42SE2-207ENST00000504701 COPS6Q7L5N1 327 aa29.63■■■□□ 2.33
CDC42SE2-207ENST00000504701 XAGE3Q8WTP9 111 aa29.63■■■□□ 2.33
CDC42SE2-207ENST00000504701 APAF1O14727 1248 aa29.62■■■□□ 2.33
CDC42SE2-207ENST00000504701 HTRA3P83110 453 aa29.62■■■□□ 2.33
CDC42SE2-207ENST00000504701 CRY2Q49AN0 593 aa29.62■■■□□ 2.33
CDC42SE2-207ENST00000504701 CCDC93Q567U6 631 aa29.62■■■□□ 2.33
CDC42SE2-207ENST00000504701 ZNF428Q96B54 188 aa29.62■■■□□ 2.33
CDC42SE2-207ENST00000504701 IBTKQ9P2D0 1353 aaPredicted RBP29.62■■■□□ 2.33
CDC42SE2-207ENST00000504701 CHPF2Q9P2E5 772 aa29.61■■■□□ 2.33
CDC42SE2-207ENST00000504701 ZNF277Q9NRM2 450 aaPredicted RBP29.6■■■□□ 2.33
CDC42SE2-207ENST00000504701 SNED1Q8TER0 1413 aa29.6■■■□□ 2.33
CDC42SE2-207ENST00000504701 SOGA3Q5TF21 947 aa29.59■■■□□ 2.33
CDC42SE2-207ENST00000504701 LAMB2P55268 1798 aa29.59■■■□□ 2.33
CDC42SE2-207ENST00000504701 RIC1Q4ADV7 1423 aa29.58■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms