RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 SMTNL1A8MU46 457 aa9.03□□□□□ -0.96
NEDD9-208ENST00000504387 BECN2A8MW95 431 aa9.03□□□□□ -0.96
NEDD9-208ENST00000504387 HSPA4P34932 840 aa9.03□□□□□ -0.96
NEDD9-208ENST00000504387 BRPF1P55201 1214 aaPredicted RBP9.03□□□□□ -0.96
NEDD9-208ENST00000504387 TERF2Q15554 542 aa9.03□□□□□ -0.96
NEDD9-208ENST00000504387 KRT222Q8N1A0 295 aa9.03□□□□□ -0.96
NEDD9-208ENST00000504387 NEK11Q8NG66 645 aa9.03□□□□□ -0.96
NEDD9-208ENST00000504387 ZCCHC17Q9NP64 241 aaKnown RBP9.03□□□□□ -0.96
NEDD9-208ENST00000504387 CTIFO43310 598 aaKnown RBP9.03□□□□□ -0.96
NEDD9-208ENST00000504387 GYS2P54840 703 aa9.03□□□□□ -0.96
NEDD9-208ENST00000504387 KRT85P78386 507 aa9.03□□□□□ -0.96
NEDD9-208ENST00000504387 PPP1R42Q7Z4L9 355 aa9.03□□□□□ -0.96
NEDD9-208ENST00000504387 FEZ1Q99689 392 aa9.03□□□□□ -0.96
NEDD9-208ENST00000504387 PHAXQ9H814 394 aaKnown RBP9.03□□□□□ -0.96
NEDD9-208ENST00000504387 TAF6LQ9Y6J9 622 aa9.03□□□□□ -0.96
NEDD9-208ENST00000504387 NDUFB9Q9Y6M9 179 aa9.03□□□□□ -0.96
NEDD9-208ENST00000504387 YEATS2Q9ULM3 1422 aa9.02□□□□□ -0.96
NEDD9-208ENST00000504387 RIMS2Q9UQ26 1411 aa9.02□□□□□ -0.96
NEDD9-208ENST00000504387 UBTFL1P0CB47 393 aaPredicted RBP9.02□□□□□ -0.97
NEDD9-208ENST00000504387 ZNF75DP51815 510 aa9.02□□□□□ -0.97
NEDD9-208ENST00000504387 NLRP6P59044 892 aa9.02□□□□□ -0.97
NEDD9-208ENST00000504387 LARP1Q6PKG0 1096 aaKnown RBP9.02□□□□□ -0.97
NEDD9-208ENST00000504387 TPCN1Q9ULQ1 816 aa9.02□□□□□ -0.97
NEDD9-208ENST00000504387 PA2G4Q9UQ80 394 aaKnown RBP9.02□□□□□ -0.97
NEDD9-208ENST00000504387 BIN1O00499 593 aa9.01□□□□□ -0.97
NEDD9-208ENST00000504387 JAK2O60674 1132 aa9.01□□□□□ -0.97
NEDD9-208ENST00000504387 RAB11FIP3O75154 756 aa9.01□□□□□ -0.97
NEDD9-208ENST00000504387 FLIIQ13045 1269 aa9.01□□□□□ -0.97
NEDD9-208ENST00000504387 HSP90AA4PQ58FG1 418 aa9.01□□□□□ -0.97
NEDD9-208ENST00000504387 CCAR2Q8N163 923 aaKnown RBP9.01□□□□□ -0.97
NEDD9-208ENST00000504387 TULP4Q9NRJ4 1543 aa9.01□□□□□ -0.97
NEDD9-208ENST00000504387 KIDINS220Q9ULH0 1771 aa9.01□□□□□ -0.97
NEDD9-208ENST00000504387 EFCAB6Q5THR3 1501 aa9.01□□□□□ -0.97
NEDD9-208ENST00000504387 ARHGEF40Q8TER5 1519 aa9.01□□□□□ -0.97
NEDD9-208ENST00000504387 MROH2AA6NES4 1674 aa9.01□□□□□ -0.97
NEDD9-208ENST00000504387 HSP90B1P14625 803 aaKnown RBP9.01□□□□□ -0.97
NEDD9-208ENST00000504387 SYT10Q6XYQ8 523 aa9.01□□□□□ -0.97
NEDD9-208ENST00000504387 C11orf57Q6ZUT1 292 aaPredicted RBP9.01□□□□□ -0.97
NEDD9-208ENST00000504387 HOMER1Q86YM7 354 aa9.01□□□□□ -0.97
NEDD9-208ENST00000504387 FAM227BQ96M60 508 aa9.01□□□□□ -0.97
NEDD9-208ENST00000504387 TIGD1Q96MW7 591 aa9.01□□□□□ -0.97
NEDD9-208ENST00000504387 SIL1Q9H173 461 aa9.01□□□□□ -0.97
NEDD9-208ENST00000504387 HYPKQ9NX55 129 aa9.01□□□□□ -0.97
NEDD9-208ENST00000504387 CYP46A1Q9Y6A2 500 aa9.01□□□□□ -0.97
NEDD9-208ENST00000504387 RGS12O14924 1447 aa9.01□□□□□ -0.97
NEDD9-208ENST00000504387 KNDC1Q76NI1 1749 aa9.01□□□□□ -0.97
NEDD9-208ENST00000504387 PIK3R4Q99570 1358 aa9.01□□□□□ -0.97
NEDD9-208ENST00000504387 PPRC1Q5VV67 1664 aaKnown RBP9.01□□□□□ -0.97
NEDD9-208ENST00000504387 QRICH2Q9H0J4 1663 aa9.01□□□□□ -0.97
NEDD9-208ENST00000504387 TNNT3P45378 269 aaPredicted RBP9.01□□□□□ -0.97
NEDD9-208ENST00000504387 RBM6P78332 1123 aaKnown RBP9.01□□□□□ -0.97
NEDD9-208ENST00000504387 GOLGA8FQ08AF8 430 aa9.01□□□□□ -0.97
NEDD9-208ENST00000504387 GOLGA8DPQ0D2H9 430 aa9.01□□□□□ -0.97
NEDD9-208ENST00000504387 MTHFSDQ2M296 383 aaKnown RBP9.01□□□□□ -0.97
NEDD9-208ENST00000504387 FAM135BQ49AJ0 1406 aa9.01□□□□□ -0.97
NEDD9-208ENST00000504387 CHMP4CQ96CF2 233 aa9.01□□□□□ -0.97
NEDD9-208ENST00000504387 CCDC34Q96HJ3 373 aa9.01□□□□□ -0.97
NEDD9-208ENST00000504387 ACEP12821 1306 aa9□□□□□ -0.97
NEDD9-208ENST00000504387 RAD50Q92878 1312 aa9□□□□□ -0.97
NEDD9-208ENST00000504387 CCDC69A6NI79 296 aa9□□□□□ -0.97
NEDD9-208ENST00000504387 SGSM2O43147 1006 aa9□□□□□ -0.97
NEDD9-208ENST00000504387 SEC31AO94979 1220 aaKnown RBP9□□□□□ -0.97
NEDD9-208ENST00000504387 CHGBP05060 677 aa9□□□□□ -0.97
NEDD9-208ENST00000504387 EDC3Q96F86 508 aaKnown RBP9□□□□□ -0.97
NEDD9-208ENST00000504387 ADGRB2O60241 1585 aa9□□□□□ -0.97
NEDD9-208ENST00000504387 POGZQ7Z3K3 1410 aa9□□□□□ -0.97
NEDD9-208ENST00000504387 CHL1O00533 1208 aa9□□□□□ -0.97
NEDD9-208ENST00000504387 NBPF7P0C2Y1 421 aaPredicted RBP9□□□□□ -0.97
NEDD9-208ENST00000504387 HNRNPH2P55795 449 aaKnown RBP9□□□□□ -0.97
NEDD9-208ENST00000504387 ANAPC15P60006 121 aa9□□□□□ -0.97
NEDD9-208ENST00000504387 ST3GAL1Q11201 340 aa9□□□□□ -0.97
NEDD9-208ENST00000504387 AIMP1Q12904 312 aaKnown RBP9□□□□□ -0.97
NEDD9-208ENST00000504387 GNL2Q13823 731 aaKnown RBP9□□□□□ -0.97
NEDD9-208ENST00000504387 STK11IPQ8N1F8 1099 aa9□□□□□ -0.97
NEDD9-208ENST00000504387 RHPN1Q8TCX5 695 aa9□□□□□ -0.97
NEDD9-208ENST00000504387 NOL10Q9BSC4 688 aaKnown RBP9□□□□□ -0.97
NEDD9-208ENST00000504387 CCDC8Q9H0W5 538 aaPredicted RBP9□□□□□ -0.97
NEDD9-208ENST00000504387 DEPDC5O75140 1603 aa9□□□□□ -0.97
NEDD9-208ENST00000504387 H3BQV1 296 aa8.99□□□□□ -0.97
NEDD9-208ENST00000504387 SMC2O95347 1197 aa8.99□□□□□ -0.97
NEDD9-208ENST00000504387 IFIT2P09913 472 aaKnown RBP8.99□□□□□ -0.97
NEDD9-208ENST00000504387 CCT4P50991 539 aaKnown RBP8.99□□□□□ -0.97
NEDD9-208ENST00000504387 ATP8B2P98198 1209 aa8.99□□□□□ -0.97
NEDD9-208ENST00000504387 IFFO2Q5TF58 517 aa8.99□□□□□ -0.97
NEDD9-208ENST00000504387 LSG1Q9H089 658 aaKnown RBP8.99□□□□□ -0.97
NEDD9-208ENST00000504387 ZSWIM4Q9H7M6 989 aa8.99□□□□□ -0.97
NEDD9-208ENST00000504387 SOS1Q07889 1333 aaPredicted RBP8.99□□□□□ -0.97
NEDD9-208ENST00000504387 COL3A1P02461 1466 aaPredicted RBP8.99□□□□□ -0.97
NEDD9-208ENST00000504387 CNTROBQ8N137 903 aa8.99□□□□□ -0.97
NEDD9-208ENST00000504387 TTC14Q96N46 770 aa8.99□□□□□ -0.97
NEDD9-208ENST00000504387 OSBPL3Q9H4L5 887 aa8.99□□□□□ -0.97
NEDD9-208ENST00000504387 CCDC66A2RUB6 948 aa8.99□□□□□ -0.97
NEDD9-208ENST00000504387 CAPN2P17655 700 aa8.99□□□□□ -0.97
NEDD9-208ENST00000504387 HAP1P54257 671 aaPredicted RBP8.99□□□□□ -0.97
NEDD9-208ENST00000504387 LRRC8AQ8IWT6 810 aa8.99□□□□□ -0.97
NEDD9-208ENST00000504387 BOLA2Q9H3K6 86 aa8.99□□□□□ -0.97
NEDD9-208ENST00000504387 ARHGAP31Q2M1Z3 1444 aa8.98□□□□□ -0.97
NEDD9-208ENST00000504387 ANKRD65E5RJM6 399 aa8.98□□□□□ -0.97
NEDD9-208ENST00000504387 TPM3P06753 285 aa8.98□□□□□ -0.97
NEDD9-208ENST00000504387 ARHGAP29Q52LW3 1261 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms