RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 IREB2P48200 963 aaKnown RBP5.74□□□□□ -1.49
HMGB3P17-201ENST00000504195 PROCA1Q8NCQ7 364 aaPredicted RBP5.74□□□□□ -1.49
HMGB3P17-201ENST00000504195 WFDC12Q8WWY7 111 aa5.74□□□□□ -1.49
HMGB3P17-201ENST00000504195 DDRGK1Q96HY6 314 aa5.74□□□□□ -1.49
HMGB3P17-201ENST00000504195 KRTAP4-5Q9BYR2 181 aa5.74□□□□□ -1.49
HMGB3P17-201ENST00000504195 ETNK1Q9HBU6 452 aa5.74□□□□□ -1.49
HMGB3P17-201ENST00000504195 ZDHHC3Q9NYG2 299 aa5.74□□□□□ -1.49
HMGB3P17-201ENST00000504195 FBXO31Q5XUX0 539 aaPredicted RBP5.73□□□□□ -1.49
HMGB3P17-201ENST00000504195 FMR1NBQ8N0W7 255 aaPredicted RBP5.73□□□□□ -1.49
HMGB3P17-201ENST00000504195 ZIC5Q96T25 663 aa5.73□□□□□ -1.49
HMGB3P17-201ENST00000504195 JPH1Q9HDC5 661 aaPredicted RBP5.73□□□□□ -1.49
HMGB3P17-201ENST00000504195 C20orf204Q6ZNR8 217 aa5.72□□□□□ -1.49
HMGB3P17-201ENST00000504195 KIAA1324LA8MWY0 1029 aaPredicted RBP5.71□□□□□ -1.5
HMGB3P17-201ENST00000504195 NR1H3Q13133 447 aa5.71□□□□□ -1.5
HMGB3P17-201ENST00000504195 TMEM259Q4ZIN3 620 aa5.71□□□□□ -1.5
HMGB3P17-201ENST00000504195 TRIM34Q9BYJ4 488 aa5.71□□□□□ -1.5
HMGB3P17-201ENST00000504195 SLC24A3Q9HC58 644 aa5.71□□□□□ -1.5
HMGB3P17-201ENST00000504195 STAU1O95793 577 aaKnown RBP5.7□□□□□ -1.5
HMGB3P17-201ENST00000504195 RFC5P40937 340 aa5.7□□□□□ -1.5
HMGB3P17-201ENST00000504195 TBC1D8BQ0IIM8 1120 aa5.7□□□□□ -1.5
HMGB3P17-201ENST00000504195 MEGF10Q96KG7 1140 aa5.7□□□□□ -1.5
HMGB3P17-201ENST00000504195 CDCA7Q9BWT1 371 aaPredicted RBP5.7□□□□□ -1.5
HMGB3P17-201ENST00000504195 NEUROD4Q9HD90 331 aa5.7□□□□□ -1.5
HMGB3P17-201ENST00000504195 GSC2O15499 205 aa5.69□□□□□ -1.5
HMGB3P17-201ENST00000504195 NOS3P29474 1203 aa5.69□□□□□ -1.5
HMGB3P17-201ENST00000504195 SPEM2Q0P670 501 aa5.69□□□□□ -1.5
HMGB3P17-201ENST00000504195 OGFOD2Q6N063 350 aa5.69□□□□□ -1.5
HMGB3P17-201ENST00000504195 DMRTC2Q8IXT2 367 aaPredicted RBP5.69□□□□□ -1.5
HMGB3P17-201ENST00000504195 SLC30A3Q99726 388 aa5.69□□□□□ -1.5
HMGB3P17-201ENST00000504195 GRIK1P39086 918 aa5.68□□□□□ -1.5
HMGB3P17-201ENST00000504195 USP4Q13107 963 aa5.68□□□□□ -1.5
HMGB3P17-201ENST00000504195 RAB44Q7Z6P3 723 aaPredicted RBP5.68□□□□□ -1.5
HMGB3P17-201ENST00000504195 NUDT8Q8WV74 236 aa5.68□□□□□ -1.5
HMGB3P17-201ENST00000504195 UBE2OQ9C0C9 1292 aaKnown RBP5.68□□□□□ -1.5
HMGB3P17-201ENST00000504195 CABP1Q9NZU7 370 aa5.68□□□□□ -1.5
HMGB3P17-201ENST00000504195 TGFB1P01137 390 aa5.67□□□□□ -1.5
HMGB3P17-201ENST00000504195 C8AP07357 584 aa5.67□□□□□ -1.5
HMGB3P17-201ENST00000504195 GDF10P55107 478 aa5.67□□□□□ -1.5
HMGB3P17-201ENST00000504195 CCDC85AQ96PX6 553 aaPredicted RBP5.67□□□□□ -1.5
HMGB3P17-201ENST00000504195 MED26O95402 600 aa5.66□□□□□ -1.5
HMGB3P17-201ENST00000504195 INHAP05111 366 aa5.66□□□□□ -1.5
HMGB3P17-201ENST00000504195 SMTNP53814 917 aa5.66□□□□□ -1.5
HMGB3P17-201ENST00000504195 SFSWAPQ12872 951 aaKnown RBP5.66□□□□□ -1.5
HMGB3P17-201ENST00000504195 LCE4AQ5TA78 99 aa5.66□□□□□ -1.5
HMGB3P17-201ENST00000504195 LRRC69Q6ZNQ3 347 aa5.66□□□□□ -1.5
HMGB3P17-201ENST00000504195 DTWD1Q8N5C7 304 aa5.66□□□□□ -1.5
HMGB3P17-201ENST00000504195 SIRT1Q96EB6 747 aa5.66□□□□□ -1.5
HMGB3P17-201ENST00000504195 DOLKQ9UPQ8 538 aa5.66□□□□□ -1.5
HMGB3P17-201ENST00000504195 IGFLR1Q9H665 355 aa5.65□□□□□ -1.5
HMGB3P17-201ENST00000504195 WNT11O96014 354 aa5.64□□□□□ -1.51
HMGB3P17-201ENST00000504195 IGLV1-40P01703 118 aa5.64□□□□□ -1.51
HMGB3P17-201ENST00000504195 AFF1P51825 1210 aaKnown RBP5.64□□□□□ -1.51
HMGB3P17-201ENST00000504195 INTS5Q6P9B9 1019 aaKnown RBP5.64□□□□□ -1.51
HMGB3P17-201ENST00000504195 IGF2-ASQ6U949 168 aa5.64□□□□□ -1.51
HMGB3P17-201ENST00000504195 GJD4Q96KN9 370 aaPredicted RBP5.64□□□□□ -1.51
HMGB3P17-201ENST00000504195 SLC6A14Q9UN76 642 aa5.64□□□□□ -1.51
HMGB3P17-201ENST00000504195 SOCS7O14512 581 aa5.63□□□□□ -1.51
HMGB3P17-201ENST00000504195 RGS9O75916 674 aaPredicted RBP5.63□□□□□ -1.51
HMGB3P17-201ENST00000504195 OXLD1Q5BKU9 147 aa5.63□□□□□ -1.51
HMGB3P17-201ENST00000504195 PSAPL1Q6NUJ1 521 aa5.63□□□□□ -1.51
HMGB3P17-201ENST00000504195 FBXO11Q86XK2 927 aa5.63□□□□□ -1.51
HMGB3P17-201ENST00000504195 BHMTQ93088 406 aa5.63□□□□□ -1.51
HMGB3P17-201ENST00000504195 KRTAP17-1Q9BYP8 105 aa5.63□□□□□ -1.51
HMGB3P17-201ENST00000504195 KDM4CQ9H3R0 1056 aa5.63□□□□□ -1.51
HMGB3P17-201ENST00000504195 GOPCQ9HD26 462 aa5.63□□□□□ -1.51
HMGB3P17-201ENST00000504195 CEP126Q9P2H0 1117 aa5.63□□□□□ -1.51
HMGB3P17-201ENST00000504195 SPINK2P20155 84 aa5.62□□□□□ -1.51
HMGB3P17-201ENST00000504195 SCNN1DP51172 638 aa5.62□□□□□ -1.51
HMGB3P17-201ENST00000504195 POU5F2Q8N7G0 328 aa5.62□□□□□ -1.51
HMGB3P17-201ENST00000504195 FAM117AQ9C073 453 aa5.62□□□□□ -1.51
HMGB3P17-201ENST00000504195 AKTIPQ9H8T0 292 aa5.62□□□□□ -1.51
HMGB3P17-201ENST00000504195 SERTAD1Q9UHV2 236 aa5.62□□□□□ -1.51
HMGB3P17-201ENST00000504195 ADGRE2Q9UHX3 823 aa5.62□□□□□ -1.51
HMGB3P17-201ENST00000504195 APBB1O00213 710 aa5.61□□□□□ -1.51
HMGB3P17-201ENST00000504195 CDK2AP1O14519 115 aa5.61□□□□□ -1.51
HMGB3P17-201ENST00000504195 MSL1Q68DK7 614 aa5.61□□□□□ -1.51
HMGB3P17-201ENST00000504195 DZIP1LQ8IYY4 767 aaKnown RBP5.61□□□□□ -1.51
HMGB3P17-201ENST00000504195 CCER1Q8TC90 406 aaPredicted RBP5.61□□□□□ -1.51
HMGB3P17-201ENST00000504195 PCMTD1Q96MG8 357 aaPredicted RBP5.61□□□□□ -1.51
HMGB3P17-201ENST00000504195 BRD7Q9NPI1 651 aa5.61□□□□□ -1.51
HMGB3P17-201ENST00000504195 RAXQ9Y2V3 346 aa5.61□□□□□ -1.51
HMGB3P17-201ENST00000504195 PARP3Q9Y6F1 533 aa5.61□□□□□ -1.51
HMGB3P17-201ENST00000504195 A6NJY4 79 aa5.6□□□□□ -1.51
HMGB3P17-201ENST00000504195 TXLNAP40222 546 aa5.6□□□□□ -1.51
HMGB3P17-201ENST00000504195 FBLN7Q53RD9 439 aa5.6□□□□□ -1.51
HMGB3P17-201ENST00000504195 ASIC4Q96FT7 647 aa5.6□□□□□ -1.51
HMGB3P17-201ENST00000504195 GPC6Q9Y625 555 aaPredicted RBP5.6□□□□□ -1.51
HMGB3P17-201ENST00000504195 ADAMTS4O75173 837 aa5.59□□□□□ -1.51
HMGB3P17-201ENST00000504195 ZNF295-AS1Q8N0V1 137 aa5.59□□□□□ -1.51
HMGB3P17-201ENST00000504195 CEP63Q96MT8 703 aa5.59□□□□□ -1.51
HMGB3P17-201ENST00000504195 STOML1Q9UBI4 398 aa5.59□□□□□ -1.51
HMGB3P17-201ENST00000504195 IQSEC3Q9UPP2 1182 aaPredicted RBP5.59□□□□□ -1.51
HMGB3P17-201ENST00000504195 NDUFB9Q9Y6M9 179 aa5.59□□□□□ -1.51
HMGB3P17-201ENST00000504195 MTFR1Q15390 333 aa5.58□□□□□ -1.52
HMGB3P17-201ENST00000504195 SLFNL1Q499Z3 407 aa5.58□□□□□ -1.52
HMGB3P17-201ENST00000504195 DTX1Q86Y01 620 aa5.58□□□□□ -1.52
HMGB3P17-201ENST00000504195 WFDC8Q8IUA0 241 aa5.58□□□□□ -1.52
HMGB3P17-201ENST00000504195 KCNH4Q9UQ05 1017 aa5.58□□□□□ -1.52
HMGB3P17-201ENST00000504195 RHPN1Q8TCX5 695 aa5.57□□□□□ -1.52
HMGB3P17-201ENST00000504195 USP3Q9Y6I4 520 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms