RNA–Protein interactions for RNA: ENST00000502706.1

RFC1-204, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 690 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-204ENST00000502706 RRAGCQ9HB90 399 aa8.82□□□□□ -1
RFC1-204ENST00000502706 GDF2Q9UK05 429 aaPredicted RBP8.82□□□□□ -1
RFC1-204ENST00000502706 CCDC88BA6NC98 1476 aa8.82□□□□□ -1
RFC1-204ENST00000502706 USP17L3A6NCW0 530 aa8.81□□□□□ -1
RFC1-204ENST00000502706 USP17L4A6NCW7 530 aa8.81□□□□□ -1
RFC1-204ENST00000502706 SPATA31C2B4DYI2 1134 aa8.81□□□□□ -1
RFC1-204ENST00000502706 USP17L2Q6R6M4 530 aa8.81□□□□□ -1
RFC1-204ENST00000502706 USP17L1Q7RTZ2 530 aa8.81□□□□□ -1
RFC1-204ENST00000502706 CLP1Q92989 425 aaKnown RBP8.81□□□□□ -1
RFC1-204ENST00000502706 ABCC8Q09428 1581 aa8.81□□□□□ -1
RFC1-204ENST00000502706 GRIN2CQ14957 1233 aa8.8□□□□□ -1
RFC1-204ENST00000502706 C1orf229Q6ZS94 237 aaPredicted RBP8.8□□□□□ -1
RFC1-204ENST00000502706 PLEKHM2Q8IWE5 1019 aa8.8□□□□□ -1
RFC1-204ENST00000502706 FAM200AQ8TCP9 573 aa8.8□□□□□ -1
RFC1-204ENST00000502706 EDARADDQ8WWZ3 215 aa8.8□□□□□ -1
RFC1-204ENST00000502706 KLRG1Q96E93 195 aa8.8□□□□□ -1
RFC1-204ENST00000502706 TIMMDC1Q9NPL8 285 aa8.8□□□□□ -1
RFC1-204ENST00000502706 DNMBPQ6XZF7 1577 aa8.8□□□□□ -1
RFC1-204ENST00000502706 USP17L15C9J2P7 530 aa8.79□□□□□ -1
RFC1-204ENST00000502706 USP17L10C9JJH3 530 aa8.79□□□□□ -1
RFC1-204ENST00000502706 USP17L13C9JLJ4 530 aa8.79□□□□□ -1
RFC1-204ENST00000502706 USP17L12C9JPN9 530 aa8.79□□□□□ -1
RFC1-204ENST00000502706 USP17L11C9JVI0 530 aa8.79□□□□□ -1
RFC1-204ENST00000502706 USP17L21D6R901 530 aa8.79□□□□□ -1
RFC1-204ENST00000502706 USP17L18D6R9N7 530 aa8.79□□□□□ -1
RFC1-204ENST00000502706 USP17L22D6RA61 530 aa8.79□□□□□ -1
RFC1-204ENST00000502706 USP17L17D6RBQ6 530 aa8.79□□□□□ -1
RFC1-204ENST00000502706 USP17L19D6RCP7 530 aa8.79□□□□□ -1
RFC1-204ENST00000502706 USP17L20D6RJB6 530 aa8.79□□□□□ -1
RFC1-204ENST00000502706 PIK3R2O00459 728 aa8.79□□□□□ -1
RFC1-204ENST00000502706 ATP2B4P23634 1241 aa8.79□□□□□ -1
RFC1-204ENST00000502706 USP17L24Q0WX57 530 aa8.79□□□□□ -1
RFC1-204ENST00000502706 NAALADL2Q58DX5 795 aa8.79□□□□□ -1
RFC1-204ENST00000502706 LARP1Q6PKG0 1096 aaKnown RBP8.79□□□□□ -1
RFC1-204ENST00000502706 PHF24Q9UPV7 400 aa8.79□□□□□ -1
RFC1-204ENST00000502706 CHD1O14646 1710 aa8.79□□□□□ -1
RFC1-204ENST00000502706 USP17L5A8MUK1 530 aa8.78□□□□□ -1
RFC1-204ENST00000502706 SKIP12755 728 aa8.78□□□□□ -1
RFC1-204ENST00000502706 ERVK-9P63128 1117 aa8.78□□□□□ -1
RFC1-204ENST00000502706 NR1H3Q13133 447 aa8.78□□□□□ -1
RFC1-204ENST00000502706 CLN3Q13286 438 aa8.78□□□□□ -1
RFC1-204ENST00000502706 TAS1R3Q7RTX0 852 aa8.78□□□□□ -1
RFC1-204ENST00000502706 GOLGA6L1Q8N7Z2 621 aa8.78□□□□□ -1
RFC1-204ENST00000502706 CDCA7Q9BWT1 371 aaPredicted RBP8.78□□□□□ -1
RFC1-204ENST00000502706 C1QTNF9BB2RNN3 333 aa8.77□□□□□ -1.01
RFC1-204ENST00000502706 WASLO00401 505 aaPredicted RBP8.77□□□□□ -1.01
RFC1-204ENST00000502706 CC2D2BQ6DHV5 1058 aa8.77□□□□□ -1.01
RFC1-204ENST00000502706 LINC00114Q6XXX2 140 aa8.77□□□□□ -1.01
RFC1-204ENST00000502706 SLAIN2Q9P270 581 aa8.77□□□□□ -1.01
RFC1-204ENST00000502706 TARBP1Q13395 1621 aaKnown RBP8.76□□□□□ -1.01
RFC1-204ENST00000502706 PIK3CDO00329 1044 aa8.76□□□□□ -1.01
RFC1-204ENST00000502706 GIGYF1O75420 1035 aaPredicted RBP8.76□□□□□ -1.01
RFC1-204ENST00000502706 THBS1P07996 1170 aa8.76□□□□□ -1.01
RFC1-204ENST00000502706 CRTC2Q53ET0 693 aaPredicted RBP8.76□□□□□ -1.01
RFC1-204ENST00000502706 CYB5RLQ6IPT4 315 aa8.76□□□□□ -1.01
RFC1-204ENST00000502706 CYP2U1Q7Z449 544 aa8.76□□□□□ -1.01
RFC1-204ENST00000502706 ANKRD13AQ8IZ07 590 aa8.76□□□□□ -1.01
RFC1-204ENST00000502706 POLR3GLQ9BT43 218 aa8.76□□□□□ -1.01
RFC1-204ENST00000502706 SUV39H2Q9H5I1 410 aa8.76□□□□□ -1.01
RFC1-204ENST00000502706 MKRN1Q9UHC7 482 aaKnown RBP8.76□□□□□ -1.01
RFC1-204ENST00000502706 AQRO60306 1485 aaKnown RBP eCLIP8.76□□□□□ -1.017e-7■■■■□ 26.1
RFC1-204ENST00000502706 GNB5O14775 395 aa8.75□□□□□ -1.01
RFC1-204ENST00000502706 HOXB4P17483 251 aaPredicted RBP8.75□□□□□ -1.01
RFC1-204ENST00000502706 RASA1P20936 1047 aa8.75□□□□□ -1.01
RFC1-204ENST00000502706 FAM69CQ0P6D2 419 aa8.75□□□□□ -1.01
RFC1-204ENST00000502706 ARAP1Q96P48 1450 aa8.75□□□□□ -1.01
RFC1-204ENST00000502706 AMPD1P23109 780 aa8.74□□□□□ -1.01
RFC1-204ENST00000502706 PTK7Q13308 1070 aa8.74□□□□□ -1.01
RFC1-204ENST00000502706 SWI5Q1ZZU3 235 aa8.74□□□□□ -1.01
RFC1-204ENST00000502706 CD163Q86VB7 1156 aa8.74□□□□□ -1.01
RFC1-204ENST00000502706 POLA1P09884 1462 aaPredicted RBP8.73□□□□□ -1.01
RFC1-204ENST00000502706 RECKO95980 971 aa8.73□□□□□ -1.01
RFC1-204ENST00000502706 LBRQ14739 615 aaKnown RBP8.73□□□□□ -1.01
RFC1-204ENST00000502706 SLCO4C1Q6ZQN7 724 aa8.73□□□□□ -1.01
RFC1-204ENST00000502706 FBXO33Q7Z6M2 555 aa8.73□□□□□ -1.01
RFC1-204ENST00000502706 DEPDC4Q8N2C3 294 aa8.73□□□□□ -1.01
RFC1-204ENST00000502706 C1orf216Q8TAB5 229 aa8.73□□□□□ -1.01
RFC1-204ENST00000502706 ITGB7P26010 798 aa8.72□□□□□ -1.01
RFC1-204ENST00000502706 ERCC5P28715 1186 aaPredicted RBP8.72□□□□□ -1.01
RFC1-204ENST00000502706 TSNAXIP1Q2TAA8 658 aa8.72□□□□□ -1.01
RFC1-204ENST00000502706 RNF20Q5VTR2 975 aa8.72□□□□□ -1.01
RFC1-204ENST00000502706 KRTAP1-3Q8IUG1 177 aa8.72□□□□□ -1.01
RFC1-204ENST00000502706 ANKMY2Q8IV38 441 aa8.72□□□□□ -1.01
RFC1-204ENST00000502706 NOP53Q9NZM5 478 aaKnown RBP8.72□□□□□ -1.01
RFC1-204ENST00000502706 EGFL7Q9UHF1 273 aa8.72□□□□□ -1.01
RFC1-204ENST00000502706 PCDHB9Q9Y5E1 797 aa8.72□□□□□ -1.01
RFC1-204ENST00000502706 A0A1B0GTH6 734 aa8.71□□□□□ -1.02
RFC1-204ENST00000502706 ZBBXA8MT70 800 aa8.71□□□□□ -1.02
RFC1-204ENST00000502706 FBXO45P0C2W1 286 aa8.71□□□□□ -1.02
RFC1-204ENST00000502706 CHRNA4P43681 627 aa8.71□□□□□ -1.02
RFC1-204ENST00000502706 ARHGEF10LQ9HCE6 1279 aa8.71□□□□□ -1.02
RFC1-204ENST00000502706 GPAMQ9HCL2 828 aa8.71□□□□□ -1.02
RFC1-204ENST00000502706 ATXN7L1Q9ULK2 861 aaPredicted RBP8.71□□□□□ -1.02
RFC1-204ENST00000502706 ANKRD62A6NC57 917 aa8.7□□□□□ -1.02
RFC1-204ENST00000502706 LZTS3O60299 673 aaPredicted RBP8.7□□□□□ -1.02
RFC1-204ENST00000502706 ABL1P00519 1130 aa8.7□□□□□ -1.02
RFC1-204ENST00000502706 BMP4P12644 408 aa8.7□□□□□ -1.02
RFC1-204ENST00000502706 MAPK1P28482 360 aa8.7□□□□□ -1.02
RFC1-204ENST00000502706 UBAP2LQ14157 1087 aaKnown RBP8.7□□□□□ -1.02
RFC1-204ENST00000502706 ZMYM1Q5SVZ6 1142 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms