RNA–Protein interactions for RNA: ENST00000497318.1

SUPT20H-223, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 3

Gene SUPT20H, Length 734 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-223ENST00000497318 CAMTA2O94983 1202 aa22.33■■□□□ 1.17
SUPT20H-223ENST00000497318 A1BGP04217 495 aa22.33■■□□□ 1.17
SUPT20H-223ENST00000497318 NBPF5PQ86XG9 351 aaPredicted RBP22.33■■□□□ 1.17
SUPT20H-223ENST00000497318 IL17REQ8NFR9 667 aa22.33■■□□□ 1.17
SUPT20H-223ENST00000497318 PCGF6Q9BYE7 350 aa22.33■■□□□ 1.17
SUPT20H-223ENST00000497318 NPR1P16066 1061 aa22.32■■□□□ 1.16
SUPT20H-223ENST00000497318 VEGFBP49765 207 aa22.32■■□□□ 1.16
SUPT20H-223ENST00000497318 EAPPQ56P03 285 aaPredicted RBP22.32■■□□□ 1.16
SUPT20H-223ENST00000497318 CLEC4GQ6UXB4 293 aa22.32■■□□□ 1.16
SUPT20H-223ENST00000497318 DZIP3Q86Y13 1208 aaKnown RBP22.32■■□□□ 1.16
SUPT20H-223ENST00000497318 CLEC11AQ9Y240 323 aa22.32■■□□□ 1.16
SUPT20H-223ENST00000497318 ZNF652Q9Y2D9 606 aa22.32■■□□□ 1.16
SUPT20H-223ENST00000497318 PNMA8AQ86V59 439 aaPredicted RBP22.31■■□□□ 1.16
SUPT20H-223ENST00000497318 HACL1Q9UJ83 578 aa22.31■■□□□ 1.16
SUPT20H-223ENST00000497318 U2SURPO15042 1029 aaKnown RBP22.3■■□□□ 1.16
SUPT20H-223ENST00000497318 RTKN2Q8IZC4 609 aa22.3■■□□□ 1.16
SUPT20H-223ENST00000497318 C7orf43Q8WVR3 580 aa22.3■■□□□ 1.16
SUPT20H-223ENST00000497318 FER1L6Q2WGJ9 1857 aa22.29■■□□□ 1.16
SUPT20H-223ENST00000497318 ITGBL1O95965 494 aaPredicted RBP22.29■■□□□ 1.16
SUPT20H-223ENST00000497318 FKBP4Q02790 459 aaKnown RBP eCLIP22.29■■□□□ 1.16
SUPT20H-223ENST00000497318 TPTE2Q6XPS3 522 aa22.29■■□□□ 1.16
SUPT20H-223ENST00000497318 WBP1LQ9NX94 342 aa22.29■■□□□ 1.16
SUPT20H-223ENST00000497318 DICER1Q9UPY3 1922 aaKnown RBP22.28■■□□□ 1.16
SUPT20H-223ENST00000497318 BTBD11A6QL63 1104 aa22.28■■□□□ 1.16
SUPT20H-223ENST00000497318 UBR2Q8IWV8 1755 aa22.27■■□□□ 1.16
SUPT20H-223ENST00000497318 EPHX2P34913 555 aa22.27■■□□□ 1.16
SUPT20H-223ENST00000497318 ANKRD31Q8N7Z5 1873 aa22.27■■□□□ 1.16
SUPT20H-223ENST00000497318 LBX1P52954 281 aa22.26■■□□□ 1.15
SUPT20H-223ENST00000497318 MAP2K1Q02750 393 aaPredicted RBP22.26■■□□□ 1.15
SUPT20H-223ENST00000497318 DEFB115Q30KQ5 88 aa22.26■■□□□ 1.15
SUPT20H-223ENST00000497318 CC2D1BQ5T0F9 858 aaKnown RBP22.26■■□□□ 1.15
SUPT20H-223ENST00000497318 ZNF277Q9NRM2 450 aaPredicted RBP22.26■■□□□ 1.15
SUPT20H-223ENST00000497318 SCN7AQ01118 1682 aa22.24■■□□□ 1.15
SUPT20H-223ENST00000497318 KLRG2A4D1S0 409 aaPredicted RBP22.24■■□□□ 1.15
SUPT20H-223ENST00000497318 RGL2O15211 777 aa22.24■■□□□ 1.15
SUPT20H-223ENST00000497318 ALDH1B1P30837 517 aa22.24■■□□□ 1.15
SUPT20H-223ENST00000497318 CNTROBQ8N137 903 aa22.24■■□□□ 1.15
SUPT20H-223ENST00000497318 SLX4Q8IY92 1834 aa22.24■■□□□ 1.15
SUPT20H-223ENST00000497318 COL11A2P13942 1736 aaPredicted RBP22.23■■□□□ 1.15
SUPT20H-223ENST00000497318 RASSF10A6NK89 507 aa22.23■■□□□ 1.15
SUPT20H-223ENST00000497318 JDP2Q8WYK2 163 aa22.23■■□□□ 1.15
SUPT20H-223ENST00000497318 USP16Q9Y5T5 823 aa22.23■■□□□ 1.15
SUPT20H-223ENST00000497318 ZNF541Q9H0D2 1346 aa22.23■■□□□ 1.15
SUPT20H-223ENST00000497318 SNRPA1P09661 255 aaKnown RBP22.22■■□□□ 1.15
SUPT20H-223ENST00000497318 GTF2E1P29083 439 aaPredicted RBP22.22■■□□□ 1.15
SUPT20H-223ENST00000497318 GPC2Q8N158 579 aa22.22■■□□□ 1.15
SUPT20H-223ENST00000497318 ABT1Q9ULW3 272 aaKnown RBP22.22■■□□□ 1.15
SUPT20H-223ENST00000497318 NIP7Q9Y221 180 aaKnown RBP eCLIP22.22■■□□□ 1.15
SUPT20H-223ENST00000497318 SCN4AP35499 1836 aa22.22■■□□□ 1.15
SUPT20H-223ENST00000497318 FZD9O00144 591 aa22.21■■□□□ 1.15
SUPT20H-223ENST00000497318 PER1O15534 1290 aaPredicted RBP22.21■■□□□ 1.15
SUPT20H-223ENST00000497318 IARSP41252 1262 aaKnown RBP22.21■■□□□ 1.15
SUPT20H-223ENST00000497318 MAP1SQ66K74 1059 aaPredicted RBP22.21■■□□□ 1.15
SUPT20H-223ENST00000497318 SYNE4Q8N205 404 aa22.21■■□□□ 1.15
SUPT20H-223ENST00000497318 CEMIPQ8WUJ3 1361 aa22.21■■□□□ 1.15
SUPT20H-223ENST00000497318 KCNQ3O43525 872 aa22.2■■□□□ 1.14
SUPT20H-223ENST00000497318 RTF1Q92541 710 aaKnown RBP22.2■■□□□ 1.14
SUPT20H-223ENST00000497318 BEGAINQ9BUH8 593 aa22.2■■□□□ 1.14
SUPT20H-223ENST00000497318 KIF7Q2M1P5 1343 aa22.2■■□□□ 1.14
SUPT20H-223ENST00000497318 WDR33Q9C0J8 1336 aaKnown RBP22.2■■□□□ 1.14
SUPT20H-223ENST00000497318 ABHD8Q96I13 439 aa22.19■■□□□ 1.14
SUPT20H-223ENST00000497318 RNF123Q5XPI4 1314 aa22.19■■□□□ 1.14
SUPT20H-223ENST00000497318 HSPA8P11142 646 aaKnown RBP22.18■■□□□ 1.14
SUPT20H-223ENST00000497318 LMOD1P29536 600 aaPredicted RBP22.18■■□□□ 1.14
SUPT20H-223ENST00000497318 PIP4K2AP48426 406 aaPredicted RBP22.18■■□□□ 1.14
SUPT20H-223ENST00000497318 EIF6P56537 245 aaKnown RBP22.18■■□□□ 1.14
SUPT20H-223ENST00000497318 CC2D2BQ6DHV5 1058 aa22.18■■□□□ 1.14
SUPT20H-223ENST00000497318 VIRMAQ69YN4 1812 aaKnown RBP22.17■■□□□ 1.14
SUPT20H-223ENST00000497318 CFAP53Q96M91 514 aa22.17■■□□□ 1.14
SUPT20H-223ENST00000497318 PSMD1Q99460 953 aa22.17■■□□□ 1.14
SUPT20H-223ENST00000497318 FAM177BA6PVY3 158 aa22.16■■□□□ 1.14
SUPT20H-223ENST00000497318 ECE1P42892 770 aa22.16■■□□□ 1.14
SUPT20H-223ENST00000497318 GRIPAP1Q4V328 841 aa22.16■■□□□ 1.14
SUPT20H-223ENST00000497318 OLFM4Q6UX06 510 aa22.16■■□□□ 1.14
SUPT20H-223ENST00000497318 PHACTR3Q96KR7 559 aa22.16■■□□□ 1.14
SUPT20H-223ENST00000497318 DDX21Q9NR30 783 aaKnown RBP eCLIP22.16■■□□□ 1.14
SUPT20H-223ENST00000497318 PRKAR2BP31323 418 aa22.15■■□□□ 1.14
SUPT20H-223ENST00000497318 NYXQ9GZU5 481 aa22.15■■□□□ 1.14
SUPT20H-223ENST00000497318 GJA3Q9Y6H8 435 aa22.15■■□□□ 1.14
SUPT20H-223ENST00000497318 NUDCQ9Y266 331 aa22.14■■□□□ 1.13
SUPT20H-223ENST00000497318 NPC1L1Q9UHC9 1359 aa22.13■■□□□ 1.13
SUPT20H-223ENST00000497318 ARFGEF2Q9Y6D5 1785 aa22.13■■□□□ 1.13
SUPT20H-223ENST00000497318 PRAMEF22A3QJZ6 481 aa22.13■■□□□ 1.13
SUPT20H-223ENST00000497318 CNGB1Q14028 1251 aaPredicted RBP22.13■■□□□ 1.13
SUPT20H-223ENST00000497318 PAXIP1Q6ZW49 1069 aaPredicted RBP22.13■■□□□ 1.13
SUPT20H-223ENST00000497318 SLC34A2O95436 690 aa22.12■■□□□ 1.13
SUPT20H-223ENST00000497318 COL3A1P02461 1466 aaPredicted RBP22.11■■□□□ 1.13
SUPT20H-223ENST00000497318 NBPF26B4DH59 902 aa22.11■■□□□ 1.13
SUPT20H-223ENST00000497318 CRY2Q49AN0 593 aa22.11■■□□□ 1.13
SUPT20H-223ENST00000497318 NBPF10Q6P3W6 841 aaKnown RBP22.11■■□□□ 1.13
SUPT20H-223ENST00000497318 NBPF15Q8N660 670 aa22.11■■□□□ 1.13
SUPT20H-223ENST00000497318 RPGRQ92834 1020 aaKnown RBP22.11■■□□□ 1.13
SUPT20H-223ENST00000497318 CAPNS2Q96L46 248 aa22.11■■□□□ 1.13
SUPT20H-223ENST00000497318 RSPH6AQ9H0K4 717 aa22.11■■□□□ 1.13
SUPT20H-223ENST00000497318 FAM161AQ3B820 660 aa22.1■■□□□ 1.13
SUPT20H-223ENST00000497318 USP50Q70EL3 339 aaPredicted RBP22.1■■□□□ 1.13
SUPT20H-223ENST00000497318 MCM10Q7L590 875 aa22.1■■□□□ 1.13
SUPT20H-223ENST00000497318 LARGE2Q8N3Y3 721 aa22.1■■□□□ 1.13
SUPT20H-223ENST00000497318 GPR101Q96P66 508 aaPredicted RBP22.1■■□□□ 1.13
SUPT20H-223ENST00000497318 TMX4Q9H1E5 349 aaPredicted RBP22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms