RNA–Protein interactions for RNA: ENST00000497179.1

USP11-212, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 900 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-212ENST00000497179 SLC4A2P04920 1241 aa18.54■□□□□ 0.56
USP11-212ENST00000497179 MSL1Q68DK7 614 aa18.54■□□□□ 0.56
USP11-212ENST00000497179 NLGN1Q8N2Q7 840 aa18.54■□□□□ 0.56
USP11-212ENST00000497179 ARXQ96QS3 562 aa18.54■□□□□ 0.56
USP11-212ENST00000497179 LRP5O75197 1615 aa18.53■□□□□ 0.56
USP11-212ENST00000497179 AIMP1Q12904 312 aaKnown RBP18.53■□□□□ 0.56
USP11-212ENST00000497179 FKBP8Q14318 412 aa18.53■□□□□ 0.56
USP11-212ENST00000497179 ALDH1L2Q3SY69 923 aa18.53■□□□□ 0.56
USP11-212ENST00000497179 PHAXQ9H814 394 aaKnown RBP18.53■□□□□ 0.56
USP11-212ENST00000497179 CLEC4GQ6UXB4 293 aa18.52■□□□□ 0.56
USP11-212ENST00000497179 G2E3Q7L622 706 aa18.52■□□□□ 0.56
USP11-212ENST00000497179 SSH1Q8WYL5 1049 aa18.52■□□□□ 0.56
USP11-212ENST00000497179 SGIP1Q9BQI5 828 aa18.52■□□□□ 0.56
USP11-212ENST00000497179 ZBTB3Q9H5J0 574 aa18.52■□□□□ 0.56
USP11-212ENST00000497179 SPON1Q9HCB6 807 aa18.52■□□□□ 0.56
USP11-212ENST00000497179 ATF5Q9Y2D1 282 aaPredicted RBP18.52■□□□□ 0.56
USP11-212ENST00000497179 ZNF652Q9Y2D9 606 aa18.52■□□□□ 0.56
USP11-212ENST00000497179 ARFGEF2Q9Y6D5 1785 aa18.52■□□□□ 0.55
USP11-212ENST00000497179 ATP10DQ9P241 1426 aa18.51■□□□□ 0.55
USP11-212ENST00000497179 PTGER2P43116 358 aa18.5■□□□□ 0.55
USP11-212ENST00000497179 RARSP54136 660 aaKnown RBP18.5■□□□□ 0.55
USP11-212ENST00000497179 FLIIQ13045 1269 aa18.5■□□□□ 0.55
USP11-212ENST00000497179 HLFQ16534 295 aa18.5■□□□□ 0.55
USP11-212ENST00000497179 MRPL50Q8N5N7 158 aaKnown RBP18.5■□□□□ 0.55
USP11-212ENST00000497179 PLBD2Q8NHP8 589 aa18.5■□□□□ 0.55
USP11-212ENST00000497179 NUP98P52948 1817 aa18.5■□□□□ 0.55
USP11-212ENST00000497179 ANKRD36CQ5JPF3 1778 aa18.5■□□□□ 0.55
USP11-212ENST00000497179 DDX58O95786 925 aaKnown RBP18.49■□□□□ 0.55
USP11-212ENST00000497179 POLD1P28340 1107 aa18.49■□□□□ 0.55
USP11-212ENST00000497179 TM4SF1P30408 202 aa18.49■□□□□ 0.55
USP11-212ENST00000497179 GIGYF2Q6Y7W6 1299 aaKnown RBP18.49■□□□□ 0.55
USP11-212ENST00000497179 ANKRD13DQ6ZTN6 518 aa18.49■□□□□ 0.55
USP11-212ENST00000497179 SMC4Q9NTJ3 1288 aa18.49■□□□□ 0.55
USP11-212ENST00000497179 ADCY9O60503 1353 aa18.48■□□□□ 0.55
USP11-212ENST00000497179 MMP10P09238 476 aa18.48■□□□□ 0.55
USP11-212ENST00000497179 NFIXQ14938 502 aa18.48■□□□□ 0.55
USP11-212ENST00000497179 TBC1D9BQ66K14 1250 aa18.48■□□□□ 0.55
USP11-212ENST00000497179 BRPF1P55201 1214 aaPredicted RBP18.47■□□□□ 0.55
USP11-212ENST00000497179 DDR1Q08345 913 aa18.47■□□□□ 0.55
USP11-212ENST00000497179 BCL2L13Q9BXK5 485 aa18.47■□□□□ 0.55
USP11-212ENST00000497179 NRXN2Q9P2S2 1712 aa18.46■□□□□ 0.55
USP11-212ENST00000497179 SRCAPQ6ZRS2 3230 aa18.46■□□□□ 0.55
USP11-212ENST00000497179 CARMIL3Q8ND23 1372 aa18.46■□□□□ 0.55
USP11-212ENST00000497179 FKBP5Q13451 457 aaPredicted RBP18.46■□□□□ 0.55
USP11-212ENST00000497179 HSP90AB3PQ58FF7 597 aa18.46■□□□□ 0.55
USP11-212ENST00000497179 KSR2Q6VAB6 950 aa18.46■□□□□ 0.55
USP11-212ENST00000497179 RIC3Q7Z5B4 369 aa18.46■□□□□ 0.55
USP11-212ENST00000497179 PI4KAP2A4QPH2 592 aa18.45■□□□□ 0.54
USP11-212ENST00000497179 POLRMTO00411 1230 aaKnown RBP18.45■□□□□ 0.54
USP11-212ENST00000497179 ZNF34Q8IZ26 560 aa18.45■□□□□ 0.54
USP11-212ENST00000497179 PI4KAP1Q8N8J0 262 aa18.45■□□□□ 0.54
USP11-212ENST00000497179 NIP7Q9Y221 180 aaKnown RBP eCLIP18.45■□□□□ 0.54
USP11-212ENST00000497179 PTPRCP08575 1304 aa18.45■□□□□ 0.54
USP11-212ENST00000497179 TCIRG1Q13488 830 aa18.44■□□□□ 0.54
USP11-212ENST00000497179 BICDL1Q6ZP65 573 aa18.44■□□□□ 0.54
USP11-212ENST00000497179 SETDB2Q96T68 719 aa18.44■□□□□ 0.54
USP11-212ENST00000497179 MAP3K2Q9Y2U5 619 aa18.44■□□□□ 0.54
USP11-212ENST00000497179 PARP3Q9Y6F1 533 aa18.44■□□□□ 0.54
USP11-212ENST00000497179 IBTKQ9P2D0 1353 aaPredicted RBP18.43■□□□□ 0.54
USP11-212ENST00000497179 ISCA1Q9BUE6 129 aa18.43■□□□□ 0.54
USP11-212ENST00000497179 METTL22Q9BUU2 404 aaPredicted RBP18.43■□□□□ 0.54
USP11-212ENST00000497179 AFDNP55196 1824 aaKnown RBP18.43■□□□□ 0.54
USP11-212ENST00000497179 UBN2Q6ZU65 1347 aa18.43■□□□□ 0.54
USP11-212ENST00000497179 KIF16BQ96L93 1317 aa18.43■□□□□ 0.54
USP11-212ENST00000497179 C10orf71Q711Q0 1435 aa18.42■□□□□ 0.54
USP11-212ENST00000497179 GPTP24298 496 aa18.42■□□□□ 0.54
USP11-212ENST00000497179 PARP10Q53GL7 1025 aa18.42■□□□□ 0.54
USP11-212ENST00000497179 PXDNLA1KZ92 1463 aa18.41■□□□□ 0.54
USP11-212ENST00000497179 BCAR3O75815 825 aa18.41■□□□□ 0.54
USP11-212ENST00000497179 SERPINB2P05120 415 aa18.41■□□□□ 0.54
USP11-212ENST00000497179 TRIM28Q13263 835 aaKnown RBP18.41■□□□□ 0.54
USP11-212ENST00000497179 DNAAF4Q8WXU2 420 aa18.41■□□□□ 0.54
USP11-212ENST00000497179 MYD88Q99836 296 aa18.41■□□□□ 0.54
USP11-212ENST00000497179 NLRP10Q86W26 655 aa18.4■□□□□ 0.54
USP11-212ENST00000497179 KIF13BQ9NQT8 1826 aa18.39■□□□□ 0.54
USP11-212ENST00000497179 F6X3S4 739 aa18.39■□□□□ 0.53
USP11-212ENST00000497179 ATP5J2-PTCD1G3V325 749 aa18.39■□□□□ 0.53
USP11-212ENST00000497179 NEXNQ0ZGT2 675 aa18.39■□□□□ 0.53
USP11-212ENST00000497179 NBPF5PQ86XG9 351 aaPredicted RBP18.39■□□□□ 0.53
USP11-212ENST00000497179 RCAN3Q9UKA8 241 aa18.39■□□□□ 0.53
USP11-212ENST00000497179 NOB1Q9ULX3 412 aaKnown RBP18.39■□□□□ 0.53
USP11-212ENST00000497179 N4BP2Q86UW6 1770 aaPredicted RBP18.39■□□□□ 0.53
USP11-212ENST00000497179 NTSR2O95665 410 aa18.38■□□□□ 0.53
USP11-212ENST00000497179 IGKV5-2P06315 115 aa18.38■□□□□ 0.53
USP11-212ENST00000497179 SUSD4Q5VX71 490 aa18.38■□□□□ 0.53
USP11-212ENST00000497179 PRR5LQ6MZQ0 368 aa18.38■□□□□ 0.53
USP11-212ENST00000497179 CNBD1Q8NA66 436 aa18.38■□□□□ 0.53
USP11-212ENST00000497179 ARHGAP45Q92619 1136 aa18.38■□□□□ 0.53
USP11-212ENST00000497179 NYXQ9GZU5 481 aa18.38■□□□□ 0.53
USP11-212ENST00000497179 PPP1R1BQ9UD71 204 aaPredicted RBP18.38■□□□□ 0.53
USP11-212ENST00000497179 RNF123Q5XPI4 1314 aa18.38■□□□□ 0.53
USP11-212ENST00000497179 PPP1R42Q7Z4L9 355 aa18.37■□□□□ 0.53
USP11-212ENST00000497179 CCDC191Q8NCU4 936 aa18.37■□□□□ 0.53
USP11-212ENST00000497179 LINS1Q8NG48 757 aa18.37■□□□□ 0.53
USP11-212ENST00000497179 API5Q9BZZ5 524 aaKnown RBP18.37■□□□□ 0.53
USP11-212ENST00000497179 FAM177BA6PVY3 158 aa18.36■□□□□ 0.53
USP11-212ENST00000497179 NEURL1BA8MQ27 555 aa18.36■□□□□ 0.53
USP11-212ENST00000497179 IPO8O15397 1037 aaKnown RBP18.36■□□□□ 0.53
USP11-212ENST00000497179 RIC1Q4ADV7 1423 aa18.36■□□□□ 0.53
USP11-212ENST00000497179 BEND3Q5T5X7 828 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms