RNA–Protein interactions for RNA: ENST00000496738.5

LMNA-216, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-216ENST00000496738 ZBTB3Q9H5J0 574 aa21.2■□□□□ 0.99
LMNA-216ENST00000496738 ARFGEF2Q9Y6D5 1785 aa21.2■□□□□ 0.98
LMNA-216ENST00000496738 HDAC1Q13547 482 aaPredicted RBP21.19■□□□□ 0.98
LMNA-216ENST00000496738 SBF2Q86WG5 1849 aa21.19■□□□□ 0.98
LMNA-216ENST00000496738 GNAI3P08754 354 aa21.18■□□□□ 0.98
LMNA-216ENST00000496738 NBPF7P0C2Y1 421 aaPredicted RBP21.18■□□□□ 0.98
LMNA-216ENST00000496738 PLBD2Q8NHP8 589 aa21.18■□□□□ 0.98
LMNA-216ENST00000496738 METTL22Q9BUU2 404 aaPredicted RBP21.18■□□□□ 0.98
LMNA-216ENST00000496738 IGKV5-2P06315 115 aa21.18■□□□□ 0.98
LMNA-216ENST00000496738 UBTFL1P0CB47 393 aaPredicted RBP21.18■□□□□ 0.98
LMNA-216ENST00000496738 LINS1Q8NG48 757 aa21.18■□□□□ 0.98
LMNA-216ENST00000496738 RGS17Q9UGC6 210 aaPredicted RBP21.18■□□□□ 0.98
LMNA-216ENST00000496738 GNAI2P04899 355 aa21.17■□□□□ 0.98
LMNA-216ENST00000496738 NEXNQ0ZGT2 675 aa21.17■□□□□ 0.98
LMNA-216ENST00000496738 CEP85Q6P2H3 762 aa21.17■□□□□ 0.98
LMNA-216ENST00000496738 LRRFIP2Q9Y608 721 aaKnown RBP21.17■□□□□ 0.98
LMNA-216ENST00000496738 ATP5J2-PTCD1G3V325 749 aa21.17■□□□□ 0.98
LMNA-216ENST00000496738 RXRBP28702 533 aa21.16■□□□□ 0.98
LMNA-216ENST00000496738 CRKLP46109 303 aaKnown RBP21.16■□□□□ 0.98
LMNA-216ENST00000496738 ALDH1L1O75891 902 aa21.16■□□□□ 0.98
LMNA-216ENST00000496738 C9orf78Q9NZ63 289 aaPredicted RBP21.16■□□□□ 0.98
LMNA-216ENST00000496738 NUP188Q5SRE5 1749 aa21.16■□□□□ 0.98
LMNA-216ENST00000496738 NEURL1BA8MQ27 555 aa21.15■□□□□ 0.98
LMNA-216ENST00000496738 INTS5Q6P9B9 1019 aaKnown RBP21.15■□□□□ 0.98
LMNA-216ENST00000496738 ANKRD44Q8N8A2 993 aa21.15■□□□□ 0.98
LMNA-216ENST00000496738 CCDC87Q9NVE4 849 aa21.15■□□□□ 0.98
LMNA-216ENST00000496738 RGS3P49796 1198 aa21.14■□□□□ 0.97
LMNA-216ENST00000496738 POTEAQ6S8J7 498 aa21.14■□□□□ 0.97
LMNA-216ENST00000496738 KIF6Q6ZMV9 814 aa21.14■□□□□ 0.97
LMNA-216ENST00000496738 FAM196AQ6ZSG2 479 aa21.14■□□□□ 0.97
LMNA-216ENST00000496738 LINC00116Q8NCU8 138 aa21.14■□□□□ 0.97
LMNA-216ENST00000496738 TRIM37O94972 964 aa21.13■□□□□ 0.97
LMNA-216ENST00000496738 JARID2Q92833 1246 aaPredicted RBP21.13■□□□□ 0.97
LMNA-216ENST00000496738 PDZRN3Q9UPQ7 1066 aa21.13■□□□□ 0.97
LMNA-216ENST00000496738 AFDNP55196 1824 aaKnown RBP21.13■□□□□ 0.97
LMNA-216ENST00000496738 CICQ96RK0 1608 aaPredicted RBP21.13■□□□□ 0.97
LMNA-216ENST00000496738 RPAP2Q8IXW5 612 aaPredicted RBP21.13■□□□□ 0.97
LMNA-216ENST00000496738 BCL11BQ9C0K0 894 aaPredicted RBP21.12■□□□□ 0.97
LMNA-216ENST00000496738 COL5A3P25940 1745 aaPredicted RBP21.12■□□□□ 0.97
LMNA-216ENST00000496738 CCNL1Q9UK58 526 aaPredicted RBP21.12■□□□□ 0.97
LMNA-216ENST00000496738 TBC1D2BQ9UPU7 963 aa21.12■□□□□ 0.97
LMNA-216ENST00000496738 GRM8O00222 908 aa21.11■□□□□ 0.97
LMNA-216ENST00000496738 GCKRQ14397 625 aa21.11■□□□□ 0.97
LMNA-216ENST00000496738 IL6STP40189 918 aaPredicted RBP21.1■□□□□ 0.97
LMNA-216ENST00000496738 NPM2Q86SE8 214 aaKnown RBP21.1■□□□□ 0.97
LMNA-216ENST00000496738 SMC5Q8IY18 1101 aa21.1■□□□□ 0.97
LMNA-216ENST00000496738 PNMA6EA0A0J9YXQ4 647 aa21.1■□□□□ 0.97
LMNA-216ENST00000496738 MYH14Q7Z406 1995 aaKnown RBP21.1■□□□□ 0.97
LMNA-216ENST00000496738 HLFQ16534 295 aa21.09■□□□□ 0.97
LMNA-216ENST00000496738 DZIP3Q86Y13 1208 aaKnown RBP21.09■□□□□ 0.97
LMNA-216ENST00000496738 EP400Q96L91 3159 aa21.09■□□□□ 0.97
LMNA-216ENST00000496738 MAP3K15Q6ZN16 1313 aa21.09■□□□□ 0.97
LMNA-216ENST00000496738 SMIM5Q71RC9 77 aa21.08■□□□□ 0.97
LMNA-216ENST00000496738 ZNF831Q5JPB2 1677 aa21.08■□□□□ 0.97
LMNA-216ENST00000496738 RREB1Q92766 1687 aa21.08■□□□□ 0.97
LMNA-216ENST00000496738 LY75O60449 1722 aa21.08■□□□□ 0.96
LMNA-216ENST00000496738 EIF5P55010 431 aaKnown RBP21.08■□□□□ 0.96
LMNA-216ENST00000496738 RTL5Q5HYW3 569 aaPredicted RBP21.08■□□□□ 0.96
LMNA-216ENST00000496738 SUCLG2Q96I99 432 aa21.08■□□□□ 0.96
LMNA-216ENST00000496738 APBB1O00213 710 aa21.07■□□□□ 0.96
LMNA-216ENST00000496738 A0A087WZG4 1122 aa21.07■□□□□ 0.96
LMNA-216ENST00000496738 ATP8B2P98198 1209 aa21.07■□□□□ 0.96
LMNA-216ENST00000496738 UBE3BQ7Z3V4 1068 aa21.07■□□□□ 0.96
LMNA-216ENST00000496738 GCC1Q96CN9 775 aa21.06■□□□□ 0.96
LMNA-216ENST00000496738 HMMRO75330 724 aa21.06■□□□□ 0.96
LMNA-216ENST00000496738 ANKRD45Q5TZF3 282 aa21.06■□□□□ 0.96
LMNA-216ENST00000496738 UTYO14607 1347 aa21.06■□□□□ 0.96
LMNA-216ENST00000496738 GPTP24298 496 aa21.05■□□□□ 0.96
LMNA-216ENST00000496738 TCIRG1Q13488 830 aa21.05■□□□□ 0.96
LMNA-216ENST00000496738 PPP1R42Q7Z4L9 355 aa21.05■□□□□ 0.96
LMNA-216ENST00000496738 GIGYF2Q6Y7W6 1299 aaKnown RBP21.05■□□□□ 0.96
LMNA-216ENST00000496738 KAZALD1Q96I82 304 aa21.05■□□□□ 0.96
LMNA-216ENST00000496738 LNPKQ9C0E8 428 aa21.05■□□□□ 0.96
LMNA-216ENST00000496738 DCTPP1Q9H773 170 aa21.05■□□□□ 0.96
LMNA-216ENST00000496738 CWC25Q9NXE8 425 aaPredicted RBP21.05■□□□□ 0.96
LMNA-216ENST00000496738 COL15A1P39059 1388 aa21.04■□□□□ 0.96
LMNA-216ENST00000496738 SRGAP3O43295 1099 aa21.04■□□□□ 0.96
LMNA-216ENST00000496738 NUCB1Q02818 461 aa21.04■□□□□ 0.96
LMNA-216ENST00000496738 BICC1Q9H694 974 aaKnown RBP21.04■□□□□ 0.96
LMNA-216ENST00000496738 EXOC6BQ9Y2D4 811 aa21.04■□□□□ 0.96
LMNA-216ENST00000496738 CNTNAP4Q9C0A0 1308 aa21.03■□□□□ 0.96
LMNA-216ENST00000496738 LRRC4BQ9NT99 713 aa21.03■□□□□ 0.96
LMNA-216ENST00000496738 ISCA1Q9BUE6 129 aa21.03■□□□□ 0.96
LMNA-216ENST00000496738 GNPATO15228 680 aa21.02■□□□□ 0.96
LMNA-216ENST00000496738 PDE4AP27815 886 aa21.02■□□□□ 0.96
LMNA-216ENST00000496738 EPHA10Q5JZY3 1008 aa21.02■□□□□ 0.96
LMNA-216ENST00000496738 CHD1LQ86WJ1 897 aa21.02■□□□□ 0.96
LMNA-216ENST00000496738 CCDC191Q8NCU4 936 aa21.02■□□□□ 0.95
LMNA-216ENST00000496738 TAF1LQ8IZX4 1826 aa21.01■□□□□ 0.95
LMNA-216ENST00000496738 NUP98P52948 1817 aa21■□□□□ 0.95
LMNA-216ENST00000496738 ERVV-1B6SEH8 477 aa21■□□□□ 0.95
LMNA-216ENST00000496738 SMARCA5O60264 1052 aaPredicted RBP21■□□□□ 0.95
LMNA-216ENST00000496738 SSH3Q8TE77 659 aa21■□□□□ 0.95
LMNA-216ENST00000496738 H7C1W4 665 aa20.99■□□□□ 0.95
LMNA-216ENST00000496738 CAMTA2O94983 1202 aa20.99■□□□□ 0.95
LMNA-216ENST00000496738 CASP7P55210 303 aa20.99■□□□□ 0.95
LMNA-216ENST00000496738 AMIGO3Q86WK7 504 aa20.99■□□□□ 0.95
LMNA-216ENST00000496738 HDAC5Q9UQL6 1122 aa20.99■□□□□ 0.95
LMNA-216ENST00000496738 IBTKQ9P2D0 1353 aaPredicted RBP20.99■□□□□ 0.95
LMNA-216ENST00000496738 ANKRD36CQ5JPF3 1778 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms