RNA–Protein interactions for RNA: ENST00000496427.5

CHCHD3-206, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5

Gene CHCHD3, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-206ENST00000496427 A0A0G2JLW4 131 aa9.65□□□□□ -0.86
CHCHD3-206ENST00000496427 ECM2O94769 699 aaPredicted RBP9.65□□□□□ -0.86
CHCHD3-206ENST00000496427 PHKG2P15735 406 aa9.65□□□□□ -0.86
CHCHD3-206ENST00000496427 NKX1-1Q15270 411 aaPredicted RBP9.65□□□□□ -0.86
CHCHD3-206ENST00000496427 SLC4A9Q96Q91 983 aa9.65□□□□□ -0.86
CHCHD3-206ENST00000496427 NMRK2Q9NPI5 230 aa9.65□□□□□ -0.86
CHCHD3-206ENST00000496427 RTN4Q9NQC3 1192 aaKnown RBP9.65□□□□□ -0.86
CHCHD3-206ENST00000496427 ATG3Q9NT62 314 aa9.65□□□□□ -0.86
CHCHD3-206ENST00000496427 SPG7Q9UQ90 795 aa9.65□□□□□ -0.86
CHCHD3-206ENST00000496427 TK2O00142 265 aa9.64□□□□□ -0.87
CHCHD3-206ENST00000496427 HTRA3P83110 453 aa9.64□□□□□ -0.87
CHCHD3-206ENST00000496427 ADGRD1Q6QNK2 874 aa9.64□□□□□ -0.87
CHCHD3-206ENST00000496427 KCPQ6ZWJ8 1503 aa9.64□□□□□ -0.87
CHCHD3-206ENST00000496427 KDM6AO15550 1401 aaPredicted RBP9.64□□□□□ -0.87
CHCHD3-206ENST00000496427 DPEP1P16444 411 aa9.63□□□□□ -0.87
CHCHD3-206ENST00000496427 ARHGAP27Q6ZUM4 889 aa9.63□□□□□ -0.87
CHCHD3-206ENST00000496427 IFNL2Q8IZJ0 200 aa9.63□□□□□ -0.87
CHCHD3-206ENST00000496427 DICER1Q9UPY3 1922 aaKnown RBP9.62□□□□□ -0.87
CHCHD3-206ENST00000496427 NRXN2Q9P2S2 1712 aa9.62□□□□□ -0.87
CHCHD3-206ENST00000496427 WASHC2AQ641Q2 1341 aa9.62□□□□□ -0.87
CHCHD3-206ENST00000496427 ANKRD31Q8N7Z5 1873 aa9.62□□□□□ -0.87
CHCHD3-206ENST00000496427 FCHSD2O94868 740 aa9.62□□□□□ -0.87
CHCHD3-206ENST00000496427 TNNT2P45379 298 aaPredicted RBP9.62□□□□□ -0.87
CHCHD3-206ENST00000496427 APLP1P51693 650 aa9.62□□□□□ -0.87
CHCHD3-206ENST00000496427 RTCBQ9Y3I0 505 aaKnown RBP9.62□□□□□ -0.87
CHCHD3-206ENST00000496427 COL11A2P13942 1736 aaPredicted RBP9.62□□□□□ -0.87
CHCHD3-206ENST00000496427 GYS1P13807 737 aa9.61□□□□□ -0.87
CHCHD3-206ENST00000496427 HMGB2P26583 209 aaKnown RBP9.61□□□□□ -0.87
CHCHD3-206ENST00000496427 EIF4A2Q14240 407 aaKnown RBP9.61□□□□□ -0.87
CHCHD3-206ENST00000496427 PTCD2Q8WV60 388 aaKnown RBP9.61□□□□□ -0.87
CHCHD3-206ENST00000496427 ARHGEF1Q92888 912 aaKnown RBP9.61□□□□□ -0.87
CHCHD3-206ENST00000496427 CCDC87Q9NVE4 849 aa9.61□□□□□ -0.87
CHCHD3-206ENST00000496427 POLKQ9UBT6 870 aa9.61□□□□□ -0.87
CHCHD3-206ENST00000496427 TOMM70O94826 608 aa9.6□□□□□ -0.87
CHCHD3-206ENST00000496427 TGFB2P61812 414 aa9.6□□□□□ -0.87
CHCHD3-206ENST00000496427 TRAPPC3LQ5T215 181 aa9.6□□□□□ -0.87
CHCHD3-206ENST00000496427 C9orf131Q5VYM1 1079 aa9.6□□□□□ -0.87
CHCHD3-206ENST00000496427 DNAJC5GQ8N7S2 189 aa9.6□□□□□ -0.87
CHCHD3-206ENST00000496427 POLR3GLQ9BT43 218 aa9.6□□□□□ -0.87
CHCHD3-206ENST00000496427 SRP68Q9UHB9 627 aaKnown RBP9.6□□□□□ -0.87
CHCHD3-206ENST00000496427 UBR2Q8IWV8 1755 aa9.6□□□□□ -0.87
CHCHD3-206ENST00000496427 CNTNAP4Q9C0A0 1308 aa9.59□□□□□ -0.87
CHCHD3-206ENST00000496427 KCNA3P22001 575 aa9.59□□□□□ -0.87
CHCHD3-206ENST00000496427 PARP3Q9Y6F1 533 aa9.59□□□□□ -0.87
CHCHD3-206ENST00000496427 PLEKHG2Q9H7P9 1386 aa9.59□□□□□ -0.87
CHCHD3-206ENST00000496427 FER1L6Q2WGJ9 1857 aa9.58□□□□□ -0.88
CHCHD3-206ENST00000496427 RPS6KA4O75676 772 aa9.58□□□□□ -0.88
CHCHD3-206ENST00000496427 CHRNA5P30532 468 aa9.58□□□□□ -0.88
CHCHD3-206ENST00000496427 RFC4P35249 363 aa9.58□□□□□ -0.88
CHCHD3-206ENST00000496427 DDR1Q08345 913 aa9.58□□□□□ -0.88
CHCHD3-206ENST00000496427 CDCA8Q53HL2 280 aa9.58□□□□□ -0.88
CHCHD3-206ENST00000496427 NLGN1Q8N2Q7 840 aa9.58□□□□□ -0.88
CHCHD3-206ENST00000496427 RNF181Q9P0P0 153 aa9.58□□□□□ -0.88
CHCHD3-206ENST00000496427 SCN7AQ01118 1682 aa9.58□□□□□ -0.88
CHCHD3-206ENST00000496427 PCNTO95613 3336 aa9.57□□□□□ -0.88
CHCHD3-206ENST00000496427 PTCD1O75127 700 aaKnown RBP9.57□□□□□ -0.88
CHCHD3-206ENST00000496427 CRKLP46109 303 aaKnown RBP9.57□□□□□ -0.88
CHCHD3-206ENST00000496427 RASSF7Q02833 373 aa9.57□□□□□ -0.88
CHCHD3-206ENST00000496427 RC3H1Q5TC82 1133 aaKnown RBP9.57□□□□□ -0.88
CHCHD3-206ENST00000496427 ZNF530Q6P9A1 599 aaPredicted RBP9.57□□□□□ -0.88
CHCHD3-206ENST00000496427 AEBP1Q8IUX7 1158 aa9.57□□□□□ -0.88
CHCHD3-206ENST00000496427 SIPA1L3O60292 1781 aaPredicted RBP9.57□□□□□ -0.88
CHCHD3-206ENST00000496427 ARFGEF2Q9Y6D5 1785 aa9.57□□□□□ -0.88
CHCHD3-206ENST00000496427 ERVV-2B6SEH9 535 aa9.56□□□□□ -0.88
CHCHD3-206ENST00000496427 HRO43593 1189 aa9.56□□□□□ -0.88
CHCHD3-206ENST00000496427 TBC1D12O60347 775 aa9.56□□□□□ -0.88
CHCHD3-206ENST00000496427 CABP4P57796 275 aa9.56□□□□□ -0.88
CHCHD3-206ENST00000496427 FOXK1P85037 733 aa9.56□□□□□ -0.88
CHCHD3-206ENST00000496427 PPP4R3BQ5MIZ7 849 aa9.56□□□□□ -0.88
CHCHD3-206ENST00000496427 COL13A1Q5TAT6 717 aaPredicted RBP9.56□□□□□ -0.88
CHCHD3-206ENST00000496427 C16orf71Q8IYS4 520 aaPredicted RBP9.56□□□□□ -0.88
CHCHD3-206ENST00000496427 RBM46Q8TBY0 533 aaKnown RBP9.56□□□□□ -0.88
CHCHD3-206ENST00000496427 KLRG1Q96E93 195 aa9.56□□□□□ -0.88
CHCHD3-206ENST00000496427 DCAF5Q96JK2 942 aa9.56□□□□□ -0.88
CHCHD3-206ENST00000496427 RRAGCQ9HB90 399 aa9.56□□□□□ -0.88
CHCHD3-206ENST00000496427 USP42Q9H9J4 1324 aaKnown RBP9.56□□□□□ -0.88
CHCHD3-206ENST00000496427 BCORQ6W2J9 1755 aa9.55□□□□□ -0.88
CHCHD3-206ENST00000496427 PIM2Q9P1W9 311 aa9.55□□□□□ -0.88
CHCHD3-206ENST00000496427 MRC1P22897 1456 aa9.54□□□□□ -0.88
CHCHD3-206ENST00000496427 HSP90AB1P08238 724 aaKnown RBP9.54□□□□□ -0.88
CHCHD3-206ENST00000496427 PLEKHO1Q53GL0 409 aaPredicted RBP9.54□□□□□ -0.88
CHCHD3-206ENST00000496427 DALRD3Q5D0E6 543 aaKnown RBP9.54□□□□□ -0.88
CHCHD3-206ENST00000496427 CARMIL3Q8ND23 1372 aa9.53□□□□□ -0.88
CHCHD3-206ENST00000496427 POLRMTO00411 1230 aaKnown RBP9.53□□□□□ -0.88
CHCHD3-206ENST00000496427 RGL2O15211 777 aa9.53□□□□□ -0.88
CHCHD3-206ENST00000496427 MTHFSP49914 203 aa9.53□□□□□ -0.88
CHCHD3-206ENST00000496427 PRELPP51888 382 aa9.53□□□□□ -0.88
CHCHD3-206ENST00000496427 USPL1Q5W0Q7 1092 aa9.53□□□□□ -0.88
CHCHD3-206ENST00000496427 NFATC2IPQ8NCF5 419 aa9.53□□□□□ -0.88
CHCHD3-206ENST00000496427 SLX4Q8IY92 1834 aa9.53□□□□□ -0.88
CHCHD3-206ENST00000496427 KDM2BQ8NHM5 1336 aa9.53□□□□□ -0.88
CHCHD3-206ENST00000496427 PPP1R37O75864 691 aa9.52□□□□□ -0.89
CHCHD3-206ENST00000496427 FSTL1Q12841 308 aa9.52□□□□□ -0.89
CHCHD3-206ENST00000496427 C1orf141Q5JVX7 400 aa9.52□□□□□ -0.89
CHCHD3-206ENST00000496427 INTS5Q6P9B9 1019 aaKnown RBP9.52□□□□□ -0.89
CHCHD3-206ENST00000496427 DNAJC10Q8IXB1 793 aa9.52□□□□□ -0.89
CHCHD3-206ENST00000496427 JMYQ8N9B5 988 aa9.52□□□□□ -0.89
CHCHD3-206ENST00000496427 GPHNQ9NQX3 736 aaPredicted RBP9.52□□□□□ -0.89
CHCHD3-206ENST00000496427 COL15A1P39059 1388 aa9.51□□□□□ -0.89
CHCHD3-206ENST00000496427 TM4SF1P30408 202 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms