RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-205ENST00000496323 C8orf37Q96NL8 207 aa16.95■□□□□ 0.3
SPTBN1-205ENST00000496323 SLC4A9Q96Q91 983 aa16.95■□□□□ 0.3
SPTBN1-205ENST00000496323 CCDC9Q9Y3X0 531 aaKnown RBP16.95■□□□□ 0.3
SPTBN1-205ENST00000496323 SALL3Q9BXA9 1300 aa16.94■□□□□ 0.3
SPTBN1-205ENST00000496323 SYTL4Q96C24 671 aaPredicted RBP16.94■□□□□ 0.3
SPTBN1-205ENST00000496323 SURF6O75683 361 aaKnown RBP16.94■□□□□ 0.3
SPTBN1-205ENST00000496323 WNK3Q9BYP7 1800 aa16.94■□□□□ 0.3
SPTBN1-205ENST00000496323 NWD2Q9ULI1 1742 aa16.93■□□□□ 0.3
SPTBN1-205ENST00000496323 NGLY1Q96IV0 654 aa16.93■□□□□ 0.3
SPTBN1-205ENST00000496323 RBM42Q9BTD8 480 aaKnown RBP16.93■□□□□ 0.3
SPTBN1-205ENST00000496323 ATP5J2-PTCD1G3V325 749 aa16.93■□□□□ 0.3
SPTBN1-205ENST00000496323 TBC1D32Q96NH3 1257 aa16.93■□□□□ 0.3
SPTBN1-205ENST00000496323 TEX13AQ9BXU3 409 aaPredicted RBP16.93■□□□□ 0.3
SPTBN1-205ENST00000496323 OSBPL3Q9H4L5 887 aa16.93■□□□□ 0.3
SPTBN1-205ENST00000496323 BICC1Q9H694 974 aaKnown RBP16.93■□□□□ 0.3
SPTBN1-205ENST00000496323 HDAC5Q9UQL6 1122 aa16.93■□□□□ 0.3
SPTBN1-205ENST00000496323 PDE1AP54750 535 aa16.92■□□□□ 0.3
SPTBN1-205ENST00000496323 FNBP4Q8N3X1 1017 aaPredicted RBP16.92■□□□□ 0.3
SPTBN1-205ENST00000496323 NOP58Q9Y2X3 529 aaKnown RBP16.92■□□□□ 0.3
SPTBN1-205ENST00000496323 RAB11FIP3O75154 756 aa16.92■□□□□ 0.3
SPTBN1-205ENST00000496323 VPS72Q15906 364 aa16.92■□□□□ 0.3
SPTBN1-205ENST00000496323 AEBP2Q6ZN18 517 aaPredicted RBP16.92■□□□□ 0.3
SPTBN1-205ENST00000496323 MFAP1P55081 439 aaKnown RBP16.91■□□□□ 0.3
SPTBN1-205ENST00000496323 EPHA10Q5JZY3 1008 aa16.91■□□□□ 0.3
SPTBN1-205ENST00000496323 TBC1D9Q6ZT07 1266 aa16.91■□□□□ 0.3
SPTBN1-205ENST00000496323 RHPN1Q8TCX5 695 aa16.9■□□□□ 0.3
SPTBN1-205ENST00000496323 JARID2Q92833 1246 aaPredicted RBP16.9■□□□□ 0.3
SPTBN1-205ENST00000496323 DDRGK1Q96HY6 314 aa16.9■□□□□ 0.3
SPTBN1-205ENST00000496323 UPF2Q9HAU5 1272 aaKnown RBP16.9■□□□□ 0.3
SPTBN1-205ENST00000496323 IL1RAPL2Q9NP60 686 aa16.9■□□□□ 0.3
SPTBN1-205ENST00000496323 SPATA31A6Q5VVP1 1343 aa16.9■□□□□ 0.3
SPTBN1-205ENST00000496323 STARD3NLO95772 234 aa16.9■□□□□ 0.3
SPTBN1-205ENST00000496323 FAM98CQ17RN3 349 aaKnown RBP16.9■□□□□ 0.3
SPTBN1-205ENST00000496323 TSHZ3Q63HK5 1081 aa16.9■□□□□ 0.3
SPTBN1-205ENST00000496323 ZBTB3Q9H5J0 574 aa16.9■□□□□ 0.3
SPTBN1-205ENST00000496323 SDSP20132 328 aa16.89■□□□□ 0.29
SPTBN1-205ENST00000496323 CASP7P55210 303 aa16.89■□□□□ 0.29
SPTBN1-205ENST00000496323 ACSBG1Q96GR2 724 aa16.89■□□□□ 0.29
SPTBN1-205ENST00000496323 ITGB4P16144 1822 aa16.89■□□□□ 0.29
SPTBN1-205ENST00000496323 CYP19A1P11511 503 aaPredicted RBP16.89■□□□□ 0.29
SPTBN1-205ENST00000496323 PA2G4Q9UQ80 394 aaKnown RBP16.89■□□□□ 0.29
SPTBN1-205ENST00000496323 A0A087WZG4 1122 aa16.88■□□□□ 0.29
SPTBN1-205ENST00000496323 CDC45O75419 566 aa16.88■□□□□ 0.29
SPTBN1-205ENST00000496323 MX1P20591 662 aa16.88■□□□□ 0.29
SPTBN1-205ENST00000496323 UBE3BQ7Z3V4 1068 aa16.88■□□□□ 0.29
SPTBN1-205ENST00000496323 KIF1BPQ96EK5 621 aa16.88■□□□□ 0.29
SPTBN1-205ENST00000496323 STAP2Q9UGK3 403 aa16.88■□□□□ 0.29
SPTBN1-205ENST00000496323 COL15A1P39059 1388 aa16.87■□□□□ 0.29
SPTBN1-205ENST00000496323 HSP90AB4PQ58FF6 505 aa16.87■□□□□ 0.29
SPTBN1-205ENST00000496323 C22orf23Q9BZE7 217 aa16.87■□□□□ 0.29
SPTBN1-205ENST00000496323 ARFGEF2Q9Y6D5 1785 aa16.87■□□□□ 0.29
SPTBN1-205ENST00000496323 H7C1W4 665 aa16.86■□□□□ 0.29
SPTBN1-205ENST00000496323 HSPA1LP34931 641 aa16.86■□□□□ 0.29
SPTBN1-205ENST00000496323 RABL6Q3YEC7 729 aaPredicted RBP16.86■□□□□ 0.29
SPTBN1-205ENST00000496323 NUTM1Q86Y26 1132 aa16.86■□□□□ 0.29
SPTBN1-205ENST00000496323 USP21Q9UK80 565 aa16.86■□□□□ 0.29
SPTBN1-205ENST00000496323 ZNF330Q9Y3S2 320 aaPredicted RBP16.86■□□□□ 0.29
SPTBN1-205ENST00000496323 DOT1LQ8TEK3 1739 aa16.86■□□□□ 0.29
SPTBN1-205ENST00000496323 CWC25Q9NXE8 425 aaPredicted RBP16.85■□□□□ 0.29
SPTBN1-205ENST00000496323 ZBTB1Q9Y2K1 713 aa16.85■□□□□ 0.29
SPTBN1-205ENST00000496323 A0A0G2JS52 829 aa16.84■□□□□ 0.29
SPTBN1-205ENST00000496323 KCNQ2O43526 872 aa16.84■□□□□ 0.29
SPTBN1-205ENST00000496323 SLC4A3P48751 1232 aa16.84■□□□□ 0.29
SPTBN1-205ENST00000496323 CCDC191Q8NCU4 936 aa16.84■□□□□ 0.29
SPTBN1-205ENST00000496323 ISCA1Q9BUE6 129 aa16.84■□□□□ 0.29
SPTBN1-205ENST00000496323 NUP188Q5SRE5 1749 aa16.84■□□□□ 0.29
SPTBN1-205ENST00000496323 OS9Q13438 667 aaPredicted RBP16.84■□□□□ 0.29
SPTBN1-205ENST00000496323 TCIRG1Q13488 830 aa16.84■□□□□ 0.29
SPTBN1-205ENST00000496323 KLHDC4Q8TBB5 520 aa16.84■□□□□ 0.29
SPTBN1-205ENST00000496323 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.84■□□□□ 0.29
SPTBN1-205ENST00000496323 RFX5P48382 616 aaPredicted RBP16.83■□□□□ 0.28
SPTBN1-205ENST00000496323 SASH1O94885 1247 aa16.82■□□□□ 0.28
SPTBN1-205ENST00000496323 FOXO4P98177 505 aa16.82■□□□□ 0.28
SPTBN1-205ENST00000496323 KIF6Q6ZMV9 814 aa16.82■□□□□ 0.28
SPTBN1-205ENST00000496323 AOX1Q06278 1338 aa16.82■□□□□ 0.28
SPTBN1-205ENST00000496323 RBM25P49756 843 aaKnown RBP16.82■□□□□ 0.28
SPTBN1-205ENST00000496323 ERC1Q8IUD2 1116 aa16.82■□□□□ 0.28
SPTBN1-205ENST00000496323 MAP3K15Q6ZN16 1313 aa16.82■□□□□ 0.28
SPTBN1-205ENST00000496323 LOC102724428A0A0B4J2F2 783 aa16.81■□□□□ 0.28
SPTBN1-205ENST00000496323 SIK1P57059 783 aa16.81■□□□□ 0.28
SPTBN1-205ENST00000496323 TRIM28Q13263 835 aaKnown RBP16.81■□□□□ 0.28
SPTBN1-205ENST00000496323 HLFQ16534 295 aa16.81■□□□□ 0.28
SPTBN1-205ENST00000496323 RTL5Q5HYW3 569 aaPredicted RBP16.81■□□□□ 0.28
SPTBN1-205ENST00000496323 PI4K2BQ8TCG2 481 aa16.81■□□□□ 0.28
SPTBN1-205ENST00000496323 ERICH6Q7L0X2 663 aa16.81■□□□□ 0.28
SPTBN1-205ENST00000496323 COPRSQ9NQ92 184 aa16.81■□□□□ 0.28
SPTBN1-205ENST00000496323 PTPN12Q05209 780 aaKnown RBP16.8■□□□□ 0.28
SPTBN1-205ENST00000496323 G3BP1Q13283 466 aaKnown RBP eCLIP16.8■□□□□ 0.282e-12■■□□□ 14.3
SPTBN1-205ENST00000496323 ITPK1Q13572 414 aa16.8■□□□□ 0.28
SPTBN1-205ENST00000496323 INTS5Q6P9B9 1019 aaKnown RBP16.8■□□□□ 0.28
SPTBN1-205ENST00000496323 LMBR1LQ6UX01 489 aa16.8■□□□□ 0.28
SPTBN1-205ENST00000496323 SIL1Q9H173 461 aa16.8■□□□□ 0.28
SPTBN1-205ENST00000496323 TJP1Q07157 1748 aa16.8■□□□□ 0.28
SPTBN1-205ENST00000496323 PALLDQ8WX93 1383 aa16.8■□□□□ 0.28
SPTBN1-205ENST00000496323 USP42Q9H9J4 1324 aaKnown RBP16.8■□□□□ 0.28
SPTBN1-205ENST00000496323 ATP6V1AP38606 617 aa16.8■□□□□ 0.28
SPTBN1-205ENST00000496323 IL6STP40189 918 aaPredicted RBP16.8■□□□□ 0.28
SPTBN1-205ENST00000496323 GIGYF2Q6Y7W6 1299 aaKnown RBP16.8■□□□□ 0.28
SPTBN1-205ENST00000496323 CLASRPQ8N2M8 674 aaKnown RBP16.8■□□□□ 0.28
SPTBN1-205ENST00000496323 ARXQ96QS3 562 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms