RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 HOXB7P09629 217 aa22.94■■□□□ 1.26
HDAC4-211ENST00000494800 CHRNA5P30532 468 aa22.94■■□□□ 1.26
HDAC4-211ENST00000494800 PDE6BP35913 854 aa22.94■■□□□ 1.26
HDAC4-211ENST00000494800 NBPF5PQ86XG9 351 aaPredicted RBP22.94■■□□□ 1.26
HDAC4-211ENST00000494800 NIP7Q9Y221 180 aaKnown RBP eCLIP22.94■■□□□ 1.26
HDAC4-211ENST00000494800 H0YIN7 160 aa22.93■■□□□ 1.26
HDAC4-211ENST00000494800 KCNA3P22001 575 aa22.93■■□□□ 1.26
HDAC4-211ENST00000494800 PRR5LQ6MZQ0 368 aa22.93■■□□□ 1.26
HDAC4-211ENST00000494800 BRIP1Q9BX63 1249 aa22.93■■□□□ 1.26
HDAC4-211ENST00000494800 AFDNP55196 1824 aaKnown RBP22.92■■□□□ 1.26
HDAC4-211ENST00000494800 MAP3K15Q6ZN16 1313 aa22.92■■□□□ 1.26
HDAC4-211ENST00000494800 C2CD5Q86YS7 1000 aa22.92■■□□□ 1.26
HDAC4-211ENST00000494800 MBIPQ9NS73 344 aa22.92■■□□□ 1.26
HDAC4-211ENST00000494800 CCDC27Q2M243 656 aa22.91■■□□□ 1.26
HDAC4-211ENST00000494800 TPTE2Q6XPS3 522 aa22.91■■□□□ 1.26
HDAC4-211ENST00000494800 ZNF853P0CG23 659 aa22.9■■□□□ 1.26
HDAC4-211ENST00000494800 HLFQ16534 295 aa22.9■■□□□ 1.26
HDAC4-211ENST00000494800 HDGFL1Q5TGJ6 251 aa22.9■■□□□ 1.26
HDAC4-211ENST00000494800 NECTIN2Q92692 538 aa22.9■■□□□ 1.26
HDAC4-211ENST00000494800 GTF2E1P29083 439 aaPredicted RBP22.89■■□□□ 1.25
HDAC4-211ENST00000494800 NCBP3Q53F19 620 aaKnown RBP22.89■■□□□ 1.25
HDAC4-211ENST00000494800 TTLL7Q6ZT98 887 aa22.89■■□□□ 1.25
HDAC4-211ENST00000494800 ARHGAP27Q6ZUM4 889 aa22.89■■□□□ 1.25
HDAC4-211ENST00000494800 CHMP4AQ9BY43 222 aa22.89■■□□□ 1.25
HDAC4-211ENST00000494800 ZBTB3Q9H5J0 574 aa22.89■■□□□ 1.25
HDAC4-211ENST00000494800 KRT24Q2M2I5 525 aa22.88■■□□□ 1.25
HDAC4-211ENST00000494800 ZNF784Q8NCA9 323 aaPredicted RBP22.88■■□□□ 1.25
HDAC4-211ENST00000494800 NYXQ9GZU5 481 aa22.88■■□□□ 1.25
HDAC4-211ENST00000494800 DDX21Q9NR30 783 aaKnown RBP eCLIP22.88■■□□□ 1.25
HDAC4-211ENST00000494800 PDIA6Q15084 440 aa22.87■■□□□ 1.25
HDAC4-211ENST00000494800 DUSP27Q5VZP5 1158 aa22.87■■□□□ 1.25
HDAC4-211ENST00000494800 TTLL6Q8N841 843 aa22.87■■□□□ 1.25
HDAC4-211ENST00000494800 DBF4Q9UBU7 674 aaPredicted RBP22.87■■□□□ 1.25
HDAC4-211ENST00000494800 ATP10DQ9P241 1426 aa22.86■■□□□ 1.25
HDAC4-211ENST00000494800 FAM9BQ8IZU0 186 aa22.86■■□□□ 1.25
HDAC4-211ENST00000494800 CCDC24Q8N4L8 307 aa22.86■■□□□ 1.25
HDAC4-211ENST00000494800 FAM177BA6PVY3 158 aa22.85■■□□□ 1.25
HDAC4-211ENST00000494800 GIGYF2Q6Y7W6 1299 aaKnown RBP22.85■■□□□ 1.25
HDAC4-211ENST00000494800 WWC1Q8IX03 1113 aa22.85■■□□□ 1.25
HDAC4-211ENST00000494800 ZNF622Q969S3 477 aaKnown RBP eCLIP22.85■■□□□ 1.25
HDAC4-211ENST00000494800 BRCA1P38398 1863 aaKnown RBP22.85■■□□□ 1.25
HDAC4-211ENST00000494800 ANXA1P04083 346 aa22.84■■□□□ 1.25
HDAC4-211ENST00000494800 AIMP1Q12904 312 aaKnown RBP22.84■■□□□ 1.25
HDAC4-211ENST00000494800 PROSER3Q2NL68 480 aa22.84■■□□□ 1.25
HDAC4-211ENST00000494800 COPS6Q7L5N1 327 aa22.84■■□□□ 1.25
HDAC4-211ENST00000494800 CHPF2Q9P2E5 772 aa22.84■■□□□ 1.25
HDAC4-211ENST00000494800 HSP90AB3PQ58FF7 597 aa22.83■■□□□ 1.25
HDAC4-211ENST00000494800 LRP10Q7Z4F1 713 aa22.83■■□□□ 1.25
HDAC4-211ENST00000494800 XAGE3Q8WTP9 111 aa22.83■■□□□ 1.25
HDAC4-211ENST00000494800 GPTP24298 496 aa22.82■■□□□ 1.24
HDAC4-211ENST00000494800 PARP10Q53GL7 1025 aa22.82■■□□□ 1.24
HDAC4-211ENST00000494800 CNKSR1Q969H4 720 aa22.82■■□□□ 1.24
HDAC4-211ENST00000494800 HYPKQ9NX55 129 aa22.82■■□□□ 1.24
HDAC4-211ENST00000494800 IL16Q14005 1332 aa22.82■■□□□ 1.24
HDAC4-211ENST00000494800 IBTKQ9P2D0 1353 aaPredicted RBP22.81■■□□□ 1.24
HDAC4-211ENST00000494800 ARFGEF1Q9Y6D6 1849 aa22.81■■□□□ 1.24
HDAC4-211ENST00000494800 SENP3-EIF4A1A0A087X0R7 540 aa22.81■■□□□ 1.24
HDAC4-211ENST00000494800 STYK1Q6J9G0 422 aa22.81■■□□□ 1.24
HDAC4-211ENST00000494800 PPP1R42Q7Z4L9 355 aa22.81■■□□□ 1.24
HDAC4-211ENST00000494800 MASTLQ96GX5 879 aa22.81■■□□□ 1.24
HDAC4-211ENST00000494800 ELL2O00472 640 aaPredicted RBP22.8■■□□□ 1.24
HDAC4-211ENST00000494800 ZNF34Q8IZ26 560 aa22.8■■□□□ 1.24
HDAC4-211ENST00000494800 DLEC1Q9Y238 1755 aa22.8■■□□□ 1.24
HDAC4-211ENST00000494800 SRGNP10124 158 aa22.79■■□□□ 1.24
HDAC4-211ENST00000494800 SALL2Q9Y467 1007 aaPredicted RBP22.79■■□□□ 1.24
HDAC4-211ENST00000494800 NPR1P16066 1061 aa22.78■■□□□ 1.24
HDAC4-211ENST00000494800 WDR63Q8IWG1 891 aa22.78■■□□□ 1.24
HDAC4-211ENST00000494800 ANKRD31Q8N7Z5 1873 aa22.78■■□□□ 1.24
HDAC4-211ENST00000494800 UBN2Q6ZU65 1347 aa22.78■■□□□ 1.24
HDAC4-211ENST00000494800 NUP98P52948 1817 aa22.78■■□□□ 1.24
HDAC4-211ENST00000494800 CCDC30Q5VVM6 783 aa22.77■■□□□ 1.24
HDAC4-211ENST00000494800 C8orf58Q8NAV2 365 aa22.77■■□□□ 1.24
HDAC4-211ENST00000494800 TSR2Q969E8 191 aaKnown RBP22.77■■□□□ 1.24
HDAC4-211ENST00000494800 ADCY9O60503 1353 aa22.76■■□□□ 1.23
HDAC4-211ENST00000494800 KLRG2A4D1S0 409 aaPredicted RBP22.76■■□□□ 1.23
HDAC4-211ENST00000494800 SOGA3Q5TF21 947 aa22.76■■□□□ 1.23
HDAC4-211ENST00000494800 SUSD4Q5VX71 490 aa22.76■■□□□ 1.23
HDAC4-211ENST00000494800 ANKRD13DQ6ZTN6 518 aa22.76■■□□□ 1.23
HDAC4-211ENST00000494800 NUTM1Q86Y26 1132 aa22.76■■□□□ 1.23
HDAC4-211ENST00000494800 PLBD2Q8NHP8 589 aa22.76■■□□□ 1.23
HDAC4-211ENST00000494800 GOLGA2Q08379 1002 aa22.75■■□□□ 1.23
HDAC4-211ENST00000494800 ERFEQ4G0M1 354 aa22.75■■□□□ 1.23
HDAC4-211ENST00000494800 UTP14AQ9BVJ6 771 aaKnown RBP22.75■■□□□ 1.23
HDAC4-211ENST00000494800 GPBP1L1Q9HC44 474 aaPredicted RBP22.75■■□□□ 1.23
HDAC4-211ENST00000494800 RNF123Q5XPI4 1314 aa22.75■■□□□ 1.23
HDAC4-211ENST00000494800 ALDH1B1P30837 517 aa22.74■■□□□ 1.23
HDAC4-211ENST00000494800 TCIRG1Q13488 830 aa22.74■■□□□ 1.23
HDAC4-211ENST00000494800 C9orf131Q5VYM1 1079 aa22.74■■□□□ 1.23
HDAC4-211ENST00000494800 PRPF40BQ6NWY9 871 aaKnown RBP22.74■■□□□ 1.23
HDAC4-211ENST00000494800 COL11A2P13942 1736 aaPredicted RBP22.74■■□□□ 1.23
HDAC4-211ENST00000494800 C21orf2O43822 256 aa22.73■■□□□ 1.23
HDAC4-211ENST00000494800 NTSR2O95665 410 aa22.73■■□□□ 1.23
HDAC4-211ENST00000494800 RPGRQ92834 1020 aaKnown RBP22.73■■□□□ 1.23
HDAC4-211ENST00000494800 STK31Q9BXU1 1019 aa22.73■■□□□ 1.23
HDAC4-211ENST00000494800 ZNF219Q9P2Y4 722 aaPredicted RBP22.73■■□□□ 1.23
HDAC4-211ENST00000494800 RIC1Q4ADV7 1423 aa22.73■■□□□ 1.23
HDAC4-211ENST00000494800 DDX58O95786 925 aaKnown RBP22.72■■□□□ 1.23
HDAC4-211ENST00000494800 TWISTNBQ3B726 338 aaPredicted RBP22.72■■□□□ 1.23
HDAC4-211ENST00000494800 RNF181Q9P0P0 153 aa22.72■■□□□ 1.23
HDAC4-211ENST00000494800 ABCC12Q96J65 1359 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms