RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 GSDMDP57764 484 aa5.67□□□□□ -1.5
PRKD3-210ENST00000494667 TPD52L1Q16890 204 aaPredicted RBP5.67□□□□□ -1.5
PRKD3-210ENST00000494667 HSP90AB3PQ58FF7 597 aa5.67□□□□□ -1.5
PRKD3-210ENST00000494667 SAMD1Q6SPF0 538 aaPredicted RBP5.67□□□□□ -1.5
PRKD3-210ENST00000494667 MMS22LQ6ZRQ5 1243 aa5.67□□□□□ -1.5
PRKD3-210ENST00000494667 HNRNPLLQ8WVV9 542 aaKnown RBP5.67□□□□□ -1.5
PRKD3-210ENST00000494667 SMARCE1Q969G3 411 aa5.67□□□□□ -1.5
PRKD3-210ENST00000494667 ST7Q9NRC1 585 aa5.67□□□□□ -1.5
PRKD3-210ENST00000494667 NRKQ7Z2Y5 1582 aa5.67□□□□□ -1.5
PRKD3-210ENST00000494667 EFCAB8A8MWE9 144 aa5.67□□□□□ -1.5
PRKD3-210ENST00000494667 TBC1D8O95759 1140 aa5.67□□□□□ -1.5
PRKD3-210ENST00000494667 JAKMIP3Q5VZ66 844 aa5.67□□□□□ -1.5
PRKD3-210ENST00000494667 AEBP1Q8IUX7 1158 aa5.67□□□□□ -1.5
PRKD3-210ENST00000494667 CCDC191Q8NCU4 936 aa5.67□□□□□ -1.5
PRKD3-210ENST00000494667 DDX19AQ9NUU7 478 aaKnown RBP5.67□□□□□ -1.5
PRKD3-210ENST00000494667 LCMT1Q9UIC8 334 aa5.67□□□□□ -1.5
PRKD3-210ENST00000494667 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.67□□□□□ -1.5
PRKD3-210ENST00000494667 CD163L1Q9NR16 1453 aa5.66□□□□□ -1.5
PRKD3-210ENST00000494667 TADA3O75528 432 aa5.66□□□□□ -1.5
PRKD3-210ENST00000494667 TYRO3Q06418 890 aa5.66□□□□□ -1.5
PRKD3-210ENST00000494667 PACS2Q86VP3 889 aa5.66□□□□□ -1.5
PRKD3-210ENST00000494667 EFCAB13Q8IY85 973 aa5.66□□□□□ -1.5
PRKD3-210ENST00000494667 KCNB2Q92953 911 aa5.66□□□□□ -1.5
PRKD3-210ENST00000494667 API5Q9BZZ5 524 aaKnown RBP5.66□□□□□ -1.5
PRKD3-210ENST00000494667 FAM107BQ9H098 131 aa5.66□□□□□ -1.5
PRKD3-210ENST00000494667 CXorf56Q9H5V9 222 aa5.66□□□□□ -1.5
PRKD3-210ENST00000494667 IFT57Q9NWB7 429 aa5.66□□□□□ -1.5
PRKD3-210ENST00000494667 CCP110O43303 1012 aa5.66□□□□□ -1.5
PRKD3-210ENST00000494667 MAP3K11Q16584 847 aa5.66□□□□□ -1.5
PRKD3-210ENST00000494667 MORC1Q86VD1 984 aa5.66□□□□□ -1.5
PRKD3-210ENST00000494667 FCHSD1Q86WN1 690 aa5.66□□□□□ -1.5
PRKD3-210ENST00000494667 CERS3Q8IU89 383 aa5.66□□□□□ -1.5
PRKD3-210ENST00000494667 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.66□□□□□ -1.5
PRKD3-210ENST00000494667 TBC1D22AQ8WUA7 517 aa5.66□□□□□ -1.5
PRKD3-210ENST00000494667 ESYT1Q9BSJ8 1104 aa5.66□□□□□ -1.5
PRKD3-210ENST00000494667 CBX8Q9HC52 389 aa5.66□□□□□ -1.5
PRKD3-210ENST00000494667 MYCNP04198 464 aaPredicted RBP5.66□□□□□ -1.5
PRKD3-210ENST00000494667 TUBB4BP68371 445 aa5.66□□□□□ -1.5
PRKD3-210ENST00000494667 SF3B2Q13435 895 aaKnown RBP5.66□□□□□ -1.5
PRKD3-210ENST00000494667 TMCO3Q6UWJ1 677 aa5.66□□□□□ -1.5
PRKD3-210ENST00000494667 BANK1Q8NDB2 785 aa5.66□□□□□ -1.5
PRKD3-210ENST00000494667 STAP2Q9UGK3 403 aa5.66□□□□□ -1.5
PRKD3-210ENST00000494667 ARHGEF10O15013 1369 aa5.66□□□□□ -1.5
PRKD3-210ENST00000494667 XRN1Q8IZH2 1706 aaKnown RBP5.65□□□□□ -1.5
PRKD3-210ENST00000494667 IQCB1Q15051 598 aa5.65□□□□□ -1.5
PRKD3-210ENST00000494667 CLSTN2Q9H4D0 955 aa5.65□□□□□ -1.5
PRKD3-210ENST00000494667 ABCC6O95255 1503 aa5.65□□□□□ -1.5
PRKD3-210ENST00000494667 ATP7AQ04656 1500 aa5.65□□□□□ -1.5
PRKD3-210ENST00000494667 VAMP4O75379 141 aa5.65□□□□□ -1.5
PRKD3-210ENST00000494667 HSPA4P34932 840 aa5.65□□□□□ -1.5
PRKD3-210ENST00000494667 USP5P45974 858 aa5.65□□□□□ -1.5
PRKD3-210ENST00000494667 LRMPQ12912 555 aa5.65□□□□□ -1.5
PRKD3-210ENST00000494667 CHAMP1Q96JM3 812 aa5.65□□□□□ -1.5
PRKD3-210ENST00000494667 DNAI1Q9UI46 699 aa5.65□□□□□ -1.5
PRKD3-210ENST00000494667 CNPY2Q9Y2B0 182 aa5.65□□□□□ -1.5
PRKD3-210ENST00000494667 TRIM66O15016 1216 aa5.65□□□□□ -1.51
PRKD3-210ENST00000494667 STX6O43752 255 aa5.65□□□□□ -1.51
PRKD3-210ENST00000494667 APPP05067 770 aa5.65□□□□□ -1.51
PRKD3-210ENST00000494667 NEK4P51957 841 aa5.65□□□□□ -1.51
PRKD3-210ENST00000494667 CCDC144BQ3MJ40 725 aa5.65□□□□□ -1.51
PRKD3-210ENST00000494667 CC2D1AQ6P1N0 951 aaPredicted RBP5.65□□□□□ -1.51
PRKD3-210ENST00000494667 RSRC2Q7L4I2 434 aaKnown RBP5.65□□□□□ -1.51
PRKD3-210ENST00000494667 CCDC144CPQ8IYA2 1237 aa5.65□□□□□ -1.51
PRKD3-210ENST00000494667 GPR161Q8N6U8 529 aaKnown RBP5.65□□□□□ -1.51
PRKD3-210ENST00000494667 NEK11Q8NG66 645 aa5.65□□□□□ -1.51
PRKD3-210ENST00000494667 TSR2Q969E8 191 aaKnown RBP5.65□□□□□ -1.51
PRKD3-210ENST00000494667 DEF6Q9H4E7 631 aa5.65□□□□□ -1.51
PRKD3-210ENST00000494667 ALDH8A1Q9H2A2 487 aaPredicted RBP5.65□□□□□ -1.51
PRKD3-210ENST00000494667 RRP7AQ9Y3A4 280 aaKnown RBP5.65□□□□□ -1.51
PRKD3-210ENST00000494667 PPP1R12AO14974 1030 aaPredicted RBP5.64□□□□□ -1.51
PRKD3-210ENST00000494667 MTHFSP49914 203 aa5.64□□□□□ -1.51
PRKD3-210ENST00000494667 ST5P78524 1137 aa5.64□□□□□ -1.51
PRKD3-210ENST00000494667 DDR1Q08345 913 aa5.64□□□□□ -1.51
PRKD3-210ENST00000494667 GIMAP6Q6P9H5 292 aa5.64□□□□□ -1.51
PRKD3-210ENST00000494667 CCDC150Q8NCX0 1101 aa5.64□□□□□ -1.51
PRKD3-210ENST00000494667 BPIFA3Q9BQP9 254 aa5.64□□□□□ -1.51
PRKD3-210ENST00000494667 CLIP2Q9UDT6 1046 aa5.64□□□□□ -1.51
PRKD3-210ENST00000494667 MED1Q15648 1581 aaPredicted RBP5.64□□□□□ -1.51
PRKD3-210ENST00000494667 ANKRD33BA6NCL7 494 aa5.64□□□□□ -1.51
PRKD3-210ENST00000494667 KCNA4P22459 653 aa5.64□□□□□ -1.51
PRKD3-210ENST00000494667 OAS2P29728 719 aaKnown RBP5.64□□□□□ -1.51
PRKD3-210ENST00000494667 ATP6V1AP38606 617 aa5.64□□□□□ -1.51
PRKD3-210ENST00000494667 PSME1Q06323 249 aa5.64□□□□□ -1.51
PRKD3-210ENST00000494667 FUT8Q9BYC5 575 aa5.64□□□□□ -1.51
PRKD3-210ENST00000494667 NUP62CLQ9H1M0 184 aa5.64□□□□□ -1.51
PRKD3-210ENST00000494667 MTMR6Q9Y217 621 aa5.64□□□□□ -1.51
PRKD3-210ENST00000494667 NPHP3Q7Z494 1330 aa5.64□□□□□ -1.51
PRKD3-210ENST00000494667 ATP7BP35670 1465 aa5.64□□□□□ -1.51
PRKD3-210ENST00000494667 CEP170BQ9Y4F5 1589 aaPredicted RBP5.64□□□□□ -1.51
PRKD3-210ENST00000494667 CACNA1FO60840 1977 aa5.64□□□□□ -1.51
PRKD3-210ENST00000494667 MRC2Q9UBG0 1479 aa5.64□□□□□ -1.51
PRKD3-210ENST00000494667 A0A087WUV0 522 aaPredicted RBP5.64□□□□□ -1.51
PRKD3-210ENST00000494667 SASH3O75995 380 aa5.64□□□□□ -1.51
PRKD3-210ENST00000494667 SMC1AQ14683 1233 aaKnown RBP5.64□□□□□ -1.51
PRKD3-210ENST00000494667 BRD3Q15059 726 aa5.64□□□□□ -1.51
PRKD3-210ENST00000494667 LRRFIP1Q32MZ4 808 aaKnown RBP5.64□□□□□ -1.51
PRKD3-210ENST00000494667 C10orf67Q8IYJ2 551 aa5.64□□□□□ -1.51
PRKD3-210ENST00000494667 PXDNLA1KZ92 1463 aa5.63□□□□□ -1.51
PRKD3-210ENST00000494667 USP27XA6NNY8 438 aa5.63□□□□□ -1.51
PRKD3-210ENST00000494667 EIF3CLB5ME19 914 aaKnown RBP5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms