RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 MICALL1Q8N3F8 863 aa9.02□□□□□ -0.97
BRCA1-221ENST00000493795 ABTB2Q8N961 1025 aa9.02□□□□□ -0.97
BRCA1-221ENST00000493795 PPP1R9BQ96SB3 815 aa9.02□□□□□ -0.97
BRCA1-221ENST00000493795 ADAMTS8Q9UP79 889 aa9.02□□□□□ -0.97
BRCA1-221ENST00000493795 AKAP2Q9Y2D5 859 aa9.02□□□□□ -0.97
BRCA1-221ENST00000493795 MYL6BP14649 208 aa9.02□□□□□ -0.97
BRCA1-221ENST00000493795 MTHFSP49914 203 aa9.02□□□□□ -0.97
BRCA1-221ENST00000493795 NLRP5P59047 1200 aa9.02□□□□□ -0.97
BRCA1-221ENST00000493795 CCDC144CPQ8IYA2 1237 aa9.02□□□□□ -0.97
BRCA1-221ENST00000493795 CABP2Q9NPB3 220 aa9.02□□□□□ -0.97
BRCA1-221ENST00000493795 CASQ2O14958 399 aaPredicted RBP9.01□□□□□ -0.97
BRCA1-221ENST00000493795 SNX16P57768 344 aa9.01□□□□□ -0.97
BRCA1-221ENST00000493795 SPINK5Q9NQ38 1064 aaPredicted RBP9.01□□□□□ -0.97
BRCA1-221ENST00000493795 SLC12A7Q9Y666 1083 aa9.01□□□□□ -0.97
BRCA1-221ENST00000493795 TTC36A6NLP5 189 aa9.01□□□□□ -0.97
BRCA1-221ENST00000493795 CIB2O75838 187 aa9.01□□□□□ -0.97
BRCA1-221ENST00000493795 KANK3Q6NY19 840 aa9.01□□□□□ -0.97
BRCA1-221ENST00000493795 TCP11L1Q9NUJ3 509 aa9.01□□□□□ -0.97
BRCA1-221ENST00000493795 CTAGE15A4D2H0 777 aa9.01□□□□□ -0.97
BRCA1-221ENST00000493795 STX6O43752 255 aa9.01□□□□□ -0.97
BRCA1-221ENST00000493795 CTAGE8P0CG41 777 aa9.01□□□□□ -0.97
BRCA1-221ENST00000493795 GNG11P61952 73 aa9.01□□□□□ -0.97
BRCA1-221ENST00000493795 CTAGE6Q86UF2 777 aa9.01□□□□□ -0.97
BRCA1-221ENST00000493795 CTAGE4Q8IX94 777 aa9.01□□□□□ -0.97
BRCA1-221ENST00000493795 SELENOSQ9BQE4 189 aa9.01□□□□□ -0.97
BRCA1-221ENST00000493795 BACH2Q9BYV9 841 aa9.01□□□□□ -0.97
BRCA1-221ENST00000493795 STRN4Q9NRL3 753 aa9.01□□□□□ -0.97
BRCA1-221ENST00000493795 SWAP70Q9UH65 585 aa9.01□□□□□ -0.97
BRCA1-221ENST00000493795 SETDB1Q15047 1291 aa9.01□□□□□ -0.97
BRCA1-221ENST00000493795 CCDC14Q49A88 953 aa9.01□□□□□ -0.97
BRCA1-221ENST00000493795 TTC31Q49AM3 519 aaPredicted RBP9.01□□□□□ -0.97
BRCA1-221ENST00000493795 PRIMPOLQ96LW4 560 aa9.01□□□□□ -0.97
BRCA1-221ENST00000493795 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.01□□□□□ -0.974e-6■■□□□ 13.9
BRCA1-221ENST00000493795 MVPQ14764 893 aaKnown RBP9□□□□□ -0.97
BRCA1-221ENST00000493795 CFAP157Q5JU67 520 aa9□□□□□ -0.97
BRCA1-221ENST00000493795 USP37Q86T82 979 aa9□□□□□ -0.97
BRCA1-221ENST00000493795 ZNF444Q8N0Y2 327 aaPredicted RBP9□□□□□ -0.97
BRCA1-221ENST00000493795 FSIP1Q8NA03 581 aa9□□□□□ -0.97
BRCA1-221ENST00000493795 MINDY4BA8MYZ0 360 aa9□□□□□ -0.97
BRCA1-221ENST00000493795 BCAR3O75815 825 aa9□□□□□ -0.97
BRCA1-221ENST00000493795 CAVIN4Q5BKX8 364 aa9□□□□□ -0.97
BRCA1-221ENST00000493795 UTP14AQ9BVJ6 771 aaKnown RBP9□□□□□ -0.97
BRCA1-221ENST00000493795 SRRTQ9BXP5 876 aaKnown RBP9□□□□□ -0.97
BRCA1-221ENST00000493795 ABCF2Q9UG63 623 aa9□□□□□ -0.97
BRCA1-221ENST00000493795 SCAPERQ9BY12 1400 aa9□□□□□ -0.97
BRCA1-221ENST00000493795 IQCA1Q86XH1 822 aa9□□□□□ -0.97
BRCA1-221ENST00000493795 NAPBQ9H115 298 aa9□□□□□ -0.97
BRCA1-221ENST00000493795 USP25Q9UHP3 1055 aa9□□□□□ -0.97
BRCA1-221ENST00000493795 RFC1P35251 1148 aaPredicted RBP9□□□□□ -0.97
BRCA1-221ENST00000493795 PRPF40BQ6NWY9 871 aaKnown RBP9□□□□□ -0.97
BRCA1-221ENST00000493795 BICD1Q96G01 975 aa9□□□□□ -0.97
BRCA1-221ENST00000493795 MYCNP04198 464 aaPredicted RBP9□□□□□ -0.97
BRCA1-221ENST00000493795 CYLC1P35663 651 aaPredicted RBP9□□□□□ -0.97
BRCA1-221ENST00000493795 LACTBP83111 547 aaPredicted RBP9□□□□□ -0.97
BRCA1-221ENST00000493795 GSTA5Q7RTV2 222 aa9□□□□□ -0.97
BRCA1-221ENST00000493795 RNF41Q9H4P4 317 aaPredicted RBP9□□□□□ -0.97
BRCA1-221ENST00000493795 GOLGA8AA7E2F4 631 aa8.99□□□□□ -0.97
BRCA1-221ENST00000493795 GOLGA8BA8MQT2 603 aa8.99□□□□□ -0.97
BRCA1-221ENST00000493795 AKR1B10O60218 316 aa8.99□□□□□ -0.97
BRCA1-221ENST00000493795 METTL24Q5JXM2 366 aa8.99□□□□□ -0.97
BRCA1-221ENST00000493795 WDR78Q5VTH9 848 aa8.99□□□□□ -0.97
BRCA1-221ENST00000493795 STMN2Q93045 179 aa8.99□□□□□ -0.97
BRCA1-221ENST00000493795 RMND1Q9NWS8 449 aa8.99□□□□□ -0.97
BRCA1-221ENST00000493795 TBCAO75347 108 aaKnown RBP8.99□□□□□ -0.97
BRCA1-221ENST00000493795 ATP2A2P16615 1042 aaKnown RBP8.99□□□□□ -0.97
BRCA1-221ENST00000493795 SATB1Q01826 763 aa8.99□□□□□ -0.97
BRCA1-221ENST00000493795 MPHOSPH6Q99547 160 aaKnown RBP8.99□□□□□ -0.97
BRCA1-221ENST00000493795 ARFGAP3Q9NP61 516 aa8.99□□□□□ -0.97
BRCA1-221ENST00000493795 IDEP14735 1019 aa8.99□□□□□ -0.97
BRCA1-221ENST00000493795 ATF7IPQ6VMQ6 1270 aa8.99□□□□□ -0.97
BRCA1-221ENST00000493795 RPAP2Q8IXW5 612 aaPredicted RBP8.99□□□□□ -0.97
BRCA1-221ENST00000493795 CKAP2LQ8IYA6 745 aa8.99□□□□□ -0.97
BRCA1-221ENST00000493795 ZSWIM4Q9H7M6 989 aa8.99□□□□□ -0.97
BRCA1-221ENST00000493795 LUC7L2Q9Y383 392 aaKnown RBP8.99□□□□□ -0.97
BRCA1-221ENST00000493795 KRT13P13646 458 aa8.99□□□□□ -0.97
BRCA1-221ENST00000493795 CATIPQ7Z7H3 387 aa8.99□□□□□ -0.97
BRCA1-221ENST00000493795 TRIM7Q9C029 511 aa8.99□□□□□ -0.97
BRCA1-221ENST00000493795 SAMD15Q9P1V8 674 aa8.99□□□□□ -0.97
BRCA1-221ENST00000493795 RAB11FIP3O75154 756 aa8.98□□□□□ -0.97
BRCA1-221ENST00000493795 LMBR1Q8WVP7 490 aa8.98□□□□□ -0.97
BRCA1-221ENST00000493795 PRPF31Q8WWY3 499 aaKnown RBP8.98□□□□□ -0.97
BRCA1-221ENST00000493795 SEC62Q99442 399 aaKnown RBP8.98□□□□□ -0.97
BRCA1-221ENST00000493795 IL1RAPL2Q9NP60 686 aa8.98□□□□□ -0.97
BRCA1-221ENST00000493795 EXOC1Q9NV70 894 aa8.98□□□□□ -0.97
BRCA1-221ENST00000493795 TXNDC16Q9P2K2 825 aa8.98□□□□□ -0.97
BRCA1-221ENST00000493795 HMGB1P1B2RPK0 211 aaPredicted RBP8.98□□□□□ -0.97
BRCA1-221ENST00000493795 ADCY5O95622 1261 aa8.98□□□□□ -0.97
BRCA1-221ENST00000493795 UVSSAQ2YD98 709 aa8.98□□□□□ -0.97
BRCA1-221ENST00000493795 ZNF530Q6P9A1 599 aaPredicted RBP8.98□□□□□ -0.97
BRCA1-221ENST00000493795 SLF2Q8IX21 1173 aa8.98□□□□□ -0.97
BRCA1-221ENST00000493795 CCDC114Q96M63 670 aa8.98□□□□□ -0.97
BRCA1-221ENST00000493795 VCX3BQ9H321 246 aa8.98□□□□□ -0.97
BRCA1-221ENST00000493795 WDR70Q9NW82 654 aa8.98□□□□□ -0.97
BRCA1-221ENST00000493795 EBAG9O00559 213 aa8.98□□□□□ -0.97
BRCA1-221ENST00000493795 RANBP6O60518 1105 aaKnown RBP8.98□□□□□ -0.97
BRCA1-221ENST00000493795 CAVIN2O95810 425 aa8.98□□□□□ -0.97
BRCA1-221ENST00000493795 ESCO1Q5FWF5 840 aa8.98□□□□□ -0.97
BRCA1-221ENST00000493795 GBP6Q6ZN66 633 aa8.98□□□□□ -0.97
BRCA1-221ENST00000493795 NUTM1Q86Y26 1132 aa8.98□□□□□ -0.97
BRCA1-221ENST00000493795 GBP7Q8N8V2 638 aaPredicted RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms