RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 HOXB7P09629 217 aa9.06□□□□□ -0.96
TOP3A-207ENST00000493648 ZNF853P0CG23 659 aa9.06□□□□□ -0.96
TOP3A-207ENST00000493648 DPEP1P16444 411 aa9.06□□□□□ -0.96
TOP3A-207ENST00000493648 YBX3P16989 372 aaKnown RBP eCLIP9.06□□□□□ -0.96
TOP3A-207ENST00000493648 CHMP4AQ9BY43 222 aa9.06□□□□□ -0.96
TOP3A-207ENST00000493648 MBIPQ9NS73 344 aa9.06□□□□□ -0.96
TOP3A-207ENST00000493648 PIM2Q9P1W9 311 aa9.06□□□□□ -0.96
TOP3A-207ENST00000493648 CARMIL3Q8ND23 1372 aa9.06□□□□□ -0.96
TOP3A-207ENST00000493648 H0YIN7 160 aa9.05□□□□□ -0.96
TOP3A-207ENST00000493648 PDE6BP35913 854 aa9.05□□□□□ -0.96
TOP3A-207ENST00000493648 HDGFL1Q5TGJ6 251 aa9.05□□□□□ -0.96
TOP3A-207ENST00000493648 DUSP27Q5VZP5 1158 aa9.05□□□□□ -0.96
TOP3A-207ENST00000493648 TPTE2Q6XPS3 522 aa9.05□□□□□ -0.96
TOP3A-207ENST00000493648 WWC1Q8IX03 1113 aa9.05□□□□□ -0.96
TOP3A-207ENST00000493648 NECTIN2Q92692 538 aa9.05□□□□□ -0.96
TOP3A-207ENST00000493648 WWC3Q9ULE0 1092 aa9.05□□□□□ -0.96
TOP3A-207ENST00000493648 PDZRN3Q9UPQ7 1066 aa9.05□□□□□ -0.96
TOP3A-207ENST00000493648 NIP7Q9Y221 180 aaKnown RBP eCLIP9.05□□□□□ -0.96
TOP3A-207ENST00000493648 BCS1LQ9Y276 419 aa9.05□□□□□ -0.96
TOP3A-207ENST00000493648 CHD4Q14839 1912 aa9.05□□□□□ -0.96
TOP3A-207ENST00000493648 AFDNP55196 1824 aaKnown RBP9.05□□□□□ -0.96
TOP3A-207ENST00000493648 MAP3K15Q6ZN16 1313 aa9.05□□□□□ -0.96
TOP3A-207ENST00000493648 N4BP2Q86UW6 1770 aaPredicted RBP9.04□□□□□ -0.96
TOP3A-207ENST00000493648 PXDNLA1KZ92 1463 aa9.04□□□□□ -0.96
TOP3A-207ENST00000493648 SENP3-EIF4A1A0A087X0R7 540 aa9.04□□□□□ -0.96
TOP3A-207ENST00000493648 KCNA3P22001 575 aa9.04□□□□□ -0.96
TOP3A-207ENST00000493648 GTF2E1P29083 439 aaPredicted RBP9.04□□□□□ -0.96
TOP3A-207ENST00000493648 CHRNA5P30532 468 aa9.04□□□□□ -0.96
TOP3A-207ENST00000493648 ST5P78524 1137 aa9.04□□□□□ -0.96
TOP3A-207ENST00000493648 PDIA6Q15084 440 aa9.04□□□□□ -0.96
TOP3A-207ENST00000493648 HLFQ16534 295 aa9.04□□□□□ -0.96
TOP3A-207ENST00000493648 KRT24Q2M2I5 525 aa9.04□□□□□ -0.96
TOP3A-207ENST00000493648 DALRD3Q5D0E6 543 aaKnown RBP9.04□□□□□ -0.96
TOP3A-207ENST00000493648 PRR5LQ6MZQ0 368 aa9.04□□□□□ -0.96
TOP3A-207ENST00000493648 TTLL7Q6ZT98 887 aa9.04□□□□□ -0.96
TOP3A-207ENST00000493648 NBPF5PQ86XG9 351 aaPredicted RBP9.04□□□□□ -0.96
TOP3A-207ENST00000493648 CNBD1Q8NA66 436 aa9.04□□□□□ -0.96
TOP3A-207ENST00000493648 BRIP1Q9BX63 1249 aa9.04□□□□□ -0.96
TOP3A-207ENST00000493648 DDX21Q9NR30 783 aaKnown RBP eCLIP9.04□□□□□ -0.96
TOP3A-207ENST00000493648 DBF4Q9UBU7 674 aaPredicted RBP9.04□□□□□ -0.96
TOP3A-207ENST00000493648 SALL2Q9Y467 1007 aaPredicted RBP9.04□□□□□ -0.96
TOP3A-207ENST00000493648 SCN7AQ01118 1682 aa9.04□□□□□ -0.96
TOP3A-207ENST00000493648 ELL2O00472 640 aaPredicted RBP9.03□□□□□ -0.96
TOP3A-207ENST00000493648 AIMP1Q12904 312 aaKnown RBP9.03□□□□□ -0.96
TOP3A-207ENST00000493648 GIGYF2Q6Y7W6 1299 aaKnown RBP9.03□□□□□ -0.96
TOP3A-207ENST00000493648 COPS6Q7L5N1 327 aa9.03□□□□□ -0.96
TOP3A-207ENST00000493648 C2CD5Q86YS7 1000 aa9.03□□□□□ -0.96
TOP3A-207ENST00000493648 WDR63Q8IWG1 891 aa9.03□□□□□ -0.96
TOP3A-207ENST00000493648 ZBTB3Q9H5J0 574 aa9.03□□□□□ -0.96
TOP3A-207ENST00000493648 HYPKQ9NX55 129 aa9.03□□□□□ -0.96
TOP3A-207ENST00000493648 BCORQ6W2J9 1755 aa9.03□□□□□ -0.96
TOP3A-207ENST00000493648 IL16Q14005 1332 aa9.03□□□□□ -0.96
TOP3A-207ENST00000493648 NRXN2Q9P2S2 1712 aa9.02□□□□□ -0.96
TOP3A-207ENST00000493648 FAM177BA6PVY3 158 aa9.02□□□□□ -0.97
TOP3A-207ENST00000493648 CCER2I3L3R5 266 aa9.02□□□□□ -0.97
TOP3A-207ENST00000493648 ANXA1P04083 346 aa9.02□□□□□ -0.97
TOP3A-207ENST00000493648 PROSER3Q2NL68 480 aa9.02□□□□□ -0.97
TOP3A-207ENST00000493648 HSP90AB3PQ58FF7 597 aa9.02□□□□□ -0.97
TOP3A-207ENST00000493648 ARHGAP27Q6ZUM4 889 aa9.02□□□□□ -0.97
TOP3A-207ENST00000493648 LRP10Q7Z4F1 713 aa9.02□□□□□ -0.97
TOP3A-207ENST00000493648 CCDC24Q8N4L8 307 aa9.02□□□□□ -0.97
TOP3A-207ENST00000493648 C8orf58Q8NAV2 365 aa9.02□□□□□ -0.97
TOP3A-207ENST00000493648 XAGE3Q8WTP9 111 aa9.02□□□□□ -0.97
TOP3A-207ENST00000493648 NYXQ9GZU5 481 aa9.02□□□□□ -0.97
TOP3A-207ENST00000493648 CHPF2Q9P2E5 772 aa9.02□□□□□ -0.97
TOP3A-207ENST00000493648 NUP98P52948 1817 aa9.02□□□□□ -0.97
TOP3A-207ENST00000493648 GPTP24298 496 aa9.01□□□□□ -0.97
TOP3A-207ENST00000493648 CCDC30Q5VVM6 783 aa9.01□□□□□ -0.97
TOP3A-207ENST00000493648 ANKRD13DQ6ZTN6 518 aa9.01□□□□□ -0.97
TOP3A-207ENST00000493648 PPP1R42Q7Z4L9 355 aa9.01□□□□□ -0.97
TOP3A-207ENST00000493648 ZNF34Q8IZ26 560 aa9.01□□□□□ -0.97
TOP3A-207ENST00000493648 TTLL6Q8N841 843 aa9.01□□□□□ -0.97
TOP3A-207ENST00000493648 TSR2Q969E8 191 aaKnown RBP9.01□□□□□ -0.97
TOP3A-207ENST00000493648 ZNF622Q969S3 477 aaKnown RBP eCLIP9.01□□□□□ -0.97
TOP3A-207ENST00000493648 KIAA1551Q9HCM1 1747 aa9.01□□□□□ -0.97
TOP3A-207ENST00000493648 GOLGA2Q08379 1002 aa9□□□□□ -0.97
TOP3A-207ENST00000493648 TCIRG1Q13488 830 aa9□□□□□ -0.97
TOP3A-207ENST00000493648 PARP10Q53GL7 1025 aa9□□□□□ -0.97
TOP3A-207ENST00000493648 DIEXFQ68CQ4 756 aaKnown RBP9□□□□□ -0.97
TOP3A-207ENST00000493648 CNKSR1Q969H4 720 aa9□□□□□ -0.97
TOP3A-207ENST00000493648 MASTLQ96GX5 879 aa9□□□□□ -0.97
TOP3A-207ENST00000493648 MYH16Q9H6N6 1097 aa9□□□□□ -0.97
TOP3A-207ENST00000493648 ATP10DQ9P241 1426 aa8.99□□□□□ -0.97
TOP3A-207ENST00000493648 SRGNP10124 158 aa8.99□□□□□ -0.97
TOP3A-207ENST00000493648 TWISTNBQ3B726 338 aaPredicted RBP8.99□□□□□ -0.97
TOP3A-207ENST00000493648 SUSD4Q5VX71 490 aa8.99□□□□□ -0.97
TOP3A-207ENST00000493648 STYK1Q6J9G0 422 aa8.99□□□□□ -0.97
TOP3A-207ENST00000493648 RIC3Q7Z5B4 369 aa8.99□□□□□ -0.97
TOP3A-207ENST00000493648 PLBD2Q8NHP8 589 aa8.99□□□□□ -0.97
TOP3A-207ENST00000493648 UTP14AQ9BVJ6 771 aaKnown RBP8.99□□□□□ -0.97
TOP3A-207ENST00000493648 STK31Q9BXU1 1019 aa8.99□□□□□ -0.97
TOP3A-207ENST00000493648 BRCA1P38398 1863 aaKnown RBP8.99□□□□□ -0.97
TOP3A-207ENST00000493648 KLRG2A4D1S0 409 aaPredicted RBP8.98□□□□□ -0.97
TOP3A-207ENST00000493648 DDX58O95786 925 aaKnown RBP8.98□□□□□ -0.97
TOP3A-207ENST00000493648 NPR1P16066 1061 aa8.98□□□□□ -0.97
TOP3A-207ENST00000493648 ALDH1B1P30837 517 aa8.98□□□□□ -0.97
TOP3A-207ENST00000493648 ERFEQ4G0M1 354 aa8.98□□□□□ -0.97
TOP3A-207ENST00000493648 NUTM1Q86Y26 1132 aa8.98□□□□□ -0.97
TOP3A-207ENST00000493648 TSPYL6Q8N831 410 aa8.98□□□□□ -0.97
TOP3A-207ENST00000493648 UBN2Q6ZU65 1347 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms