RNA–Protein interactions for RNA: ENST00000493359.1

NCKAP1-207, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 615 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-207ENST00000493359 VAC14Q08AM6 782 aa8.84□□□□□ -0.99
NCKAP1-207ENST00000493359 FUT2Q10981 343 aa8.84□□□□□ -0.99
NCKAP1-207ENST00000493359 SSH2Q76I76 1423 aa8.84□□□□□ -0.99
NCKAP1-207ENST00000493359 SLF2Q8IX21 1173 aa8.84□□□□□ -0.99
NCKAP1-207ENST00000493359 LRRN4Q8WUT4 740 aa8.84□□□□□ -0.99
NCKAP1-207ENST00000493359 PBXIP1Q96AQ6 731 aa8.84□□□□□ -0.99
NCKAP1-207ENST00000493359 KCTD12Q96CX2 325 aaKnown RBP8.84□□□□□ -0.99
NCKAP1-207ENST00000493359 C19orf44Q9H6X5 657 aa8.84□□□□□ -0.99
NCKAP1-207ENST00000493359 LRRC7Q96NW7 1537 aa8.84□□□□□ -0.99
NCKAP1-207ENST00000493359 SENP3-EIF4A1A0A087X0R7 540 aa8.83□□□□□ -1
NCKAP1-207ENST00000493359 U2SURPO15042 1029 aaKnown RBP8.83□□□□□ -1
NCKAP1-207ENST00000493359 DIAPH1O60610 1272 aaKnown RBP8.83□□□□□ -1
NCKAP1-207ENST00000493359 U2AF1L5P0DN76 240 aaPredicted RBP8.83□□□□□ -1
NCKAP1-207ENST00000493359 U2AF1Q01081 240 aaKnown RBP eCLIP8.83□□□□□ -17e-11■■□□□ 12.5
NCKAP1-207ENST00000493359 PDE3BQ13370 1112 aa8.83□□□□□ -1
NCKAP1-207ENST00000493359 CCDC146Q8IYE0 955 aa8.83□□□□□ -1
NCKAP1-207ENST00000493359 NGEFQ8N5V2 710 aa8.83□□□□□ -1
NCKAP1-207ENST00000493359 TRIM34Q9BYJ4 488 aa8.83□□□□□ -1
NCKAP1-207ENST00000493359 NBPF3Q9H094 633 aa8.83□□□□□ -1
NCKAP1-207ENST00000493359 PNNQ9H307 717 aaKnown RBP8.83□□□□□ -1
NCKAP1-207ENST00000493359 SALL2Q9Y467 1007 aaPredicted RBP8.83□□□□□ -1
NCKAP1-207ENST00000493359 PIK3C2AO00443 1686 aa8.83□□□□□ -1
NCKAP1-207ENST00000493359 STRCP1A6NGW2 1772 aa8.83□□□□□ -1
NCKAP1-207ENST00000493359 USP31Q70CQ4 1352 aa8.83□□□□□ -1
NCKAP1-207ENST00000493359 C1orf167Q5SNV9 1468 aa8.83□□□□□ -1
NCKAP1-207ENST00000493359 MAPK8IP3Q9UPT6 1336 aa8.82□□□□□ -1
NCKAP1-207ENST00000493359 USP54Q70EL1 1684 aa8.82□□□□□ -1
NCKAP1-207ENST00000493359 CFAP99D6REC4 459 aa8.82□□□□□ -1
NCKAP1-207ENST00000493359 NEFMP07197 916 aa8.82□□□□□ -1
NCKAP1-207ENST00000493359 CFHP08603 1231 aa8.82□□□□□ -1
NCKAP1-207ENST00000493359 PSME1Q06323 249 aa8.82□□□□□ -1
NCKAP1-207ENST00000493359 FAM98CQ17RN3 349 aaKnown RBP8.82□□□□□ -1
NCKAP1-207ENST00000493359 RUNDC1Q96C34 613 aa8.82□□□□□ -1
NCKAP1-207ENST00000493359 MST1RQ04912 1400 aa8.81□□□□□ -1
NCKAP1-207ENST00000493359 GOLGA8CPA6NN73 597 aa8.81□□□□□ -1
NCKAP1-207ENST00000493359 ATP6V1AP38606 617 aa8.81□□□□□ -1
NCKAP1-207ENST00000493359 POLKQ9UBT6 870 aa8.81□□□□□ -1
NCKAP1-207ENST00000493359 EMILIN1Q9Y6C2 1016 aa8.81□□□□□ -1
NCKAP1-207ENST00000493359 PNPLA6Q8IY17 1366 aa8.81□□□□□ -1
NCKAP1-207ENST00000493359 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.8□□□□□ -1
NCKAP1-207ENST00000493359 CSB-PGBD3P0DP91 1061 aa8.8□□□□□ -1
NCKAP1-207ENST00000493359 RRS1Q15050 365 aaKnown RBP8.8□□□□□ -1
NCKAP1-207ENST00000493359 SAMD7Q7Z3H4 446 aa8.8□□□□□ -1
NCKAP1-207ENST00000493359 ABTB2Q8N961 1025 aa8.8□□□□□ -1
NCKAP1-207ENST00000493359 PNMA1Q8ND90 353 aa8.8□□□□□ -1
NCKAP1-207ENST00000493359 ADAMTS19Q8TE59 1207 aa8.8□□□□□ -1
NCKAP1-207ENST00000493359 PPP1R12CQ9BZL4 782 aa8.8□□□□□ -1
NCKAP1-207ENST00000493359 IQSEC2Q5JU85 1478 aa8.8□□□□□ -1
NCKAP1-207ENST00000493359 ZNF335Q9H4Z2 1342 aaPredicted RBP8.8□□□□□ -1
NCKAP1-207ENST00000493359 APAF1O14727 1248 aa8.79□□□□□ -1
NCKAP1-207ENST00000493359 KMT5BQ4FZB7 885 aa8.79□□□□□ -1
NCKAP1-207ENST00000493359 PRR7Q8TB68 274 aa8.79□□□□□ -1
NCKAP1-207ENST00000493359 ORAI2Q96SN7 254 aa8.79□□□□□ -1
NCKAP1-207ENST00000493359 SBNO1A3KN83 1393 aa8.78□□□□□ -1
NCKAP1-207ENST00000493359 FLT4P35916 1363 aa8.78□□□□□ -1
NCKAP1-207ENST00000493359 KIF24Q5T7B8 1368 aa8.78□□□□□ -1
NCKAP1-207ENST00000493359 PATL2C9JE40 543 aaKnown RBP8.78□□□□□ -1
NCKAP1-207ENST00000493359 AMPHP49418 695 aa8.78□□□□□ -1
NCKAP1-207ENST00000493359 SEMA3FQ13275 785 aa8.78□□□□□ -1
NCKAP1-207ENST00000493359 TMCO4Q5TGY1 634 aa8.78□□□□□ -1
NCKAP1-207ENST00000493359 EPS8L1Q8TE68 723 aa8.78□□□□□ -1
NCKAP1-207ENST00000493359 SYMPKQ92797 1274 aaKnown RBP8.78□□□□□ -1
NCKAP1-207ENST00000493359 WNT2BQ93097 391 aa8.78□□□□□ -1
NCKAP1-207ENST00000493359 GZF1Q9H116 711 aaPredicted RBP8.78□□□□□ -1
NCKAP1-207ENST00000493359 NPHP3Q7Z494 1330 aa8.78□□□□□ -1
NCKAP1-207ENST00000493359 RTL1A6NKG5 1358 aa8.77□□□□□ -1.01
NCKAP1-207ENST00000493359 FOXO3O43524 673 aa8.77□□□□□ -1.01
NCKAP1-207ENST00000493359 FBLN1P23142 703 aa8.77□□□□□ -1.01
NCKAP1-207ENST00000493359 LMOD1P29536 600 aaPredicted RBP8.77□□□□□ -1.01
NCKAP1-207ENST00000493359 SOX11P35716 441 aa8.77□□□□□ -1.01
NCKAP1-207ENST00000493359 NUTM2GQ5VZR2 741 aa8.77□□□□□ -1.01
NCKAP1-207ENST00000493359 KRT28Q7Z3Y7 464 aa8.77□□□□□ -1.01
NCKAP1-207ENST00000493359 KCNH5Q8NCM2 988 aa8.77□□□□□ -1.01
NCKAP1-207ENST00000493359 ALG2Q9H553 416 aa8.77□□□□□ -1.01
NCKAP1-207ENST00000493359 MAP2P11137 1827 aaKnown RBP8.77□□□□□ -1.01
NCKAP1-207ENST00000493359 TRPM3Q9HCF6 1732 aaPredicted RBP8.77□□□□□ -1.01
NCKAP1-207ENST00000493359 XIRP1Q702N8 1843 aaKnown RBP8.76□□□□□ -1.01
NCKAP1-207ENST00000493359 PALM3A6NDB9 673 aaPredicted RBP8.76□□□□□ -1.01
NCKAP1-207ENST00000493359 GPR37L1O60883 481 aa8.76□□□□□ -1.01
NCKAP1-207ENST00000493359 NR6A1Q15406 480 aa8.76□□□□□ -1.01
NCKAP1-207ENST00000493359 LAPTM4BQ86VI4 370 aa8.76□□□□□ -1.01
NCKAP1-207ENST00000493359 TCP11L2Q8N4U5 519 aa8.76□□□□□ -1.01
NCKAP1-207ENST00000493359 USTQ9Y2C2 406 aa8.76□□□□□ -1.01
NCKAP1-207ENST00000493359 SUPT16HQ9Y5B9 1047 aaKnown RBP8.76□□□□□ -1.01
NCKAP1-207ENST00000493359 PEAK1Q9H792 1746 aa8.76□□□□□ -1.01
NCKAP1-207ENST00000493359 MARF1Q9Y4F3 1742 aaKnown RBP8.76□□□□□ -1.01
NCKAP1-207ENST00000493359 MAP3K19Q56UN5 1328 aa8.76□□□□□ -1.01
NCKAP1-207ENST00000493359 SLIT3O75094 1523 aa8.75□□□□□ -1.01
NCKAP1-207ENST00000493359 TNS3Q68CZ2 1445 aa8.75□□□□□ -1.01
NCKAP1-207ENST00000493359 E9PSI1 815 aa8.75□□□□□ -1.01
NCKAP1-207ENST00000493359 IL13P35225 146 aa8.75□□□□□ -1.01
NCKAP1-207ENST00000493359 PTPN5P54829 565 aa8.75□□□□□ -1.01
NCKAP1-207ENST00000493359 XPCQ01831 940 aaPredicted RBP8.75□□□□□ -1.01
NCKAP1-207ENST00000493359 Q3C1V9 767 aa8.75□□□□□ -1.01
NCKAP1-207ENST00000493359 RETREG3Q86VR2 466 aa8.75□□□□□ -1.01
NCKAP1-207ENST00000493359 ZFRQ96KR1 1074 aaKnown RBP8.75□□□□□ -1.01
NCKAP1-207ENST00000493359 TFIP11Q9UBB9 837 aaKnown RBP8.75□□□□□ -1.01
NCKAP1-207ENST00000493359 RRP7AQ9Y3A4 280 aaKnown RBP8.75□□□□□ -1.01
NCKAP1-207ENST00000493359 ZNF521Q96K83 1311 aa8.75□□□□□ -1.01
NCKAP1-207ENST00000493359 NFAT5O94916 1531 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms