RNA–Protein interactions for RNA: ENST00000493217.1

TSC22D4-205, Transcript of TSC22 domain family member 4, humanhuman

TSL 1 (best)

Gene TSC22D4, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D4-205ENST00000493217 SUCLG2Q96I99 432 aa22.95■■□□□ 1.26
TSC22D4-205ENST00000493217 ARXQ96QS3 562 aa22.95■■□□□ 1.26
TSC22D4-205ENST00000493217 PA2G4Q9UQ80 394 aaKnown RBP22.95■■□□□ 1.26
TSC22D4-205ENST00000493217 IGKV5-2P06315 115 aa22.94■■□□□ 1.26
TSC22D4-205ENST00000493217 MRE11P49959 708 aa22.94■■□□□ 1.26
TSC22D4-205ENST00000493217 SPATA31A3Q5VYP0 1347 aa22.94■■□□□ 1.26
TSC22D4-205ENST00000493217 CYP27B1O15528 508 aa22.94■■□□□ 1.26
TSC22D4-205ENST00000493217 CUL4AQ13619 759 aa22.94■■□□□ 1.26
TSC22D4-205ENST00000493217 CHRNA2Q15822 529 aa22.94■■□□□ 1.26
TSC22D4-205ENST00000493217 ZNF496Q96IT1 587 aaPredicted RBP22.94■■□□□ 1.26
TSC22D4-205ENST00000493217 DCAF5Q96JK2 942 aa22.94■■□□□ 1.26
TSC22D4-205ENST00000493217 ZDHHC9Q9Y397 364 aa22.94■■□□□ 1.26
TSC22D4-205ENST00000493217 LARP1Q6PKG0 1096 aaKnown RBP22.93■■□□□ 1.26
TSC22D4-205ENST00000493217 RIC3Q7Z5B4 369 aa22.93■■□□□ 1.26
TSC22D4-205ENST00000493217 BICC1Q9H694 974 aaKnown RBP22.93■■□□□ 1.26
TSC22D4-205ENST00000493217 RAD50Q92878 1312 aa22.93■■□□□ 1.26
TSC22D4-205ENST00000493217 MRC1P22897 1456 aa22.93■■□□□ 1.26
TSC22D4-205ENST00000493217 KLHL40Q2TBA0 621 aa22.92■■□□□ 1.26
TSC22D4-205ENST00000493217 ECHDC1Q9NTX5 307 aa22.92■■□□□ 1.26
TSC22D4-205ENST00000493217 CPDO75976 1380 aa22.92■■□□□ 1.26
TSC22D4-205ENST00000493217 MYL6BP14649 208 aa22.91■■□□□ 1.26
TSC22D4-205ENST00000493217 LRP10Q7Z4F1 713 aa22.91■■□□□ 1.26
TSC22D4-205ENST00000493217 MCTP1Q6DN14 999 aa22.91■■□□□ 1.26
TSC22D4-205ENST00000493217 INTS4Q96HW7 963 aaKnown RBP22.91■■□□□ 1.26
TSC22D4-205ENST00000493217 LSG1Q9H089 658 aaKnown RBP22.91■■□□□ 1.26
TSC22D4-205ENST00000493217 GRPEL1Q9HAV7 217 aa22.91■■□□□ 1.26
TSC22D4-205ENST00000493217 COPS6Q7L5N1 327 aa22.9■■□□□ 1.26
TSC22D4-205ENST00000493217 XAGE3Q8WTP9 111 aa22.9■■□□□ 1.26
TSC22D4-205ENST00000493217 PANK2Q9BZ23 570 aa22.9■■□□□ 1.26
TSC22D4-205ENST00000493217 UPF3BQ9BZI7 483 aaKnown RBP22.9■■□□□ 1.26
TSC22D4-205ENST00000493217 NEURL1BA8MQ27 555 aa22.89■■□□□ 1.26
TSC22D4-205ENST00000493217 SNRPA1P09661 255 aaKnown RBP22.89■■□□□ 1.26
TSC22D4-205ENST00000493217 NEXNQ0ZGT2 675 aa22.89■■□□□ 1.26
TSC22D4-205ENST00000493217 USP16Q9Y5T5 823 aa22.89■■□□□ 1.26
TSC22D4-205ENST00000493217 PKD1L3Q7Z443 1732 aa22.89■■□□□ 1.26
TSC22D4-205ENST00000493217 SASH1O94885 1247 aa22.89■■□□□ 1.25
TSC22D4-205ENST00000493217 IFIT2P09913 472 aaKnown RBP22.89■■□□□ 1.25
TSC22D4-205ENST00000493217 METTL22Q9BUU2 404 aaPredicted RBP22.89■■□□□ 1.25
TSC22D4-205ENST00000493217 LMBRD1Q9NUN5 540 aa22.89■■□□□ 1.25
TSC22D4-205ENST00000493217 DDX49Q9Y6V7 483 aaKnown RBP22.89■■□□□ 1.25
TSC22D4-205ENST00000493217 GCKRQ14397 625 aa22.88■■□□□ 1.25
TSC22D4-205ENST00000493217 CWC27Q6UX04 472 aaKnown RBP22.88■■□□□ 1.25
TSC22D4-205ENST00000493217 GAS2L3Q86XJ1 694 aa22.88■■□□□ 1.25
TSC22D4-205ENST00000493217 TTC5Q8N0Z6 440 aa22.88■■□□□ 1.25
TSC22D4-205ENST00000493217 GPATCH3Q96I76 525 aa22.88■■□□□ 1.25
TSC22D4-205ENST00000493217 ANKRD13DQ6ZTN6 518 aa22.87■■□□□ 1.25
TSC22D4-205ENST00000493217 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.87■■□□□ 1.25
TSC22D4-205ENST00000493217 G3BP1Q13283 466 aaKnown RBP eCLIP22.86■■□□□ 1.25
TSC22D4-205ENST00000493217 AACSQ86V21 672 aa22.86■■□□□ 1.25
TSC22D4-205ENST00000493217 FMNL2Q96PY5 1086 aa22.86■■□□□ 1.25
TSC22D4-205ENST00000493217 SNX14Q9Y5W7 946 aa22.86■■□□□ 1.25
TSC22D4-205ENST00000493217 KIAA1211Q6ZU35 1233 aa22.85■■□□□ 1.25
TSC22D4-205ENST00000493217 FAM43AQ8N2R8 423 aa22.85■■□□□ 1.25
TSC22D4-205ENST00000493217 EAF2Q96CJ1 260 aaPredicted RBP22.85■■□□□ 1.25
TSC22D4-205ENST00000493217 MYD88Q99836 296 aa22.85■■□□□ 1.25
TSC22D4-205ENST00000493217 DIAPH3Q9NSV4 1193 aa22.85■■□□□ 1.25
TSC22D4-205ENST00000493217 NOL8Q76FK4 1167 aaKnown RBP22.84■■□□□ 1.25
TSC22D4-205ENST00000493217 RUFY2Q8WXA3 655 aa22.84■■□□□ 1.25
TSC22D4-205ENST00000493217 EVI5LQ96CN4 794 aa22.84■■□□□ 1.25
TSC22D4-205ENST00000493217 BRD1O95696 1058 aa22.83■■□□□ 1.25
TSC22D4-205ENST00000493217 CABP4P57796 275 aa22.83■■□□□ 1.25
TSC22D4-205ENST00000493217 BRINP3Q76B58 766 aa22.83■■□□□ 1.25
TSC22D4-205ENST00000493217 RASEFQ8IZ41 740 aa22.83■■□□□ 1.25
TSC22D4-205ENST00000493217 HSPA2P54652 639 aa22.83■■□□□ 1.24
TSC22D4-205ENST00000493217 EPHA10Q5JZY3 1008 aa22.83■■□□□ 1.24
TSC22D4-205ENST00000493217 TTC14Q96N46 770 aa22.83■■□□□ 1.24
TSC22D4-205ENST00000493217 PIP4K2AP48426 406 aaPredicted RBP22.81■■□□□ 1.24
TSC22D4-205ENST00000493217 XIRP1Q702N8 1843 aaKnown RBP22.81■■□□□ 1.24
TSC22D4-205ENST00000493217 PRPF40AO75400 957 aaKnown RBP22.8■■□□□ 1.24
TSC22D4-205ENST00000493217 KLHDC4Q8TBB5 520 aa22.8■■□□□ 1.24
TSC22D4-205ENST00000493217 CCDC8Q9H0W5 538 aaPredicted RBP22.8■■□□□ 1.24
TSC22D4-205ENST00000493217 SIL1Q9H173 461 aa22.8■■□□□ 1.24
TSC22D4-205ENST00000493217 PARP4Q9UKK3 1724 aaKnown RBP22.8■■□□□ 1.24
TSC22D4-205ENST00000493217 GLI3P10071 1580 aa22.8■■□□□ 1.24
TSC22D4-205ENST00000493217 COL15A1P39059 1388 aa22.79■■□□□ 1.24
TSC22D4-205ENST00000493217 PTH1RQ03431 593 aa22.79■■□□□ 1.24
TSC22D4-205ENST00000493217 TLR7Q9NYK1 1049 aaKnown RBP22.79■■□□□ 1.24
TSC22D4-205ENST00000493217 WDR17Q8IZU2 1322 aa22.79■■□□□ 1.24
TSC22D4-205ENST00000493217 COPRSQ9NQ92 184 aa22.78■■□□□ 1.24
TSC22D4-205ENST00000493217 KCNB2Q92953 911 aa22.78■■□□□ 1.24
TSC22D4-205ENST00000493217 CHAMP1Q96JM3 812 aa22.78■■□□□ 1.24
TSC22D4-205ENST00000493217 RABL6Q3YEC7 729 aaPredicted RBP22.77■■□□□ 1.24
TSC22D4-205ENST00000493217 HIP1O00291 1037 aa22.77■■□□□ 1.23
TSC22D4-205ENST00000493217 RFX5P48382 616 aaPredicted RBP22.77■■□□□ 1.23
TSC22D4-205ENST00000493217 AK2P54819 239 aa22.77■■□□□ 1.23
TSC22D4-205ENST00000493217 ZNF445P59923 1031 aa22.77■■□□□ 1.23
TSC22D4-205ENST00000493217 FOXD4L5Q5VV16 416 aaPredicted RBP22.77■■□□□ 1.23
TSC22D4-205ENST00000493217 CAVIN1Q6NZI2 390 aaKnown RBP22.77■■□□□ 1.23
TSC22D4-205ENST00000493217 GPT2Q8TD30 523 aa22.77■■□□□ 1.23
TSC22D4-205ENST00000493217 FOXD4L4Q8WXT5 416 aaPredicted RBP22.77■■□□□ 1.23
TSC22D4-205ENST00000493217 PRDM11Q9NQV5 511 aa22.77■■□□□ 1.23
TSC22D4-205ENST00000493217 PLBD2Q8NHP8 589 aa22.76■■□□□ 1.23
TSC22D4-205ENST00000493217 SNRKQ9NRH2 765 aa22.76■■□□□ 1.23
TSC22D4-205ENST00000493217 PCDH11XQ9BZA7 1347 aa22.76■■□□□ 1.23
TSC22D4-205ENST00000493217 PCDH11YQ9BZA8 1340 aa22.76■■□□□ 1.23
TSC22D4-205ENST00000493217 ARFGEF2Q9Y6D5 1785 aa22.76■■□□□ 1.23
TSC22D4-205ENST00000493217 PTPN12Q05209 780 aaKnown RBP22.75■■□□□ 1.23
TSC22D4-205ENST00000493217 NECTIN1Q15223 517 aa22.75■■□□□ 1.23
TSC22D4-205ENST00000493217 ZCRB1Q8TBF4 217 aaKnown RBP22.75■■□□□ 1.23
TSC22D4-205ENST00000493217 LAMB4A4D0S4 1761 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms