RNA–Protein interactions for RNA: ENST00000492650.1

VPS36-205, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 5

Gene VPS36, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-205ENST00000492650 HCN4Q9Y3Q4 1203 aa7.2□□□□□ -1.26
VPS36-205ENST00000492650 ADH6P28332 368 aa7.19□□□□□ -1.26
VPS36-205ENST00000492650 PCBP4P57723 403 aaKnown RBP7.19□□□□□ -1.26
VPS36-205ENST00000492650 LARP1Q6PKG0 1096 aaKnown RBP7.19□□□□□ -1.26
VPS36-205ENST00000492650 SIX5Q8N196 739 aa7.19□□□□□ -1.26
VPS36-205ENST00000492650 MAFBQ9Y5Q3 323 aaPredicted RBP7.19□□□□□ -1.26
VPS36-205ENST00000492650 A6NJR5 290 aa7.18□□□□□ -1.26
VPS36-205ENST00000492650 M0R2N6 131 aa7.18□□□□□ -1.26
VPS36-205ENST00000492650 PPP1R12BO60237 982 aaPredicted RBP7.18□□□□□ -1.26
VPS36-205ENST00000492650 LAMC2Q13753 1193 aa7.18□□□□□ -1.26
VPS36-205ENST00000492650 PLA2G4EQ3MJ16 856 aa7.18□□□□□ -1.26
VPS36-205ENST00000492650 STRN4Q9NRL3 753 aa7.18□□□□□ -1.26
VPS36-205ENST00000492650 EFSO43281 561 aa7.17□□□□□ -1.26
VPS36-205ENST00000492650 SEC13P55735 322 aa7.17□□□□□ -1.26
VPS36-205ENST00000492650 CHMP7Q8WUX9 453 aaPredicted RBP7.17□□□□□ -1.26
VPS36-205ENST00000492650 HINFPQ9BQA5 517 aa7.17□□□□□ -1.26
VPS36-205ENST00000492650 PPP1R12CQ9BZL4 782 aa7.17□□□□□ -1.26
VPS36-205ENST00000492650 AVENQ9NQS1 362 aaPredicted RBP7.17□□□□□ -1.26
VPS36-205ENST00000492650 KLF15Q9UIH9 416 aa7.17□□□□□ -1.26
VPS36-205ENST00000492650 GPC6Q9Y625 555 aaPredicted RBP7.17□□□□□ -1.26
VPS36-205ENST00000492650 PIK3R2O00459 728 aa7.16□□□□□ -1.26
VPS36-205ENST00000492650 SUZ12Q15022 739 aaKnown RBP7.16□□□□□ -1.26
VPS36-205ENST00000492650 ZNF468Q5VIY5 522 aaPredicted RBP7.16□□□□□ -1.26
VPS36-205ENST00000492650 C1orf53Q5VUE5 145 aa7.16□□□□□ -1.26
VPS36-205ENST00000492650 LINC00114Q6XXX2 140 aa7.16□□□□□ -1.26
VPS36-205ENST00000492650 CHSY3Q70JA7 882 aa7.16□□□□□ -1.26
VPS36-205ENST00000492650 FCHSD1Q86WN1 690 aa7.16□□□□□ -1.26
VPS36-205ENST00000492650 C7orf43Q8WVR3 580 aa7.16□□□□□ -1.26
VPS36-205ENST00000492650 PHACTR1Q9C0D0 580 aa7.16□□□□□ -1.26
VPS36-205ENST00000492650 ANKIB1Q9P2G1 1089 aa7.16□□□□□ -1.26
VPS36-205ENST00000492650 ATAD2Q6PL18 1390 aa7.16□□□□□ -1.26
VPS36-205ENST00000492650 MSTNO14793 375 aa7.15□□□□□ -1.26
VPS36-205ENST00000492650 DKK1O94907 266 aa7.15□□□□□ -1.26
VPS36-205ENST00000492650 LMOD1P29536 600 aaPredicted RBP7.15□□□□□ -1.26
VPS36-205ENST00000492650 SFSWAPQ12872 951 aaKnown RBP7.15□□□□□ -1.26
VPS36-205ENST00000492650 GRIN2CQ14957 1233 aa7.15□□□□□ -1.26
VPS36-205ENST00000492650 SYT9Q86SS6 491 aa7.15□□□□□ -1.26
VPS36-205ENST00000492650 SCG3Q8WXD2 468 aaKnown RBP7.15□□□□□ -1.26
VPS36-205ENST00000492650 HSH2DQ96JZ2 352 aa7.15□□□□□ -1.26
VPS36-205ENST00000492650 CEP63Q96MT8 703 aa7.15□□□□□ -1.26
VPS36-205ENST00000492650 GNB5O14775 395 aa7.14□□□□□ -1.27
VPS36-205ENST00000492650 C21orf2O43822 256 aa7.14□□□□□ -1.27
VPS36-205ENST00000492650 HOXB4P17483 251 aaPredicted RBP7.14□□□□□ -1.27
VPS36-205ENST00000492650 HIRAP54198 1017 aaPredicted RBP7.14□□□□□ -1.27
VPS36-205ENST00000492650 CRTC2Q53ET0 693 aaPredicted RBP7.14□□□□□ -1.27
VPS36-205ENST00000492650 NGLY1Q96IV0 654 aa7.14□□□□□ -1.27
VPS36-205ENST00000492650 SUV39H2Q9H5I1 410 aa7.14□□□□□ -1.27
VPS36-205ENST00000492650 VRTNQ9H8Y1 702 aa7.14□□□□□ -1.27
VPS36-205ENST00000492650 LGR5O75473 907 aa7.13□□□□□ -1.27
VPS36-205ENST00000492650 ALAS2P22557 587 aa7.13□□□□□ -1.27
VPS36-205ENST00000492650 COL8A1P27658 744 aa7.13□□□□□ -1.27
VPS36-205ENST00000492650 ALYREFQ86V81 257 aaKnown RBP7.13□□□□□ -1.27
VPS36-205ENST00000492650 ALDH16A1Q8IZ83 802 aa7.13□□□□□ -1.27
VPS36-205ENST00000492650 GAS2L2Q8NHY3 880 aa7.13□□□□□ -1.27
VPS36-205ENST00000492650 SUSD3Q96L08 255 aa7.13□□□□□ -1.27
VPS36-205ENST00000492650 SPOCK3Q9BQ16 436 aa7.13□□□□□ -1.27
VPS36-205ENST00000492650 BRD7Q9NPI1 651 aa7.13□□□□□ -1.27
VPS36-205ENST00000492650 ZNF777Q9ULD5 760 aaPredicted RBP7.13□□□□□ -1.27
VPS36-205ENST00000492650 KRBA1A5PL33 1030 aa7.12□□□□□ -1.27
VPS36-205ENST00000492650 DGKGP49619 791 aa7.12□□□□□ -1.27
VPS36-205ENST00000492650 DPYDQ12882 1025 aa7.12□□□□□ -1.27
VPS36-205ENST00000492650 PTK7Q13308 1070 aa7.12□□□□□ -1.27
VPS36-205ENST00000492650 NEUROD1Q13562 356 aa7.12□□□□□ -1.27
VPS36-205ENST00000492650 KANK4Q5T7N3 995 aaPredicted RBP7.12□□□□□ -1.27
VPS36-205ENST00000492650 ZNF280CQ8ND82 737 aa7.12□□□□□ -1.27
VPS36-205ENST00000492650 SLC30A3Q99726 388 aa7.12□□□□□ -1.27
VPS36-205ENST00000492650 C2orf49Q9BVC5 232 aaPredicted RBP7.12□□□□□ -1.27
VPS36-205ENST00000492650 ELOA3CA0A087WX78 387 aaPredicted RBP7.11□□□□□ -1.27
VPS36-205ENST00000492650 ELOA3DA6NLF2 546 aaPredicted RBP7.11□□□□□ -1.27
VPS36-205ENST00000492650 USP17L15C9J2P7 530 aa7.11□□□□□ -1.27
VPS36-205ENST00000492650 USP17L10C9JJH3 530 aa7.11□□□□□ -1.27
VPS36-205ENST00000492650 USP17L13C9JLJ4 530 aa7.11□□□□□ -1.27
VPS36-205ENST00000492650 USP17L12C9JPN9 530 aa7.11□□□□□ -1.27
VPS36-205ENST00000492650 USP17L11C9JVI0 530 aa7.11□□□□□ -1.27
VPS36-205ENST00000492650 USP17L21D6R901 530 aa7.11□□□□□ -1.27
VPS36-205ENST00000492650 USP17L18D6R9N7 530 aa7.11□□□□□ -1.27
VPS36-205ENST00000492650 USP17L22D6RA61 530 aa7.11□□□□□ -1.27
VPS36-205ENST00000492650 USP17L17D6RBQ6 530 aa7.11□□□□□ -1.27
VPS36-205ENST00000492650 USP17L19D6RCP7 530 aa7.11□□□□□ -1.27
VPS36-205ENST00000492650 USP17L20D6RJB6 530 aa7.11□□□□□ -1.27
VPS36-205ENST00000492650 ITGB2P05107 769 aa7.11□□□□□ -1.27
VPS36-205ENST00000492650 SPEM2Q0P670 501 aa7.11□□□□□ -1.27
VPS36-205ENST00000492650 USP17L24Q0WX57 530 aa7.11□□□□□ -1.27
VPS36-205ENST00000492650 ELOA3BQ3SY89 546 aa7.11□□□□□ -1.27
VPS36-205ENST00000492650 POTEAQ6S8J7 498 aa7.11□□□□□ -1.27
VPS36-205ENST00000492650 ANKMY2Q8IV38 441 aa7.11□□□□□ -1.27
VPS36-205ENST00000492650 STAG2Q8N3U4 1231 aa7.11□□□□□ -1.27
VPS36-205ENST00000492650 ELOA3Q8NG57 546 aa7.11□□□□□ -1.27
VPS36-205ENST00000492650 NOP53Q9NZM5 478 aaKnown RBP7.11□□□□□ -1.27
VPS36-205ENST00000492650 KCNH4Q9UQ05 1017 aa7.11□□□□□ -1.27
VPS36-205ENST00000492650 SIN3BO75182 1162 aa7.1□□□□□ -1.27
VPS36-205ENST00000492650 RAB44Q7Z6P3 723 aaPredicted RBP7.1□□□□□ -1.27
VPS36-205ENST00000492650 FAM196BA6NMK8 535 aa7.09□□□□□ -1.27
VPS36-205ENST00000492650 TYRO3Q06418 890 aa7.09□□□□□ -1.27
VPS36-205ENST00000492650 HIF1AQ16665 826 aa7.09□□□□□ -1.27
VPS36-205ENST00000492650 PROCP04070 461 aa7.08□□□□□ -1.28
VPS36-205ENST00000492650 CDCA8Q53HL2 280 aa7.08□□□□□ -1.28
VPS36-205ENST00000492650 BTLAQ7Z6A9 289 aa7.08□□□□□ -1.28
VPS36-205ENST00000492650 PLVAPQ9BX97 442 aa7.08□□□□□ -1.28
VPS36-205ENST00000492650 RFX1P22670 979 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms