RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 KIF13BQ9NQT8 1826 aa23.26■■□□□ 1.31
ABCF3-217ENST00000489719 HLFQ16534 295 aa23.26■■□□□ 1.31
ABCF3-217ENST00000489719 CCDC184Q52MB2 194 aa23.26■■□□□ 1.31
ABCF3-217ENST00000489719 ZNF622Q969S3 477 aaKnown RBP eCLIP23.26■■□□□ 1.31
ABCF3-217ENST00000489719 CALD1Q05682 793 aaKnown RBP23.25■■□□□ 1.31
ABCF3-217ENST00000489719 CFAP44Q96MT7 982 aa23.25■■□□□ 1.31
ABCF3-217ENST00000489719 GTF2E1P29083 439 aaPredicted RBP23.24■■□□□ 1.31
ABCF3-217ENST00000489719 TTLL7Q6ZT98 887 aa23.24■■□□□ 1.31
ABCF3-217ENST00000489719 MRS2Q9HD23 443 aa23.24■■□□□ 1.31
ABCF3-217ENST00000489719 MAP3K15Q6ZN16 1313 aa23.24■■□□□ 1.31
ABCF3-217ENST00000489719 N4BP2Q86UW6 1770 aaPredicted RBP23.24■■□□□ 1.31
ABCF3-217ENST00000489719 FAM177BA6PVY3 158 aa23.23■■□□□ 1.31
ABCF3-217ENST00000489719 NECTIN2Q92692 538 aa23.23■■□□□ 1.31
ABCF3-217ENST00000489719 ZBTB3Q9H5J0 574 aa23.22■■□□□ 1.31
ABCF3-217ENST00000489719 GPBP1L1Q9HC44 474 aaPredicted RBP23.22■■□□□ 1.31
ABCF3-217ENST00000489719 ZNF526Q8TF50 670 aaPredicted RBP23.21■■□□□ 1.31
ABCF3-217ENST00000489719 ATP10DQ9P241 1426 aa23.2■■□□□ 1.3
ABCF3-217ENST00000489719 PDIA6Q15084 440 aa23.2■■□□□ 1.3
ABCF3-217ENST00000489719 KRT24Q2M2I5 525 aa23.2■■□□□ 1.3
ABCF3-217ENST00000489719 NYXQ9GZU5 481 aa23.2■■□□□ 1.3
ABCF3-217ENST00000489719 KDM3BQ7LBC6 1761 aa23.19■■□□□ 1.3
ABCF3-217ENST00000489719 GNAI1P63096 354 aa23.19■■□□□ 1.3
ABCF3-217ENST00000489719 C9orf131Q5VYM1 1079 aa23.19■■□□□ 1.3
ABCF3-217ENST00000489719 CNKSR1Q969H4 720 aa23.19■■□□□ 1.3
ABCF3-217ENST00000489719 KIAA1551Q9HCM1 1747 aa23.19■■□□□ 1.3
ABCF3-217ENST00000489719 ANXA1P04083 346 aa23.18■■□□□ 1.3
ABCF3-217ENST00000489719 STYK1Q6J9G0 422 aa23.18■■□□□ 1.3
ABCF3-217ENST00000489719 MASTLQ96GX5 879 aa23.18■■□□□ 1.3
ABCF3-217ENST00000489719 MBIPQ9NS73 344 aa23.18■■□□□ 1.3
ABCF3-217ENST00000489719 IFT57Q9NWB7 429 aa23.18■■□□□ 1.3
ABCF3-217ENST00000489719 HOXB7P09629 217 aa23.17■■□□□ 1.3
ABCF3-217ENST00000489719 ZNF853P0CG23 659 aa23.17■■□□□ 1.3
ABCF3-217ENST00000489719 SRGNP10124 158 aa23.17■■□□□ 1.3
ABCF3-217ENST00000489719 GPTP24298 496 aa23.17■■□□□ 1.3
ABCF3-217ENST00000489719 AIMP1Q12904 312 aaKnown RBP23.17■■□□□ 1.3
ABCF3-217ENST00000489719 PROSER3Q2NL68 480 aa23.17■■□□□ 1.3
ABCF3-217ENST00000489719 GIGYF2Q6Y7W6 1299 aaKnown RBP23.17■■□□□ 1.3
ABCF3-217ENST00000489719 COPS6Q7L5N1 327 aa23.17■■□□□ 1.3
ABCF3-217ENST00000489719 DDX21Q9NR30 783 aaKnown RBP eCLIP23.17■■□□□ 1.3
ABCF3-217ENST00000489719 NRXN2Q9P2S2 1712 aa23.16■■□□□ 1.3
ABCF3-217ENST00000489719 SCN7AQ01118 1682 aa23.16■■□□□ 1.3
ABCF3-217ENST00000489719 HDGFL1Q5TGJ6 251 aa23.16■■□□□ 1.3
ABCF3-217ENST00000489719 DUSP27Q5VZP5 1158 aa23.16■■□□□ 1.3
ABCF3-217ENST00000489719 ZNF219Q9P2Y4 722 aaPredicted RBP23.16■■□□□ 1.3
ABCF3-217ENST00000489719 AFDNP55196 1824 aaKnown RBP23.15■■□□□ 1.3
ABCF3-217ENST00000489719 LRP10Q7Z4F1 713 aa23.15■■□□□ 1.3
ABCF3-217ENST00000489719 XAGE3Q8WTP9 111 aa23.15■■□□□ 1.3
ABCF3-217ENST00000489719 RNF181Q9P0P0 153 aa23.15■■□□□ 1.3
ABCF3-217ENST00000489719 ADCY9O60503 1353 aa23.14■■□□□ 1.3
ABCF3-217ENST00000489719 C21orf2O43822 256 aa23.14■■□□□ 1.29
ABCF3-217ENST00000489719 NPR1P16066 1061 aa23.14■■□□□ 1.29
ABCF3-217ENST00000489719 C1QTNF8P60827 252 aa23.14■■□□□ 1.29
ABCF3-217ENST00000489719 PPP1R42Q7Z4L9 355 aa23.14■■□□□ 1.29
ABCF3-217ENST00000489719 ZNF34Q8IZ26 560 aa23.14■■□□□ 1.29
ABCF3-217ENST00000489719 KLRG2A4D1S0 409 aaPredicted RBP23.13■■□□□ 1.29
ABCF3-217ENST00000489719 CHPF2Q9P2E5 772 aa23.13■■□□□ 1.29
ABCF3-217ENST00000489719 DBF4Q9UBU7 674 aaPredicted RBP23.13■■□□□ 1.29
ABCF3-217ENST00000489719 PARP10Q53GL7 1025 aa23.12■■□□□ 1.29
ABCF3-217ENST00000489719 HSP90AB3PQ58FF7 597 aa23.12■■□□□ 1.29
ABCF3-217ENST00000489719 SUSD4Q5VX71 490 aa23.12■■□□□ 1.29
ABCF3-217ENST00000489719 NUTM1Q86Y26 1132 aa23.12■■□□□ 1.29
ABCF3-217ENST00000489719 SENP3-EIF4A1A0A087X0R7 540 aa23.11■■□□□ 1.29
ABCF3-217ENST00000489719 ELL2O00472 640 aaPredicted RBP23.11■■□□□ 1.29
ABCF3-217ENST00000489719 LMNB1P20700 586 aa23.11■■□□□ 1.29
ABCF3-217ENST00000489719 CCDC27Q2M243 656 aa23.11■■□□□ 1.29
ABCF3-217ENST00000489719 ERFEQ4G0M1 354 aa23.11■■□□□ 1.29
ABCF3-217ENST00000489719 CHMP4AQ9BY43 222 aa23.11■■□□□ 1.29
ABCF3-217ENST00000489719 LAMB4A4D0S4 1761 aa23.11■■□□□ 1.29
ABCF3-217ENST00000489719 ALDH1B1P30837 517 aa23.1■■□□□ 1.29
ABCF3-217ENST00000489719 RASSF7Q02833 373 aa23.1■■□□□ 1.29
ABCF3-217ENST00000489719 SOGA3Q5TF21 947 aa23.1■■□□□ 1.29
ABCF3-217ENST00000489719 PRPF40BQ6NWY9 871 aaKnown RBP23.1■■□□□ 1.29
ABCF3-217ENST00000489719 HYPKQ9NX55 129 aa23.1■■□□□ 1.29
ABCF3-217ENST00000489719 UTP14AQ9BVJ6 771 aaKnown RBP23.09■■□□□ 1.29
ABCF3-217ENST00000489719 BCORQ6W2J9 1755 aa23.09■■□□□ 1.29
ABCF3-217ENST00000489719 UBN2Q6ZU65 1347 aa23.08■■□□□ 1.29
ABCF3-217ENST00000489719 TCIRG1Q13488 830 aa23.08■■□□□ 1.29
ABCF3-217ENST00000489719 NCBP3Q53F19 620 aaKnown RBP23.08■■□□□ 1.29
ABCF3-217ENST00000489719 ANKRD13DQ6ZTN6 518 aa23.08■■□□□ 1.29
ABCF3-217ENST00000489719 WWC1Q8IX03 1113 aa23.08■■□□□ 1.29
ABCF3-217ENST00000489719 BRCA1P38398 1863 aaKnown RBP23.07■■□□□ 1.28
ABCF3-217ENST00000489719 NFKBIEO00221 500 aa23.06■■□□□ 1.28
ABCF3-217ENST00000489719 FAM9BQ8IZU0 186 aa23.06■■□□□ 1.28
ABCF3-217ENST00000489719 C8orf58Q8NAV2 365 aa23.06■■□□□ 1.28
ABCF3-217ENST00000489719 PLBD2Q8NHP8 589 aa23.06■■□□□ 1.28
ABCF3-217ENST00000489719 RPGRQ92834 1020 aaKnown RBP23.06■■□□□ 1.28
ABCF3-217ENST00000489719 SALL2Q9Y467 1007 aaPredicted RBP23.06■■□□□ 1.28
ABCF3-217ENST00000489719 NTSR2O95665 410 aa23.05■■□□□ 1.28
ABCF3-217ENST00000489719 NLRP3Q96P20 1036 aa23.05■■□□□ 1.28
ABCF3-217ENST00000489719 ARFGEF1Q9Y6D6 1849 aa23.05■■□□□ 1.28
ABCF3-217ENST00000489719 KDM2BQ8NHM5 1336 aa23.05■■□□□ 1.28
ABCF3-217ENST00000489719 IBTKQ9P2D0 1353 aaPredicted RBP23.04■■□□□ 1.28
ABCF3-217ENST00000489719 TAOK3Q9H2K8 898 aa23.04■■□□□ 1.28
ABCF3-217ENST00000489719 CRY2Q49AN0 593 aa23.03■■□□□ 1.28
ABCF3-217ENST00000489719 CCDC93Q567U6 631 aa23.03■■□□□ 1.28
ABCF3-217ENST00000489719 SLC10A5Q5PT55 438 aa23.03■■□□□ 1.28
ABCF3-217ENST00000489719 CCDC30Q5VVM6 783 aa23.03■■□□□ 1.28
ABCF3-217ENST00000489719 NLRP10Q86W26 655 aa23.03■■□□□ 1.28
ABCF3-217ENST00000489719 C7orf43Q8WVR3 580 aa23.03■■□□□ 1.28
ABCF3-217ENST00000489719 RBM17Q96I25 401 aaKnown RBP23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms