RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 DLEC1Q9Y238 1755 aa12.89□□□□□ -0.35
SSBP1-212ENST00000489378 HSPA8P11142 646 aaKnown RBP12.88□□□□□ -0.35
SSBP1-212ENST00000489378 DPY19L2Q6NUT2 758 aa12.88□□□□□ -0.35
SSBP1-212ENST00000489378 AFDNP55196 1824 aaKnown RBP12.88□□□□□ -0.35
SSBP1-212ENST00000489378 PASKQ96RG2 1323 aa12.88□□□□□ -0.35
SSBP1-212ENST00000489378 ADAMTS7Q9UKP4 1686 aa12.88□□□□□ -0.35
SSBP1-212ENST00000489378 KIF20BQ96Q89 1820 aa12.88□□□□□ -0.35
SSBP1-212ENST00000489378 SPOCK2Q92563 424 aa12.88□□□□□ -0.35
SSBP1-212ENST00000489378 CCDC85CA6NKD9 419 aa12.87□□□□□ -0.35
SSBP1-212ENST00000489378 ERVV-2B6SEH9 535 aa12.87□□□□□ -0.35
SSBP1-212ENST00000489378 PPM1GO15355 546 aaPredicted RBP12.87□□□□□ -0.35
SSBP1-212ENST00000489378 PTCD1O75127 700 aaKnown RBP12.87□□□□□ -0.35
SSBP1-212ENST00000489378 RGS19P49795 217 aa12.87□□□□□ -0.35
SSBP1-212ENST00000489378 TTLL6Q8N841 843 aa12.87□□□□□ -0.35
SSBP1-212ENST00000489378 DICER1Q9UPY3 1922 aaKnown RBP12.86□□□□□ -0.35
SSBP1-212ENST00000489378 USPL1Q5W0Q7 1092 aa12.86□□□□□ -0.35
SSBP1-212ENST00000489378 TJP1Q07157 1748 aa12.85□□□□□ -0.35
SSBP1-212ENST00000489378 NRXN2Q9P2S2 1712 aa12.85□□□□□ -0.35
SSBP1-212ENST00000489378 DDNO94850 711 aaPredicted RBP12.85□□□□□ -0.35
SSBP1-212ENST00000489378 NFIXQ14938 502 aa12.85□□□□□ -0.35
SSBP1-212ENST00000489378 ERFEQ4G0M1 354 aa12.85□□□□□ -0.35
SSBP1-212ENST00000489378 INTS5Q6P9B9 1019 aaKnown RBP12.85□□□□□ -0.35
SSBP1-212ENST00000489378 C2CD5Q86YS7 1000 aa12.85□□□□□ -0.35
SSBP1-212ENST00000489378 PDE4DIPQ5VU43 2346 aa12.84□□□□□ -0.35
SSBP1-212ENST00000489378 ST20-MTHFSA0A0A6YYL1 179 aa12.84□□□□□ -0.35
SSBP1-212ENST00000489378 TMEM88BA6NKF7 163 aa12.84□□□□□ -0.35
SSBP1-212ENST00000489378 SLAIN1Q8ND83 568 aa12.84□□□□□ -0.35
SSBP1-212ENST00000489378 WASHC2AQ641Q2 1341 aa12.84□□□□□ -0.35
SSBP1-212ENST00000489378 ANKRD26Q9UPS8 1709 aa12.84□□□□□ -0.35
SSBP1-212ENST00000489378 CARMIL3Q8ND23 1372 aa12.83□□□□□ -0.35
SSBP1-212ENST00000489378 CABP4P57796 275 aa12.83□□□□□ -0.36
SSBP1-212ENST00000489378 PDCD7Q8N8D1 485 aaKnown RBP12.83□□□□□ -0.36
SSBP1-212ENST00000489378 FER1L6Q2WGJ9 1857 aa12.83□□□□□ -0.36
SSBP1-212ENST00000489378 ZPR1O75312 459 aa12.82□□□□□ -0.36
SSBP1-212ENST00000489378 ITGBL1O95965 494 aaPredicted RBP12.82□□□□□ -0.36
SSBP1-212ENST00000489378 PSEN1P49768 467 aa12.82□□□□□ -0.36
SSBP1-212ENST00000489378 LDHDQ86WU2 507 aa12.82□□□□□ -0.36
SSBP1-212ENST00000489378 H0YIN7 160 aa12.81□□□□□ -0.36
SSBP1-212ENST00000489378 C21orf2O43822 256 aa12.81□□□□□ -0.36
SSBP1-212ENST00000489378 SERPINB2P05120 415 aa12.81□□□□□ -0.36
SSBP1-212ENST00000489378 HSP90AB1P08238 724 aaKnown RBP12.8□□□□□ -0.36
SSBP1-212ENST00000489378 TAF1DQ9H5J8 278 aaPredicted RBP12.8□□□□□ -0.36
SSBP1-212ENST00000489378 BCL2L12Q9HB09 334 aa12.8□□□□□ -0.36
SSBP1-212ENST00000489378 SOS1Q07889 1333 aaPredicted RBP12.8□□□□□ -0.36
SSBP1-212ENST00000489378 RASSF10A6NK89 507 aa12.79□□□□□ -0.36
SSBP1-212ENST00000489378 DEFB115Q30KQ5 88 aa12.79□□□□□ -0.36
SSBP1-212ENST00000489378 CARD14Q9BXL6 1004 aa12.79□□□□□ -0.36
SSBP1-212ENST00000489378 TNRC18O15417 2968 aaPredicted RBP12.79□□□□□ -0.36
SSBP1-212ENST00000489378 ANKRD31Q8N7Z5 1873 aa12.79□□□□□ -0.36
SSBP1-212ENST00000489378 MAP2K1Q02750 393 aaPredicted RBP12.79□□□□□ -0.36
SSBP1-212ENST00000489378 EIF4A2Q14240 407 aaKnown RBP12.79□□□□□ -0.36
SSBP1-212ENST00000489378 ZNF530Q6P9A1 599 aaPredicted RBP12.79□□□□□ -0.36
SSBP1-212ENST00000489378 DNAJC10Q8IXB1 793 aa12.79□□□□□ -0.36
SSBP1-212ENST00000489378 NFATC2IPQ8NCF5 419 aa12.79□□□□□ -0.36
SSBP1-212ENST00000489378 ZNF622Q969S3 477 aaKnown RBP eCLIP12.79□□□□□ -0.36
SSBP1-212ENST00000489378 NARFQ9UHQ1 456 aa12.79□□□□□ -0.36
SSBP1-212ENST00000489378 WDR33Q9C0J8 1336 aaKnown RBP12.79□□□□□ -0.36
SSBP1-212ENST00000489378 SCN4AP35499 1836 aa12.78□□□□□ -0.36
SSBP1-212ENST00000489378 IQCA1LA6NCM1 817 aa12.78□□□□□ -0.36
SSBP1-212ENST00000489378 COL11A2P13942 1736 aaPredicted RBP12.78□□□□□ -0.36
SSBP1-212ENST00000489378 EAPPQ56P03 285 aaPredicted RBP12.78□□□□□ -0.36
SSBP1-212ENST00000489378 L3MBTL3Q96JM7 780 aaPredicted RBP12.78□□□□□ -0.36
SSBP1-212ENST00000489378 TAOK3Q9H2K8 898 aa12.78□□□□□ -0.36
SSBP1-212ENST00000489378 LTBP3Q9NS15 1303 aa12.78□□□□□ -0.36
SSBP1-212ENST00000489378 MTHFSP49914 203 aa12.77□□□□□ -0.37
SSBP1-212ENST00000489378 PLEKHO1Q53GL0 409 aaPredicted RBP12.77□□□□□ -0.37
SSBP1-212ENST00000489378 CFAP44Q96MT7 982 aa12.77□□□□□ -0.37
SSBP1-212ENST00000489378 POLKQ9UBT6 870 aa12.77□□□□□ -0.37
SSBP1-212ENST00000489378 CIZ1Q9ULV3 898 aaPredicted RBP12.77□□□□□ -0.37
SSBP1-212ENST00000489378 COL15A1P39059 1388 aa12.76□□□□□ -0.37
SSBP1-212ENST00000489378 CCDC24Q8N4L8 307 aa12.76□□□□□ -0.37
SSBP1-212ENST00000489378 ADAMTSL1Q8N6G6 1762 aa12.76□□□□□ -0.37
SSBP1-212ENST00000489378 SLX4Q8IY92 1834 aa12.75□□□□□ -0.37
SSBP1-212ENST00000489378 CYP19A1P11511 503 aaPredicted RBP12.75□□□□□ -0.37
SSBP1-212ENST00000489378 MAP1SQ66K74 1059 aaPredicted RBP12.75□□□□□ -0.37
SSBP1-212ENST00000489378 BICDL1Q6ZP65 573 aa12.75□□□□□ -0.37
SSBP1-212ENST00000489378 TSKSQ9UJT2 592 aa12.75□□□□□ -0.37
SSBP1-212ENST00000489378 ABT1Q9ULW3 272 aaKnown RBP12.75□□□□□ -0.37
SSBP1-212ENST00000489378 THSD7BQ9C0I4 1608 aa12.75□□□□□ -0.37
SSBP1-212ENST00000489378 ST18O60284 1047 aa12.74□□□□□ -0.37
SSBP1-212ENST00000489378 PDAP1Q13442 181 aaKnown RBP12.74□□□□□ -0.37
SSBP1-212ENST00000489378 CNTROBQ8N137 903 aa12.74□□□□□ -0.37
SSBP1-212ENST00000489378 ZBTB1Q9Y2K1 713 aa12.74□□□□□ -0.37
SSBP1-212ENST00000489378 CACNA1SQ13698 1873 aa12.73□□□□□ -0.37
SSBP1-212ENST00000489378 ZNF541Q9H0D2 1346 aa12.73□□□□□ -0.37
SSBP1-212ENST00000489378 MKRN3Q13064 507 aaKnown RBP12.73□□□□□ -0.37
SSBP1-212ENST00000489378 MCOLN1Q9GZU1 580 aa12.73□□□□□ -0.37
SSBP1-212ENST00000489378 HACL1Q9UJ83 578 aa12.73□□□□□ -0.37
SSBP1-212ENST00000489378 EPHX2P34913 555 aa12.72□□□□□ -0.37
SSBP1-212ENST00000489378 PDE6BP35913 854 aa12.72□□□□□ -0.37
SSBP1-212ENST00000489378 AMOTQ4VCS5 1084 aa12.72□□□□□ -0.37
SSBP1-212ENST00000489378 C1orf141Q5JVX7 400 aa12.72□□□□□ -0.37
SSBP1-212ENST00000489378 CAPNS2Q96L46 248 aa12.72□□□□□ -0.37
SSBP1-212ENST00000489378 BRIP1Q9BX63 1249 aa12.72□□□□□ -0.37
SSBP1-212ENST00000489378 CASP8AP2Q9UKL3 1982 aa12.72□□□□□ -0.37
SSBP1-212ENST00000489378 FMR1Q06787 632 aaKnown RBP eCLIP12.71□□□□□ -0.37
SSBP1-212ENST00000489378 GRM1Q13255 1194 aa12.71□□□□□ -0.37
SSBP1-212ENST00000489378 TBC1D9BQ66K14 1250 aa12.71□□□□□ -0.37
SSBP1-212ENST00000489378 PRR5LQ6MZQ0 368 aa12.71□□□□□ -0.37
SSBP1-212ENST00000489378 PRPF40BQ6NWY9 871 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms