RNA–Protein interactions for RNA: ENST00000488910.1

ATG3-205, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 681 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-205ENST00000488910 CNBD1Q8NA66 436 aa22.83■■□□□ 1.25
ATG3-205ENST00000488910 LAS1LQ9Y4W2 734 aaKnown RBP22.83■■□□□ 1.25
ATG3-205ENST00000488910 MYL6BP14649 208 aa22.82■■□□□ 1.24
ATG3-205ENST00000488910 ST5P78524 1137 aa22.82■■□□□ 1.24
ATG3-205ENST00000488910 EIF2S2P20042 333 aaKnown RBP22.81■■□□□ 1.24
ATG3-205ENST00000488910 HLFQ16534 295 aa22.81■■□□□ 1.24
ATG3-205ENST00000488910 CCDC184Q52MB2 194 aa22.81■■□□□ 1.24
ATG3-205ENST00000488910 TPTE2Q6XPS3 522 aa22.81■■□□□ 1.24
ATG3-205ENST00000488910 KIF6Q6ZMV9 814 aa22.81■■□□□ 1.24
ATG3-205ENST00000488910 NBPF5PQ86XG9 351 aaPredicted RBP22.81■■□□□ 1.24
ATG3-205ENST00000488910 TTLL6Q8N841 843 aa22.81■■□□□ 1.24
ATG3-205ENST00000488910 CFAP44Q96MT7 982 aa22.81■■□□□ 1.24
ATG3-205ENST00000488910 NIP7Q9Y221 180 aaKnown RBP eCLIP22.81■■□□□ 1.24
ATG3-205ENST00000488910 MAP3K15Q6ZN16 1313 aa22.81■■□□□ 1.24
ATG3-205ENST00000488910 CALD1Q05682 793 aaKnown RBP22.8■■□□□ 1.24
ATG3-205ENST00000488910 ADCY9O60503 1353 aa22.79■■□□□ 1.24
ATG3-205ENST00000488910 PDIA6Q15084 440 aa22.78■■□□□ 1.24
ATG3-205ENST00000488910 TTLL7Q6ZT98 887 aa22.78■■□□□ 1.24
ATG3-205ENST00000488910 CCDC24Q8N4L8 307 aa22.78■■□□□ 1.24
ATG3-205ENST00000488910 DLEC1Q9Y238 1755 aa22.78■■□□□ 1.24
ATG3-205ENST00000488910 ANKRD31Q8N7Z5 1873 aa22.77■■□□□ 1.24
ATG3-205ENST00000488910 ATP10DQ9P241 1426 aa22.77■■□□□ 1.24
ATG3-205ENST00000488910 HOXB7P09629 217 aa22.77■■□□□ 1.24
ATG3-205ENST00000488910 ZNF622Q969S3 477 aaKnown RBP eCLIP22.77■■□□□ 1.24
ATG3-205ENST00000488910 ZNF853P0CG23 659 aa22.76■■□□□ 1.23
ATG3-205ENST00000488910 LRP10Q7Z4F1 713 aa22.76■■□□□ 1.23
ATG3-205ENST00000488910 MRS2Q9HD23 443 aa22.76■■□□□ 1.23
ATG3-205ENST00000488910 GNAI1P63096 354 aa22.75■■□□□ 1.23
ATG3-205ENST00000488910 NYXQ9GZU5 481 aa22.75■■□□□ 1.23
ATG3-205ENST00000488910 IFT57Q9NWB7 429 aa22.75■■□□□ 1.23
ATG3-205ENST00000488910 NUP98P52948 1817 aa22.75■■□□□ 1.23
ATG3-205ENST00000488910 SRGNP10124 158 aa22.74■■□□□ 1.23
ATG3-205ENST00000488910 STYK1Q6J9G0 422 aa22.74■■□□□ 1.23
ATG3-205ENST00000488910 GIGYF2Q6Y7W6 1299 aaKnown RBP22.74■■□□□ 1.23
ATG3-205ENST00000488910 CNKSR1Q969H4 720 aa22.74■■□□□ 1.23
ATG3-205ENST00000488910 ZBTB3Q9H5J0 574 aa22.74■■□□□ 1.23
ATG3-205ENST00000488910 DDX21Q9NR30 783 aaKnown RBP eCLIP22.74■■□□□ 1.23
ATG3-205ENST00000488910 MBIPQ9NS73 344 aa22.74■■□□□ 1.23
ATG3-205ENST00000488910 GTF2E1P29083 439 aaPredicted RBP22.73■■□□□ 1.23
ATG3-205ENST00000488910 KRT24Q2M2I5 525 aa22.73■■□□□ 1.23
ATG3-205ENST00000488910 MASTLQ96GX5 879 aa22.73■■□□□ 1.23
ATG3-205ENST00000488910 GPBP1L1Q9HC44 474 aaPredicted RBP22.73■■□□□ 1.23
ATG3-205ENST00000488910 KLRG2A4D1S0 409 aaPredicted RBP22.72■■□□□ 1.23
ATG3-205ENST00000488910 PROSER3Q2NL68 480 aa22.72■■□□□ 1.23
ATG3-205ENST00000488910 C9orf131Q5VYM1 1079 aa22.72■■□□□ 1.23
ATG3-205ENST00000488910 NECTIN2Q92692 538 aa22.72■■□□□ 1.23
ATG3-205ENST00000488910 FAM177BA6PVY3 158 aa22.71■■□□□ 1.23
ATG3-205ENST00000488910 CCDC27Q2M243 656 aa22.71■■□□□ 1.23
ATG3-205ENST00000488910 NCBP3Q53F19 620 aaKnown RBP22.71■■□□□ 1.23
ATG3-205ENST00000488910 HDGFL1Q5TGJ6 251 aa22.71■■□□□ 1.23
ATG3-205ENST00000488910 ZNF34Q8IZ26 560 aa22.71■■□□□ 1.23
ATG3-205ENST00000488910 ANXA1P04083 346 aa22.7■■□□□ 1.22
ATG3-205ENST00000488910 DUSP27Q5VZP5 1158 aa22.7■■□□□ 1.22
ATG3-205ENST00000488910 COPS6Q7L5N1 327 aa22.7■■□□□ 1.22
ATG3-205ENST00000488910 IBTKQ9P2D0 1353 aaPredicted RBP22.69■■□□□ 1.22
ATG3-205ENST00000488910 NPR1P16066 1061 aa22.69■■□□□ 1.22
ATG3-205ENST00000488910 PARP10Q53GL7 1025 aa22.69■■□□□ 1.22
ATG3-205ENST00000488910 XAGE3Q8WTP9 111 aa22.69■■□□□ 1.22
ATG3-205ENST00000488910 DBF4Q9UBU7 674 aaPredicted RBP22.69■■□□□ 1.22
ATG3-205ENST00000488910 GPTP24298 496 aa22.68■■□□□ 1.22
ATG3-205ENST00000488910 C1QTNF8P60827 252 aa22.68■■□□□ 1.22
ATG3-205ENST00000488910 PPP1R42Q7Z4L9 355 aa22.68■■□□□ 1.22
ATG3-205ENST00000488910 ZNF526Q8TF50 670 aaPredicted RBP22.68■■□□□ 1.22
ATG3-205ENST00000488910 COL11A2P13942 1736 aaPredicted RBP22.68■■□□□ 1.22
ATG3-205ENST00000488910 SBF1O95248 1867 aa22.67■■□□□ 1.22
ATG3-205ENST00000488910 UBN2Q6ZU65 1347 aa22.67■■□□□ 1.22
ATG3-205ENST00000488910 AIMP1Q12904 312 aaKnown RBP22.67■■□□□ 1.22
ATG3-205ENST00000488910 HSP90AB3PQ58FF7 597 aa22.67■■□□□ 1.22
ATG3-205ENST00000488910 SUSD4Q5VX71 490 aa22.67■■□□□ 1.22
ATG3-205ENST00000488910 CHMP4AQ9BY43 222 aa22.67■■□□□ 1.22
ATG3-205ENST00000488910 RNF181Q9P0P0 153 aa22.67■■□□□ 1.22
ATG3-205ENST00000488910 CHPF2Q9P2E5 772 aa22.67■■□□□ 1.22
ATG3-205ENST00000488910 C21orf2O43822 256 aa22.66■■□□□ 1.22
ATG3-205ENST00000488910 LMNB1P20700 586 aa22.66■■□□□ 1.22
ATG3-205ENST00000488910 SOGA3Q5TF21 947 aa22.66■■□□□ 1.22
ATG3-205ENST00000488910 HYPKQ9NX55 129 aa22.66■■□□□ 1.22
ATG3-205ENST00000488910 ERFEQ4G0M1 354 aa22.65■■□□□ 1.22
ATG3-205ENST00000488910 PRPF40BQ6NWY9 871 aaKnown RBP22.65■■□□□ 1.22
ATG3-205ENST00000488910 NUTM1Q86Y26 1132 aa22.65■■□□□ 1.22
ATG3-205ENST00000488910 WWC1Q8IX03 1113 aa22.65■■□□□ 1.22
ATG3-205ENST00000488910 ALDH1B1P30837 517 aa22.64■■□□□ 1.21
ATG3-205ENST00000488910 RASSF7Q02833 373 aa22.64■■□□□ 1.21
ATG3-205ENST00000488910 SLX4Q8IY92 1834 aa22.64■■□□□ 1.21
ATG3-205ENST00000488910 ZC3H4Q9UPT8 1303 aaKnown RBP22.63■■□□□ 1.21
ATG3-205ENST00000488910 NFKBIEO00221 500 aa22.63■■□□□ 1.21
ATG3-205ENST00000488910 NTSR2O95665 410 aa22.63■■□□□ 1.21
ATG3-205ENST00000488910 TCIRG1Q13488 830 aa22.63■■□□□ 1.21
ATG3-205ENST00000488910 CRY2Q49AN0 593 aa22.63■■□□□ 1.21
ATG3-205ENST00000488910 UTP14AQ9BVJ6 771 aaKnown RBP22.63■■□□□ 1.21
ATG3-205ENST00000488910 ZNF219Q9P2Y4 722 aaPredicted RBP22.63■■□□□ 1.21
ATG3-205ENST00000488910 ANKRD13DQ6ZTN6 518 aa22.62■■□□□ 1.21
ATG3-205ENST00000488910 PLBD2Q8NHP8 589 aa22.62■■□□□ 1.21
ATG3-205ENST00000488910 C7orf43Q8WVR3 580 aa22.62■■□□□ 1.21
ATG3-205ENST00000488910 RIC1Q4ADV7 1423 aa22.62■■□□□ 1.21
ATG3-205ENST00000488910 IL16Q14005 1332 aa22.61■■□□□ 1.21
ATG3-205ENST00000488910 RNF123Q5XPI4 1314 aa22.61■■□□□ 1.21
ATG3-205ENST00000488910 ARFGEF2Q9Y6D5 1785 aa22.61■■□□□ 1.21
ATG3-205ENST00000488910 ELL2O00472 640 aaPredicted RBP22.61■■□□□ 1.21
ATG3-205ENST00000488910 SLC10A5Q5PT55 438 aa22.61■■□□□ 1.21
ATG3-205ENST00000488910 C8orf58Q8NAV2 365 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms