RNA–Protein interactions for RNA: ENST00000488737.6

ABCB1-207, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 1 (best)

Gene ABCB1, Length 1,864 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-207ENST00000488737 ECHDC1Q9NTX5 307 aa17.2■□□□□ 0.34
ABCB1-207ENST00000488737 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.2■□□□□ 0.34
ABCB1-207ENST00000488737 TMEM94Q12767 1356 aa17.2■□□□□ 0.34
ABCB1-207ENST00000488737 DCCP43146 1447 aa17.2■□□□□ 0.34
ABCB1-207ENST00000488737 PRPF40AO75400 957 aaKnown RBP17.2■□□□□ 0.34
ABCB1-207ENST00000488737 MBD3O95983 291 aa17.2■□□□□ 0.34
ABCB1-207ENST00000488737 CLCN1P35523 988 aa17.2■□□□□ 0.34
ABCB1-207ENST00000488737 CCDC173Q0VFZ6 552 aa17.2■□□□□ 0.34
ABCB1-207ENST00000488737 CAVIN1Q6NZI2 390 aaKnown RBP17.2■□□□□ 0.34
ABCB1-207ENST00000488737 MRC1P22897 1456 aa17.19■□□□□ 0.34
ABCB1-207ENST00000488737 MAP4K4O95819 1239 aaPredicted RBP17.19■□□□□ 0.34
ABCB1-207ENST00000488737 NASPP49321 788 aaPredicted RBP17.19■□□□□ 0.34
ABCB1-207ENST00000488737 RAPGEF4Q8WZA2 1011 aa17.19■□□□□ 0.34
ABCB1-207ENST00000488737 PPP1R9BQ96SB3 815 aa17.19■□□□□ 0.34
ABCB1-207ENST00000488737 UPF3BQ9BZI7 483 aaKnown RBP17.19■□□□□ 0.34
ABCB1-207ENST00000488737 SNX14Q9Y5W7 946 aa17.19■□□□□ 0.34
ABCB1-207ENST00000488737 KDM6AO15550 1401 aaPredicted RBP17.19■□□□□ 0.34
ABCB1-207ENST00000488737 PDIA6Q15084 440 aa17.18■□□□□ 0.34
ABCB1-207ENST00000488737 SLC52A2Q9HAB3 445 aa17.18■□□□□ 0.34
ABCB1-207ENST00000488737 IFIT2P09913 472 aaKnown RBP17.18■□□□□ 0.34
ABCB1-207ENST00000488737 ZNF790Q6PG37 636 aa17.18■□□□□ 0.34
ABCB1-207ENST00000488737 GPT2Q8TD30 523 aa17.18■□□□□ 0.34
ABCB1-207ENST00000488737 ANP32BQ92688 251 aaKnown RBP17.18■□□□□ 0.34
ABCB1-207ENST00000488737 TTC14Q96N46 770 aa17.18■□□□□ 0.34
ABCB1-207ENST00000488737 DIAPH3Q9NSV4 1193 aa17.18■□□□□ 0.34
ABCB1-207ENST00000488737 NPHP3Q7Z494 1330 aa17.18■□□□□ 0.34
ABCB1-207ENST00000488737 PKD1L3Q7Z443 1732 aa17.17■□□□□ 0.34
ABCB1-207ENST00000488737 PRAMEF22A3QJZ6 481 aa17.17■□□□□ 0.34
ABCB1-207ENST00000488737 TATP17735 454 aaPredicted RBP17.17■□□□□ 0.34
ABCB1-207ENST00000488737 NCLP19338 710 aaKnown RBP17.17■□□□□ 0.34
ABCB1-207ENST00000488737 CWF19L2Q2TBE0 894 aaKnown RBP17.17■□□□□ 0.34
ABCB1-207ENST00000488737 LARP1Q6PKG0 1096 aaKnown RBP17.17■□□□□ 0.34
ABCB1-207ENST00000488737 EVI5LQ96CN4 794 aa17.17■□□□□ 0.34
ABCB1-207ENST00000488737 TRIM44Q96DX7 344 aaPredicted RBP17.17■□□□□ 0.34
ABCB1-207ENST00000488737 SPG7Q9UQ90 795 aa17.17■□□□□ 0.34
ABCB1-207ENST00000488737 WDR33Q9C0J8 1336 aaKnown RBP17.16■□□□□ 0.34
ABCB1-207ENST00000488737 SUCLG2Q96I99 432 aa17.16■□□□□ 0.34
ABCB1-207ENST00000488737 HIP1O00291 1037 aa17.16■□□□□ 0.34
ABCB1-207ENST00000488737 CWC27Q6UX04 472 aaKnown RBP17.16■□□□□ 0.34
ABCB1-207ENST00000488737 KCNB2Q92953 911 aa17.16■□□□□ 0.34
ABCB1-207ENST00000488737 PHKG2P15735 406 aa17.15■□□□□ 0.34
ABCB1-207ENST00000488737 KAZALD1Q96I82 304 aa17.15■□□□□ 0.34
ABCB1-207ENST00000488737 PARP4Q9UKK3 1724 aaKnown RBP17.14■□□□□ 0.34
ABCB1-207ENST00000488737 ESPNB1AK53 854 aa17.14■□□□□ 0.33
ABCB1-207ENST00000488737 NEXNQ0ZGT2 675 aa17.14■□□□□ 0.33
ABCB1-207ENST00000488737 G3BP1Q13283 466 aaKnown RBP eCLIP17.14■□□□□ 0.33
ABCB1-207ENST00000488737 TM6SF1Q9BZW5 370 aa17.14■□□□□ 0.33
ABCB1-207ENST00000488737 BICC1Q9H694 974 aaKnown RBP17.14■□□□□ 0.33
ABCB1-207ENST00000488737 PA2G4Q9UQ80 394 aaKnown RBP17.14■□□□□ 0.33
ABCB1-207ENST00000488737 MEGF6O75095 1541 aa17.14■□□□□ 0.33
ABCB1-207ENST00000488737 ZC3H6P61129 1189 aaKnown RBP17.14■□□□□ 0.33
ABCB1-207ENST00000488737 NOL8Q76FK4 1167 aaKnown RBP17.14■□□□□ 0.33
ABCB1-207ENST00000488737 RIC3Q7Z5B4 369 aa17.14■□□□□ 0.33
ABCB1-207ENST00000488737 AACSQ86V21 672 aa17.14■□□□□ 0.33
ABCB1-207ENST00000488737 IFNL2Q8IZJ0 200 aa17.14■□□□□ 0.33
ABCB1-207ENST00000488737 LIMCH1Q9UPQ0 1083 aa17.14■□□□□ 0.33
ABCB1-207ENST00000488737 LAMB4A4D0S4 1761 aa17.13■□□□□ 0.33
ABCB1-207ENST00000488737 IGKV5-2P06315 115 aa17.13■□□□□ 0.33
ABCB1-207ENST00000488737 ATF3P18847 181 aa17.13■□□□□ 0.33
ABCB1-207ENST00000488737 RASEFQ8IZ41 740 aa17.13■□□□□ 0.33
ABCB1-207ENST00000488737 NLRP2Q9NX02 1062 aa17.13■□□□□ 0.33
ABCB1-207ENST00000488737 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.13■□□□□ 0.33
ABCB1-207ENST00000488737 AFDNP55196 1824 aaKnown RBP17.13■□□□□ 0.33
ABCB1-207ENST00000488737 COL15A1P39059 1388 aa17.13■□□□□ 0.33
ABCB1-207ENST00000488737 SASH1O94885 1247 aa17.12■□□□□ 0.33
ABCB1-207ENST00000488737 AK2P54819 239 aa17.12■□□□□ 0.33
ABCB1-207ENST00000488737 LRSAM1Q6UWE0 723 aa17.12■□□□□ 0.33
ABCB1-207ENST00000488737 METTL22Q9BUU2 404 aaPredicted RBP17.12■□□□□ 0.33
ABCB1-207ENST00000488737 SNRKQ9NRH2 765 aa17.12■□□□□ 0.33
ABCB1-207ENST00000488737 NEURL1BA8MQ27 555 aa17.12■□□□□ 0.33
ABCB1-207ENST00000488737 AIMP1Q12904 312 aaKnown RBP17.12■□□□□ 0.33
ABCB1-207ENST00000488737 TMEM63CQ9P1W3 806 aa17.12■□□□□ 0.33
ABCB1-207ENST00000488737 TNS3Q68CZ2 1445 aa17.11■□□□□ 0.33
ABCB1-207ENST00000488737 RPAP1Q9BWH6 1393 aaPredicted RBP17.11■□□□□ 0.33
ABCB1-207ENST00000488737 LTBP4Q8N2S1 1624 aa17.11■□□□□ 0.33
ABCB1-207ENST00000488737 ARFGEF2Q9Y6D5 1785 aa17.11■□□□□ 0.33
ABCB1-207ENST00000488737 GCKRQ14397 625 aa17.11■□□□□ 0.33
ABCB1-207ENST00000488737 VPS53Q5VIR6 699 aa17.11■□□□□ 0.33
ABCB1-207ENST00000488737 FOXD4L5Q5VV16 416 aaPredicted RBP17.11■□□□□ 0.33
ABCB1-207ENST00000488737 TMEM87AQ8NBN3 555 aa17.11■□□□□ 0.33
ABCB1-207ENST00000488737 FOXD4L4Q8WXT5 416 aaPredicted RBP17.11■□□□□ 0.33
ABCB1-207ENST00000488737 SYAP1Q96A49 352 aaPredicted RBP17.11■□□□□ 0.33
ABCB1-207ENST00000488737 DCAF5Q96JK2 942 aa17.11■□□□□ 0.33
ABCB1-207ENST00000488737 TCHHQ07283 1943 aa17.11■□□□□ 0.33
ABCB1-207ENST00000488737 CCDC171Q6TFL3 1326 aa17.1■□□□□ 0.33
ABCB1-207ENST00000488737 SLC39A6Q13433 755 aa17.1■□□□□ 0.33
ABCB1-207ENST00000488737 RUFY3Q7L099 469 aa17.1■□□□□ 0.33
ABCB1-207ENST00000488737 EAF2Q96CJ1 260 aaPredicted RBP17.1■□□□□ 0.33
ABCB1-207ENST00000488737 ZSCAN31Q96LW9 406 aaPredicted RBP17.1■□□□□ 0.33
ABCB1-207ENST00000488737 RBM27Q9P2N5 1060 aaKnown RBP17.1■□□□□ 0.33
ABCB1-207ENST00000488737 SNRPA1P09661 255 aaKnown RBP17.1■□□□□ 0.33
ABCB1-207ENST00000488737 PRIM1P49642 420 aaKnown RBP17.1■□□□□ 0.33
ABCB1-207ENST00000488737 NFATC2IPQ8NCF5 419 aa17.1■□□□□ 0.33
ABCB1-207ENST00000488737 XAGE3Q8WTP9 111 aa17.1■□□□□ 0.33
ABCB1-207ENST00000488737 ZSWIM6Q9HCJ5 1215 aa17.1■□□□□ 0.33
ABCB1-207ENST00000488737 SH2B1Q9NRF2 756 aaPredicted RBP17.1■□□□□ 0.33
ABCB1-207ENST00000488737 CASTP20810 708 aaKnown RBP17.09■□□□□ 0.33
ABCB1-207ENST00000488737 PTH1RQ03431 593 aa17.09■□□□□ 0.33
ABCB1-207ENST00000488737 NECTIN1Q15223 517 aa17.09■□□□□ 0.33
ABCB1-207ENST00000488737 HS1BP3Q53T59 392 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms