RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 C19orf44Q9H6X5 657 aa17.04■□□□□ 0.32
RER1-207ENST00000488353 LGR6Q9HBX8 967 aa17.04■□□□□ 0.32
RER1-207ENST00000488353 TCHHQ07283 1943 aa17.03■□□□□ 0.32
RER1-207ENST00000488353 U2AF2P26368 475 aaKnown RBP eCLIP17.03■□□□□ 0.32
RER1-207ENST00000488353 CCDC30Q5VVM6 783 aa17.03■□□□□ 0.32
RER1-207ENST00000488353 C1orf167Q5SNV9 1468 aa17.03■□□□□ 0.32
RER1-207ENST00000488353 ANAPC15P60006 121 aa17.03■□□□□ 0.32
RER1-207ENST00000488353 BBXQ8WY36 941 aaPredicted RBP17.03■□□□□ 0.32
RER1-207ENST00000488353 ESYT1Q9BSJ8 1104 aa17.03■□□□□ 0.32
RER1-207ENST00000488353 PALD1Q9ULE6 856 aa17.03■□□□□ 0.32
RER1-207ENST00000488353 LRRFIP2Q9Y608 721 aaKnown RBP17.03■□□□□ 0.32
RER1-207ENST00000488353 HSPA2P54652 639 aa17.02■□□□□ 0.32
RER1-207ENST00000488353 ANO2Q9NQ90 1003 aa17.02■□□□□ 0.32
RER1-207ENST00000488353 AXIN2Q9Y2T1 843 aa17.02■□□□□ 0.32
RER1-207ENST00000488353 GNAI3P08754 354 aa17.02■□□□□ 0.31
RER1-207ENST00000488353 ATP8B2P98198 1209 aa17.02■□□□□ 0.31
RER1-207ENST00000488353 FOXD4L6Q3SYB3 417 aaPredicted RBP17.02■□□□□ 0.31
RER1-207ENST00000488353 FOXD4L3Q6VB84 417 aaPredicted RBP17.02■□□□□ 0.31
RER1-207ENST00000488353 OGFRQ9NZT2 677 aa17.02■□□□□ 0.31
RER1-207ENST00000488353 IL1RAPL2Q9NP60 686 aa17.01■□□□□ 0.31
RER1-207ENST00000488353 ZC3H6P61129 1189 aaKnown RBP17.01■□□□□ 0.31
RER1-207ENST00000488353 UNC5CLQ8IV45 518 aa17.01■□□□□ 0.31
RER1-207ENST00000488353 ANKRD24Q8TF21 1146 aa17.01■□□□□ 0.31
RER1-207ENST00000488353 SALL3Q9BXA9 1300 aa17■□□□□ 0.31
RER1-207ENST00000488353 TMEM94Q12767 1356 aa17■□□□□ 0.31
RER1-207ENST00000488353 ZNF530Q6P9A1 599 aaPredicted RBP17■□□□□ 0.31
RER1-207ENST00000488353 GOLGA6L6A8MZA4 724 aa16.99■□□□□ 0.31
RER1-207ENST00000488353 CHMLP26374 656 aa16.99■□□□□ 0.31
RER1-207ENST00000488353 MPRIPQ6WCQ1 1025 aa16.99■□□□□ 0.31
RER1-207ENST00000488353 MAP4K4O95819 1239 aaPredicted RBP16.99■□□□□ 0.31
RER1-207ENST00000488353 ATF3P18847 181 aa16.99■□□□□ 0.31
RER1-207ENST00000488353 UBE2HP62256 183 aa16.98■□□□□ 0.31
RER1-207ENST00000488353 PLCB2Q00722 1185 aa16.98■□□□□ 0.31
RER1-207ENST00000488353 NUTM1Q86Y26 1132 aa16.98■□□□□ 0.31
RER1-207ENST00000488353 PHAXQ9H814 394 aaKnown RBP16.98■□□□□ 0.31
RER1-207ENST00000488353 KCNQ3O43525 872 aa16.98■□□□□ 0.31
RER1-207ENST00000488353 SYCP1Q15431 976 aa16.98■□□□□ 0.31
RER1-207ENST00000488353 ZNF771Q7L3S4 317 aaPredicted RBP16.98■□□□□ 0.31
RER1-207ENST00000488353 USP44Q9H0E7 712 aa16.98■□□□□ 0.31
RER1-207ENST00000488353 KCNF1Q9H3M0 494 aa16.98■□□□□ 0.31
RER1-207ENST00000488353 PYCARDQ9ULZ3 195 aa16.98■□□□□ 0.31
RER1-207ENST00000488353 SLIT3O75094 1523 aa16.98■□□□□ 0.31
RER1-207ENST00000488353 CEMIPQ8WUJ3 1361 aa16.98■□□□□ 0.31
RER1-207ENST00000488353 EIF2S2P20042 333 aaKnown RBP16.97■□□□□ 0.31
RER1-207ENST00000488353 GTF2E1P29083 439 aaPredicted RBP16.97■□□□□ 0.31
RER1-207ENST00000488353 GABPB1Q06547 395 aaPredicted RBP16.97■□□□□ 0.31
RER1-207ENST00000488353 UPF3BQ9BZI7 483 aaKnown RBP16.97■□□□□ 0.31
RER1-207ENST00000488353 TRPM3Q9HCF6 1732 aaPredicted RBP16.97■□□□□ 0.31
RER1-207ENST00000488353 HDGFL1Q5TGJ6 251 aa16.97■□□□□ 0.31
RER1-207ENST00000488353 SRCIN1Q9C0H9 1055 aa16.97■□□□□ 0.31
RER1-207ENST00000488353 UBTFL1P0CB47 393 aaPredicted RBP16.96■□□□□ 0.31
RER1-207ENST00000488353 IL17RAQ96F46 866 aa16.96■□□□□ 0.31
RER1-207ENST00000488353 PXDNQ92626 1479 aa16.96■□□□□ 0.31
RER1-207ENST00000488353 FAM208AQ9UK61 1670 aaKnown RBP16.96■□□□□ 0.31
RER1-207ENST00000488353 IGSF3O75054 1194 aa16.96■□□□□ 0.31
RER1-207ENST00000488353 IL25Q9H293 177 aa16.96■□□□□ 0.31
RER1-207ENST00000488353 RPAP1Q9BWH6 1393 aaPredicted RBP16.96■□□□□ 0.31
RER1-207ENST00000488353 TUBGCP6Q96RT7 1819 aa16.95■□□□□ 0.3
RER1-207ENST00000488353 PLEKHO1Q53GL0 409 aaPredicted RBP16.95■□□□□ 0.3
RER1-207ENST00000488353 FUCA2Q9BTY2 467 aa16.95■□□□□ 0.3
RER1-207ENST00000488353 PHRF1Q9P1Y6 1649 aaKnown RBP16.95■□□□□ 0.3
RER1-207ENST00000488353 STRCP1A6NGW2 1772 aa16.95■□□□□ 0.3
RER1-207ENST00000488353 TEFQ10587 303 aa16.95■□□□□ 0.3
RER1-207ENST00000488353 AKAP4Q5JQC9 854 aa16.95■□□□□ 0.3
RER1-207ENST00000488353 CABLES1Q8TDN4 633 aa16.95■□□□□ 0.3
RER1-207ENST00000488353 CNPY2Q9Y2B0 182 aa16.95■□□□□ 0.3
RER1-207ENST00000488353 MST1RQ04912 1400 aa16.95■□□□□ 0.3
RER1-207ENST00000488353 SURF6O75683 361 aaKnown RBP16.94■□□□□ 0.3
RER1-207ENST00000488353 EIF4A1P60842 406 aaKnown RBP16.94■□□□□ 0.3
RER1-207ENST00000488353 NCBP1Q09161 790 aaKnown RBP16.94■□□□□ 0.3
RER1-207ENST00000488353 BABAM1Q9NWV8 329 aa16.94■□□□□ 0.3
RER1-207ENST00000488353 CTNNA3Q9UI47 895 aa16.94■□□□□ 0.3
RER1-207ENST00000488353 BTBD11A6QL63 1104 aa16.93■□□□□ 0.3
RER1-207ENST00000488353 PPP1R42Q7Z4L9 355 aa16.93■□□□□ 0.3
RER1-207ENST00000488353 TMEM51Q9NW97 253 aa16.93■□□□□ 0.3
RER1-207ENST00000488353 CGNQ9P2M7 1197 aaKnown RBP16.93■□□□□ 0.3
RER1-207ENST00000488353 STAP2Q9UGK3 403 aa16.93■□□□□ 0.3
RER1-207ENST00000488353 ATP6V1DQ9Y5K8 247 aa16.93■□□□□ 0.3
RER1-207ENST00000488353 CACNA1FO60840 1977 aa16.93■□□□□ 0.3
RER1-207ENST00000488353 AP5Z1O43299 807 aa16.93■□□□□ 0.3
RER1-207ENST00000488353 ZSCAN22P10073 491 aaPredicted RBP16.93■□□□□ 0.3
RER1-207ENST00000488353 C1orf141Q5JVX7 400 aa16.93■□□□□ 0.3
RER1-207ENST00000488353 KIF1AQ12756 1690 aa16.92■□□□□ 0.3
RER1-207ENST00000488353 ANXA1P04083 346 aa16.92■□□□□ 0.3
RER1-207ENST00000488353 SPC24Q8NBT2 197 aa16.92■□□□□ 0.3
RER1-207ENST00000488353 RGPD5Q99666 1765 aa16.92■□□□□ 0.3
RER1-207ENST00000488353 MED1Q15648 1581 aaPredicted RBP16.92■□□□□ 0.3
RER1-207ENST00000488353 ERBB3P21860 1342 aa16.92■□□□□ 0.3
RER1-207ENST00000488353 KDM4FA0A1W2PPD8 638 aa16.92■□□□□ 0.3
RER1-207ENST00000488353 AMOTQ4VCS5 1084 aa16.92■□□□□ 0.3
RER1-207ENST00000488353 GIMAP6Q6P9H5 292 aa16.92■□□□□ 0.3
RER1-207ENST00000488353 SMTNL1A8MU46 457 aa16.91■□□□□ 0.3
RER1-207ENST00000488353 RNMTO43148 476 aaKnown RBP16.91■□□□□ 0.3
RER1-207ENST00000488353 CHPF2Q9P2E5 772 aa16.91■□□□□ 0.3
RER1-207ENST00000488353 DDX41Q9UJV9 622 aaKnown RBP16.91■□□□□ 0.3
RER1-207ENST00000488353 EPB41L2O43491 1005 aaKnown RBP16.91■□□□□ 0.3
RER1-207ENST00000488353 TPRNQ4KMQ1 711 aa16.91■□□□□ 0.3
RER1-207ENST00000488353 SSH3Q8TE77 659 aa16.9■□□□□ 0.3
RER1-207ENST00000488353 LARP6Q9BRS8 491 aaKnown RBP16.9■□□□□ 0.3
RER1-207ENST00000488353 NLRP2Q9NX02 1062 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms