RNA–Protein interactions for RNA: ENST00000486255.1

GABRE-209, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 1 (best)

Gene GABRE, Length 6,176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-209ENST00000486255 GOLGA6L9A6NEM1 432 aa10.14□□□□□ -0.79
GABRE-209ENST00000486255 NOL3O60936 208 aaKnown RBP10.14□□□□□ -0.79
GABRE-209ENST00000486255 TRIM21P19474 475 aaKnown RBP10.14□□□□□ -0.79
GABRE-209ENST00000486255 CNNM1Q9NRU3 951 aa10.14□□□□□ -0.79
GABRE-209ENST00000486255 GNL3LQ9NVN8 582 aaKnown RBP10.14□□□□□ -0.79
GABRE-209ENST00000486255 CASTP20810 708 aaKnown RBP10.14□□□□□ -0.79
GABRE-209ENST00000486255 EXOSC9Q06265 439 aaKnown RBP10.14□□□□□ -0.79
GABRE-209ENST00000486255 DDX46Q7L014 1031 aaKnown RBP10.14□□□□□ -0.79
GABRE-209ENST00000486255 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.14□□□□□ -0.79
GABRE-209ENST00000486255 USP25Q9UHP3 1055 aa10.14□□□□□ -0.79
GABRE-209ENST00000486255 V9GYY5 206 aaPredicted RBP10.14□□□□□ -0.79
GABRE-209ENST00000486255 FSD2A1L4K1 749 aa10.14□□□□□ -0.79
GABRE-209ENST00000486255 ADCY5O95622 1261 aa10.14□□□□□ -0.79
GABRE-209ENST00000486255 LIG1P18858 919 aa10.14□□□□□ -0.79
GABRE-209ENST00000486255 GRIPAP1Q4V328 841 aa10.14□□□□□ -0.79
GABRE-209ENST00000486255 MXRA7P84157 204 aa10.13□□□□□ -0.79
GABRE-209ENST00000486255 HYPKQ9NX55 129 aa10.13□□□□□ -0.79
GABRE-209ENST00000486255 ERCC6L2Q5T890 1561 aa10.13□□□□□ -0.79
GABRE-209ENST00000486255 PLEKHH1Q9ULM0 1364 aa10.13□□□□□ -0.79
GABRE-209ENST00000486255 CTAGE5O15320 804 aa10.13□□□□□ -0.79
GABRE-209ENST00000486255 FGFR1OPO95684 399 aaKnown RBP10.13□□□□□ -0.79
GABRE-209ENST00000486255 KRT32Q14532 448 aa10.13□□□□□ -0.79
GABRE-209ENST00000486255 KLHL10Q6JEL2 608 aa10.13□□□□□ -0.79
GABRE-209ENST00000486255 CPLX3Q8WVH0 158 aa10.13□□□□□ -0.79
GABRE-209ENST00000486255 ZNF76P36508 570 aa10.13□□□□□ -0.79
GABRE-209ENST00000486255 CWC27Q6UX04 472 aaKnown RBP10.13□□□□□ -0.79
GABRE-209ENST00000486255 CEP83Q9Y592 693 aa10.13□□□□□ -0.79
GABRE-209ENST00000486255 ZWINTO95229 277 aa10.13□□□□□ -0.79
GABRE-209ENST00000486255 CCT4P50991 539 aaKnown RBP10.13□□□□□ -0.79
GABRE-209ENST00000486255 DNAI2Q9GZS0 605 aa10.13□□□□□ -0.79
GABRE-209ENST00000486255 A0A1W2PRG0 241 aa10.12□□□□□ -0.79
GABRE-209ENST00000486255 BCAR3O75815 825 aa10.12□□□□□ -0.79
GABRE-209ENST00000486255 TWISTNBQ3B726 338 aaPredicted RBP10.12□□□□□ -0.79
GABRE-209ENST00000486255 CCDC155Q8N6L0 562 aa10.12□□□□□ -0.79
GABRE-209ENST00000486255 CCDC171Q6TFL3 1326 aa10.12□□□□□ -0.79
GABRE-209ENST00000486255 CCDC121Q6ZUS5 278 aa10.12□□□□□ -0.79
GABRE-209ENST00000486255 CCDC150Q8NCX0 1101 aa10.12□□□□□ -0.79
GABRE-209ENST00000486255 TSNARE1Q96NA8 513 aa10.12□□□□□ -0.79
GABRE-209ENST00000486255 SCLT1Q96NL6 688 aa10.12□□□□□ -0.79
GABRE-209ENST00000486255 CEP57Q86XR8 500 aa10.12□□□□□ -0.79
GABRE-209ENST00000486255 FAM114A1Q8IWE2 563 aa10.12□□□□□ -0.79
GABRE-209ENST00000486255 SMG6Q86US8 1419 aaKnown RBP10.11□□□□□ -0.79
GABRE-209ENST00000486255 KIF4AO95239 1232 aa10.11□□□□□ -0.79
GABRE-209ENST00000486255 STX1AQ16623 288 aa10.11□□□□□ -0.79
GABRE-209ENST00000486255 TDRD12Q587J7 1177 aaKnown RBP10.11□□□□□ -0.79
GABRE-209ENST00000486255 ANKS4BQ8N8V4 417 aa10.11□□□□□ -0.79
GABRE-209ENST00000486255 RSRC1Q96IZ7 334 aaKnown RBP10.11□□□□□ -0.79
GABRE-209ENST00000486255 KDM6BO15054 1643 aa10.11□□□□□ -0.79
GABRE-209ENST00000486255 MPHOSPH10O00566 681 aaKnown RBP10.11□□□□□ -0.79
GABRE-209ENST00000486255 SIL1Q9H173 461 aa10.11□□□□□ -0.79
GABRE-209ENST00000486255 CTNNA3Q9UI47 895 aa10.11□□□□□ -0.79
GABRE-209ENST00000486255 SETSIPP0DME0 302 aa10.11□□□□□ -0.79
GABRE-209ENST00000486255 CKAP4Q07065 602 aaKnown RBP10.11□□□□□ -0.79
GABRE-209ENST00000486255 PPP1R14CQ8TAE6 165 aa10.11□□□□□ -0.79
GABRE-209ENST00000486255 CCDC12Q8WUD4 166 aaPredicted RBP10.11□□□□□ -0.79
GABRE-209ENST00000486255 CTNNA2P26232 953 aa10.11□□□□□ -0.79
GABRE-209ENST00000486255 KIF5BP33176 963 aa10.11□□□□□ -0.79
GABRE-209ENST00000486255 MVPQ14764 893 aaKnown RBP10.11□□□□□ -0.79
GABRE-209ENST00000486255 UVSSAQ2YD98 709 aa10.11□□□□□ -0.79
GABRE-209ENST00000486255 UBAC1Q9BSL1 405 aa10.11□□□□□ -0.79
GABRE-209ENST00000486255 ADAMTS2O95450 1211 aa10.11□□□□□ -0.79
GABRE-209ENST00000486255 RAPGEF4Q8WZA2 1011 aa10.11□□□□□ -0.79
GABRE-209ENST00000486255 OPA1O60313 960 aa10.1□□□□□ -0.79
GABRE-209ENST00000486255 AACSQ86V21 672 aa10.1□□□□□ -0.79
GABRE-209ENST00000486255 GBP6Q6ZN66 633 aa10.1□□□□□ -0.79
GABRE-209ENST00000486255 APBB1IPQ7Z5R6 666 aaPredicted RBP10.1□□□□□ -0.79
GABRE-209ENST00000486255 PIBF1Q8WXW3 757 aa10.1□□□□□ -0.79
GABRE-209ENST00000486255 JADE2Q9NQC1 790 aa10.1□□□□□ -0.79
GABRE-209ENST00000486255 PAIP2Q9BPZ3 127 aaKnown RBP10.1□□□□□ -0.79
GABRE-209ENST00000486255 ATAD2Q6PL18 1390 aa10.1□□□□□ -0.79
GABRE-209ENST00000486255 CCDC94Q9BW85 323 aaPredicted RBP10.1□□□□□ -0.79
GABRE-209ENST00000486255 NOS1P29475 1434 aa10.1□□□□□ -0.79
GABRE-209ENST00000486255 SARNPP82979 210 aaKnown RBP10.09□□□□□ -0.79
GABRE-209ENST00000486255 ESCO1Q5FWF5 840 aa10.09□□□□□ -0.79
GABRE-209ENST00000486255 DDX12PQ92771 950 aa10.09□□□□□ -0.79
GABRE-209ENST00000486255 MACROD2A1Z1Q3 448 aa10.09□□□□□ -0.79
GABRE-209ENST00000486255 GRM1Q13255 1194 aa10.09□□□□□ -0.79
GABRE-209ENST00000486255 PRPF4BQ13523 1007 aaKnown RBP10.09□□□□□ -0.79
GABRE-209ENST00000486255 TCP11L2Q8N4U5 519 aa10.09□□□□□ -0.79
GABRE-209ENST00000486255 SCAND2PQ9GZW5 306 aaPredicted RBP10.09□□□□□ -0.79
GABRE-209ENST00000486255 FAM177BA6PVY3 158 aa10.09□□□□□ -0.79
GABRE-209ENST00000486255 SSFA2P28290 1259 aa10.09□□□□□ -0.79
GABRE-209ENST00000486255 SREK1Q8WXA9 508 aaKnown RBP10.09□□□□□ -0.79
GABRE-209ENST00000486255 ANAPC4Q9UJX5 808 aa10.09□□□□□ -0.79
GABRE-209ENST00000486255 TMEM132EQ6IEE7 984 aa10.09□□□□□ -0.79
GABRE-209ENST00000486255 PHAXQ9H814 394 aaKnown RBP10.09□□□□□ -0.79
GABRE-209ENST00000486255 COMMD10Q9Y6G5 202 aa10.09□□□□□ -0.79
GABRE-209ENST00000486255 CCDC129Q6ZRS4 1044 aa10.09□□□□□ -0.79
GABRE-209ENST00000486255 CKAP2LQ8IYA6 745 aa10.09□□□□□ -0.79
GABRE-209ENST00000486255 GAS2L2Q8NHY3 880 aa10.09□□□□□ -0.79
GABRE-209ENST00000486255 TNPO1Q92973 898 aaKnown RBP10.09□□□□□ -0.79
GABRE-209ENST00000486255 KIF3CO14782 793 aa10.08□□□□□ -0.8
GABRE-209ENST00000486255 NAA25Q14CX7 972 aa10.08□□□□□ -0.8
GABRE-209ENST00000486255 OTUD6BQ8N6M0 293 aa10.08□□□□□ -0.8
GABRE-209ENST00000486255 FERMT2Q96AC1 680 aa10.08□□□□□ -0.8
GABRE-209ENST00000486255 ZSWIM4Q9H7M6 989 aa10.08□□□□□ -0.8
GABRE-209ENST00000486255 PLCD3Q8N3E9 789 aa10.08□□□□□ -0.8
GABRE-209ENST00000486255 EHBP1Q8NDI1 1231 aa10.08□□□□□ -0.8
GABRE-209ENST00000486255 IKBKGQ9Y6K9 419 aa10.08□□□□□ -0.8
GABRE-209ENST00000486255 ATP10AO60312 1499 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms