RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 ZNF784Q8NCA9 323 aaPredicted RBP16.05■□□□□ 0.16
MSH5-216ENST00000484309 SETDB2Q96T68 719 aa16.05■□□□□ 0.16
MSH5-216ENST00000484309 BABAM1Q9NWV8 329 aa16.05■□□□□ 0.16
MSH5-216ENST00000484309 SBF1O95248 1867 aa16.04■□□□□ 0.16
MSH5-216ENST00000484309 FAM177BA6PVY3 158 aa16.04■□□□□ 0.16
MSH5-216ENST00000484309 NPHP1O15259 732 aa16.04■□□□□ 0.16
MSH5-216ENST00000484309 HLFQ16534 295 aa16.04■□□□□ 0.16
MSH5-216ENST00000484309 TTLL7Q6ZT98 887 aa16.04■□□□□ 0.16
MSH5-216ENST00000484309 PIM2Q9P1W9 311 aa16.04■□□□□ 0.16
MSH5-216ENST00000484309 ZNF652Q9Y2D9 606 aa16.04■□□□□ 0.16
MSH5-216ENST00000484309 PROSER3Q2NL68 480 aa16.03■□□□□ 0.16
MSH5-216ENST00000484309 C2CD5Q86YS7 1000 aa16.03■□□□□ 0.16
MSH5-216ENST00000484309 CNBD1Q8NA66 436 aa16.03■□□□□ 0.16
MSH5-216ENST00000484309 ZBTB3Q9H5J0 574 aa16.03■□□□□ 0.16
MSH5-216ENST00000484309 ARFGEF2Q9Y6D5 1785 aa16.03■□□□□ 0.16
MSH5-216ENST00000484309 TNRC6CQ9HCJ0 1690 aaKnown RBP16.02■□□□□ 0.16
MSH5-216ENST00000484309 DALRD3Q5D0E6 543 aaKnown RBP16.02■□□□□ 0.16
MSH5-216ENST00000484309 CLEC4GQ6UXB4 293 aa16.02■□□□□ 0.16
MSH5-216ENST00000484309 KIF6Q6ZMV9 814 aa16.02■□□□□ 0.16
MSH5-216ENST00000484309 ARHGAP27Q6ZUM4 889 aa16.02■□□□□ 0.16
MSH5-216ENST00000484309 MBIPQ9NS73 344 aa16.02■□□□□ 0.16
MSH5-216ENST00000484309 NIP7Q9Y221 180 aaKnown RBP eCLIP16.02■□□□□ 0.16
MSH5-216ENST00000484309 SLX4Q8IY92 1834 aa16.01■□□□□ 0.15
MSH5-216ENST00000484309 ERBB4Q15303 1308 aa16.01■□□□□ 0.15
MSH5-216ENST00000484309 MAP3K15Q6ZN16 1313 aa16.01■□□□□ 0.15
MSH5-216ENST00000484309 PDIA6Q15084 440 aa16.01■□□□□ 0.15
MSH5-216ENST00000484309 NBPF5PQ86XG9 351 aaPredicted RBP16.01■□□□□ 0.15
MSH5-216ENST00000484309 CFAP44Q96MT7 982 aa16.01■□□□□ 0.15
MSH5-216ENST00000484309 ST5P78524 1137 aa16■□□□□ 0.15
MSH5-216ENST00000484309 ATP10DQ9P241 1426 aa16■□□□□ 0.15
MSH5-216ENST00000484309 H0YIN7 160 aa15.99■□□□□ 0.15
MSH5-216ENST00000484309 GPTP24298 496 aa15.99■□□□□ 0.15
MSH5-216ENST00000484309 LRP10Q7Z4F1 713 aa15.99■□□□□ 0.15
MSH5-216ENST00000484309 ZNF622Q969S3 477 aaKnown RBP eCLIP15.99■□□□□ 0.152e-11■□□□□ 9
MSH5-216ENST00000484309 BRIP1Q9BX63 1249 aa15.99■□□□□ 0.15
MSH5-216ENST00000484309 ZNF853P0CG23 659 aa15.98■□□□□ 0.15
MSH5-216ENST00000484309 PDE6BP35913 854 aa15.98■□□□□ 0.15
MSH5-216ENST00000484309 GNAI1P63096 354 aa15.98■□□□□ 0.15
MSH5-216ENST00000484309 AIMP1Q12904 312 aaKnown RBP15.98■□□□□ 0.15
MSH5-216ENST00000484309 HDGFL1Q5TGJ6 251 aa15.98■□□□□ 0.15
MSH5-216ENST00000484309 IFT57Q9NWB7 429 aa15.98■□□□□ 0.15
MSH5-216ENST00000484309 CHPF2Q9P2E5 772 aa15.98■□□□□ 0.15
MSH5-216ENST00000484309 SALL2Q9Y467 1007 aaPredicted RBP15.98■□□□□ 0.15
MSH5-216ENST00000484309 ADCY9O60503 1353 aa15.98■□□□□ 0.15
MSH5-216ENST00000484309 FER1L6Q2WGJ9 1857 aa15.97■□□□□ 0.15
MSH5-216ENST00000484309 ERVV-1B6SEH8 477 aa15.97■□□□□ 0.15
MSH5-216ENST00000484309 ELL2O00472 640 aaPredicted RBP15.97■□□□□ 0.15
MSH5-216ENST00000484309 DUSP27Q5VZP5 1158 aa15.97■□□□□ 0.15
MSH5-216ENST00000484309 FAM9BQ8IZU0 186 aa15.97■□□□□ 0.15
MSH5-216ENST00000484309 ZNF526Q8TF50 670 aaPredicted RBP15.97■□□□□ 0.15
MSH5-216ENST00000484309 XAGE3Q8WTP9 111 aa15.97■□□□□ 0.15
MSH5-216ENST00000484309 ZNF219Q9P2Y4 722 aaPredicted RBP15.97■□□□□ 0.15
MSH5-216ENST00000484309 LAMB2P55268 1798 aa15.97■□□□□ 0.15
MSH5-216ENST00000484309 TIAM2Q8IVF5 1701 aa15.97■□□□□ 0.15
MSH5-216ENST00000484309 UBN2Q6ZU65 1347 aa15.96■□□□□ 0.15
MSH5-216ENST00000484309 RGL2O15211 777 aa15.96■□□□□ 0.15
MSH5-216ENST00000484309 CALD1Q05682 793 aaKnown RBP15.96■□□□□ 0.15
MSH5-216ENST00000484309 COPS6Q7L5N1 327 aa15.96■□□□□ 0.15
MSH5-216ENST00000484309 NUTM1Q86Y26 1132 aa15.96■□□□□ 0.15
MSH5-216ENST00000484309 TTLL6Q8N841 843 aa15.96■□□□□ 0.15
MSH5-216ENST00000484309 ABCC12Q96J65 1359 aa15.96■□□□□ 0.15
MSH5-216ENST00000484309 GTF2E1P29083 439 aaPredicted RBP15.95■□□□□ 0.14
MSH5-216ENST00000484309 RASSF7Q02833 373 aa15.95■□□□□ 0.14
MSH5-216ENST00000484309 TPTE2Q6XPS3 522 aa15.95■□□□□ 0.14
MSH5-216ENST00000484309 GIGYF2Q6Y7W6 1299 aaKnown RBP15.95■□□□□ 0.14
MSH5-216ENST00000484309 TSR2Q969E8 191 aaKnown RBP15.95■□□□□ 0.14
MSH5-216ENST00000484309 DDX21Q9NR30 783 aaKnown RBP eCLIP15.95■□□□□ 0.14
MSH5-216ENST00000484309 DICER1Q9UPY3 1922 aaKnown RBP15.94■□□□□ 0.14
MSH5-216ENST00000484309 WWC1Q8IX03 1113 aa15.94■□□□□ 0.14
MSH5-216ENST00000484309 HOXB7P09629 217 aa15.93■□□□□ 0.14
MSH5-216ENST00000484309 ERFEQ4G0M1 354 aa15.93■□□□□ 0.14
MSH5-216ENST00000484309 SUSD4Q5VX71 490 aa15.93■□□□□ 0.14
MSH5-216ENST00000484309 ZNF34Q8IZ26 560 aa15.93■□□□□ 0.14
MSH5-216ENST00000484309 C8orf58Q8NAV2 365 aa15.93■□□□□ 0.14
MSH5-216ENST00000484309 ZNF428Q96B54 188 aa15.93■□□□□ 0.14
MSH5-216ENST00000484309 C21orf2O43822 256 aa15.92■□□□□ 0.14
MSH5-216ENST00000484309 SRGNP10124 158 aa15.92■□□□□ 0.14
MSH5-216ENST00000484309 CCDC27Q2M243 656 aa15.92■□□□□ 0.14
MSH5-216ENST00000484309 C9orf131Q5VYM1 1079 aa15.92■□□□□ 0.14
MSH5-216ENST00000484309 NYXQ9GZU5 481 aa15.92■□□□□ 0.14
MSH5-216ENST00000484309 PDZRN3Q9UPQ7 1066 aa15.92■□□□□ 0.14
MSH5-216ENST00000484309 TAF1P21675 1872 aa15.91■□□□□ 0.14
MSH5-216ENST00000484309 STYK1Q6J9G0 422 aa15.91■□□□□ 0.14
MSH5-216ENST00000484309 TSPYL6Q8N831 410 aa15.91■□□□□ 0.14
MSH5-216ENST00000484309 MASTLQ96GX5 879 aa15.91■□□□□ 0.14
MSH5-216ENST00000484309 RNF181Q9P0P0 153 aa15.91■□□□□ 0.14
MSH5-216ENST00000484309 DBF4Q9UBU7 674 aaPredicted RBP15.91■□□□□ 0.14
MSH5-216ENST00000484309 DDX60Q8IY21 1712 aaKnown RBP15.91■□□□□ 0.14
MSH5-216ENST00000484309 IBTKQ9P2D0 1353 aaPredicted RBP15.9■□□□□ 0.14
MSH5-216ENST00000484309 NTSR2O95665 410 aa15.9■□□□□ 0.14
MSH5-216ENST00000484309 PRPF40BQ6NWY9 871 aaKnown RBP15.9■□□□□ 0.14
MSH5-216ENST00000484309 CNKSR1Q969H4 720 aa15.9■□□□□ 0.14
MSH5-216ENST00000484309 GPBP1L1Q9HC44 474 aaPredicted RBP15.9■□□□□ 0.14
MSH5-216ENST00000484309 TCERG1O14776 1098 aaKnown RBP15.89■□□□□ 0.13
MSH5-216ENST00000484309 NPR1P16066 1061 aa15.89■□□□□ 0.13
MSH5-216ENST00000484309 PRELPP51888 382 aa15.89■□□□□ 0.13
MSH5-216ENST00000484309 PHAXQ9H814 394 aaKnown RBP15.89■□□□□ 0.13
MSH5-216ENST00000484309 CACNA1FO60840 1977 aa15.89■□□□□ 0.13
MSH5-216ENST00000484309 NFKBIEO00221 500 aa15.88■□□□□ 0.13
MSH5-216ENST00000484309 PARP10Q53GL7 1025 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms