RNA–Protein interactions for RNA: ENST00000484088.5

ITGB1-213, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-213ENST00000484088 STARD13Q9Y3M8 1113 aa4.48□□□□□ -1.69
ITGB1-213ENST00000484088 KRBA1A5PL33 1030 aa4.47□□□□□ -1.69
ITGB1-213ENST00000484088 TMEM88BA6NKF7 163 aa4.47□□□□□ -1.69
ITGB1-213ENST00000484088 PPP1R15AO75807 674 aaPredicted RBP4.47□□□□□ -1.69
ITGB1-213ENST00000484088 PROCP04070 461 aa4.47□□□□□ -1.69
ITGB1-213ENST00000484088 LMOD1P29536 600 aaPredicted RBP4.47□□□□□ -1.69
ITGB1-213ENST00000484088 MAP2K3P46734 347 aa4.47□□□□□ -1.69
ITGB1-213ENST00000484088 DGKGP49619 791 aa4.47□□□□□ -1.69
ITGB1-213ENST00000484088 DPYDQ12882 1025 aa4.47□□□□□ -1.69
ITGB1-213ENST00000484088 FAM26DQ5JW98 314 aa4.47□□□□□ -1.69
ITGB1-213ENST00000484088 LRRC69Q6ZNQ3 347 aa4.47□□□□□ -1.69
ITGB1-213ENST00000484088 SLCO4C1Q6ZQN7 724 aa4.47□□□□□ -1.69
ITGB1-213ENST00000484088 ILDR2Q71H61 639 aa4.47□□□□□ -1.69
ITGB1-213ENST00000484088 GALNT6Q8NCL4 622 aa4.47□□□□□ -1.69
ITGB1-213ENST00000484088 BTBD6Q96KE9 485 aa4.47□□□□□ -1.69
ITGB1-213ENST00000484088 TRERF1Q96PN7 1200 aa4.47□□□□□ -1.69
ITGB1-213ENST00000484088 ZMIZ1Q9ULJ6 1067 aa4.47□□□□□ -1.69
ITGB1-213ENST00000484088 HCN4Q9Y3Q4 1203 aa4.47□□□□□ -1.69
ITGB1-213ENST00000484088 ATAD2Q6PL18 1390 aa4.46□□□□□ -1.7
ITGB1-213ENST00000484088 NEURL1BA8MQ27 555 aa4.46□□□□□ -1.7
ITGB1-213ENST00000484088 USP17L15C9J2P7 530 aa4.46□□□□□ -1.7
ITGB1-213ENST00000484088 USP17L10C9JJH3 530 aa4.46□□□□□ -1.7
ITGB1-213ENST00000484088 USP17L13C9JLJ4 530 aa4.46□□□□□ -1.7
ITGB1-213ENST00000484088 USP17L12C9JPN9 530 aa4.46□□□□□ -1.7
ITGB1-213ENST00000484088 USP17L11C9JVI0 530 aa4.46□□□□□ -1.7
ITGB1-213ENST00000484088 USP17L21D6R901 530 aa4.46□□□□□ -1.7
ITGB1-213ENST00000484088 USP17L18D6R9N7 530 aa4.46□□□□□ -1.7
ITGB1-213ENST00000484088 USP17L22D6RA61 530 aa4.46□□□□□ -1.7
ITGB1-213ENST00000484088 USP17L17D6RBQ6 530 aa4.46□□□□□ -1.7
ITGB1-213ENST00000484088 USP17L19D6RCP7 530 aa4.46□□□□□ -1.7
ITGB1-213ENST00000484088 USP17L20D6RJB6 530 aa4.46□□□□□ -1.7
ITGB1-213ENST00000484088 BACH1O14867 736 aa4.46□□□□□ -1.7
ITGB1-213ENST00000484088 ATG7O95352 703 aa4.46□□□□□ -1.7
ITGB1-213ENST00000484088 ARAFP10398 606 aa4.46□□□□□ -1.7
ITGB1-213ENST00000484088 RFX1P22670 979 aa4.46□□□□□ -1.7
ITGB1-213ENST00000484088 USP17L24Q0WX57 530 aa4.46□□□□□ -1.7
ITGB1-213ENST00000484088 EFHC2Q5JST6 749 aa4.46□□□□□ -1.7
ITGB1-213ENST00000484088 TRIM50Q86XT4 487 aa4.46□□□□□ -1.7
ITGB1-213ENST00000484088 STAG2Q8N3U4 1231 aa4.46□□□□□ -1.7
ITGB1-213ENST00000484088 TMEM151AQ8N4L1 468 aa4.46□□□□□ -1.7
ITGB1-213ENST00000484088 EDARADDQ8WWZ3 215 aa4.46□□□□□ -1.7
ITGB1-213ENST00000484088 PHACTR1Q9C0D0 580 aa4.46□□□□□ -1.7
ITGB1-213ENST00000484088 SERTM1A2A2V5 107 aa4.45□□□□□ -1.7
ITGB1-213ENST00000484088 CARNS1A5YM72 827 aa4.45□□□□□ -1.7
ITGB1-213ENST00000484088 FAM196BA6NMK8 535 aa4.45□□□□□ -1.7
ITGB1-213ENST00000484088 KHNYNO15037 678 aaKnown RBP4.45□□□□□ -1.7
ITGB1-213ENST00000484088 CSB-PGBD3P0DP91 1061 aa4.45□□□□□ -1.7
ITGB1-213ENST00000484088 RASA1P20936 1047 aa4.45□□□□□ -1.7
ITGB1-213ENST00000484088 WEE1P30291 646 aa4.45□□□□□ -1.7
ITGB1-213ENST00000484088 PCBP4P57723 403 aaKnown RBP4.45□□□□□ -1.7
ITGB1-213ENST00000484088 PSME1Q06323 249 aa4.45□□□□□ -1.7
ITGB1-213ENST00000484088 TYRO3Q06418 890 aa4.45□□□□□ -1.7
ITGB1-213ENST00000484088 PLA2G4EQ3MJ16 856 aa4.45□□□□□ -1.7
ITGB1-213ENST00000484088 CDCA8Q53HL2 280 aa4.45□□□□□ -1.7
ITGB1-213ENST00000484088 ZNF468Q5VIY5 522 aaPredicted RBP4.45□□□□□ -1.7
ITGB1-213ENST00000484088 FOXR1Q6PIV2 292 aa4.45□□□□□ -1.7
ITGB1-213ENST00000484088 CAPN12Q6ZSI9 719 aa4.45□□□□□ -1.7
ITGB1-213ENST00000484088 PGBD3Q8N328 593 aa4.45□□□□□ -1.7
ITGB1-213ENST00000484088 TRIM11Q96F44 468 aa4.45□□□□□ -1.7
ITGB1-213ENST00000484088 SUSD3Q96L08 255 aa4.45□□□□□ -1.7
ITGB1-213ENST00000484088 DNMT3AQ9Y6K1 912 aaPredicted RBP4.45□□□□□ -1.7
ITGB1-213ENST00000484088 BMP4P12644 408 aa4.44□□□□□ -1.7
ITGB1-213ENST00000484088 ATP1A2P50993 1020 aa4.44□□□□□ -1.7
ITGB1-213ENST00000484088 KCNQ4P56696 695 aa4.44□□□□□ -1.7
ITGB1-213ENST00000484088 PSMA6P60900 246 aaKnown RBP4.44□□□□□ -1.7
ITGB1-213ENST00000484088 ELOAQ14241 798 aaKnown RBP4.44□□□□□ -1.7
ITGB1-213ENST00000484088 ARSJQ5FYB0 599 aaPredicted RBP4.44□□□□□ -1.7
ITGB1-213ENST00000484088 C1orf53Q5VUE5 145 aa4.44□□□□□ -1.7
ITGB1-213ENST00000484088 ANKMY2Q8IV38 441 aa4.44□□□□□ -1.7
ITGB1-213ENST00000484088 ALDH16A1Q8IZ83 802 aa4.44□□□□□ -1.7
ITGB1-213ENST00000484088 STK32AQ8WU08 396 aa4.44□□□□□ -1.7
ITGB1-213ENST00000484088 SCG3Q8WXD2 468 aaKnown RBP4.44□□□□□ -1.7
ITGB1-213ENST00000484088 TRAIPQ9BWF2 469 aa4.44□□□□□ -1.7
ITGB1-213ENST00000484088 QTRT2Q9H974 415 aaKnown RBP4.44□□□□□ -1.7
ITGB1-213ENST00000484088 LRFN2Q9ULH4 789 aa4.44□□□□□ -1.7
ITGB1-213ENST00000484088 ITGB7P26010 798 aa4.43□□□□□ -1.7
ITGB1-213ENST00000484088 SEC13P55735 322 aa4.43□□□□□ -1.7
ITGB1-213ENST00000484088 SUZ12Q15022 739 aaKnown RBP4.43□□□□□ -1.7
ITGB1-213ENST00000484088 OCLNQ16625 522 aa4.43□□□□□ -1.7
ITGB1-213ENST00000484088 NBPF1Q3BBV0 1214 aa4.43□□□□□ -1.7
ITGB1-213ENST00000484088 FIGNL1Q6PIW4 674 aa4.43□□□□□ -1.7
ITGB1-213ENST00000484088 C8orf86Q6ZUL3 223 aa4.43□□□□□ -1.7
ITGB1-213ENST00000484088 RAB44Q7Z6P3 723 aaPredicted RBP4.43□□□□□ -1.7
ITGB1-213ENST00000484088 GOLGA6L1Q8N7Z2 621 aa4.43□□□□□ -1.7
ITGB1-213ENST00000484088 GDF2Q9UK05 429 aaPredicted RBP4.43□□□□□ -1.7
ITGB1-213ENST00000484088 PPP1R12BO60237 982 aaPredicted RBP4.42□□□□□ -1.7
ITGB1-213ENST00000484088 TATP17735 454 aaPredicted RBP4.42□□□□□ -1.7
ITGB1-213ENST00000484088 GTF2E1P29083 439 aaPredicted RBP4.42□□□□□ -1.7
ITGB1-213ENST00000484088 MARSP56192 900 aaKnown RBP4.42□□□□□ -1.7
ITGB1-213ENST00000484088 MAP3K10Q02779 954 aa4.42□□□□□ -1.7
ITGB1-213ENST00000484088 TMEM164Q5U3C3 297 aa4.42□□□□□ -1.7
ITGB1-213ENST00000484088 PHLDB3Q6NSJ2 640 aa4.42□□□□□ -1.7
ITGB1-213ENST00000484088 KANK3Q6NY19 840 aa4.42□□□□□ -1.7
ITGB1-213ENST00000484088 C20orf204Q6ZNR8 217 aa4.42□□□□□ -1.7
ITGB1-213ENST00000484088 CHSY3Q70JA7 882 aa4.42□□□□□ -1.7
ITGB1-213ENST00000484088 SYT9Q86SS6 491 aa4.42□□□□□ -1.7
ITGB1-213ENST00000484088 SCARF2Q96GP6 870 aaPredicted RBP4.42□□□□□ -1.7
ITGB1-213ENST00000484088 SPOCK3Q9BQ16 436 aa4.42□□□□□ -1.7
ITGB1-213ENST00000484088 VRTNQ9H8Y1 702 aa4.42□□□□□ -1.7
ITGB1-213ENST00000484088 MARK1Q9P0L2 795 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 154.8 ms