RNA–Protein interactions for RNA: ENST00000480539.1

ABCF3-213, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-213ENST00000480539 XAGE3Q8WTP9 111 aa19.52■□□□□ 0.72
ABCF3-213ENST00000480539 ZBTB3Q9H5J0 574 aa19.52■□□□□ 0.72
ABCF3-213ENST00000480539 DBF4Q9UBU7 674 aaPredicted RBP19.52■□□□□ 0.72
ABCF3-213ENST00000480539 MAP3K15Q6ZN16 1313 aa19.51■□□□□ 0.71
ABCF3-213ENST00000480539 NFIXQ14938 502 aa19.51■□□□□ 0.71
ABCF3-213ENST00000480539 CCDC30Q5VVM6 783 aa19.51■□□□□ 0.71
ABCF3-213ENST00000480539 TBC1D9BQ66K14 1250 aa19.51■□□□□ 0.71
ABCF3-213ENST00000480539 HLFQ16534 295 aa19.5■□□□□ 0.71
ABCF3-213ENST00000480539 COPS6Q7L5N1 327 aa19.5■□□□□ 0.71
ABCF3-213ENST00000480539 ZNF652Q9Y2D9 606 aa19.5■□□□□ 0.71
ABCF3-213ENST00000480539 PARP3Q9Y6F1 533 aa19.5■□□□□ 0.71
ABCF3-213ENST00000480539 ZBED9Q6R2W3 1325 aa19.5■□□□□ 0.71
ABCF3-213ENST00000480539 POLRMTO00411 1230 aaKnown RBP19.49■□□□□ 0.71
ABCF3-213ENST00000480539 STK31Q9BXU1 1019 aa19.49■□□□□ 0.71
ABCF3-213ENST00000480539 FHDC1Q9C0D6 1143 aaPredicted RBP19.49■□□□□ 0.71
ABCF3-213ENST00000480539 HYPKQ9NX55 129 aa19.49■□□□□ 0.71
ABCF3-213ENST00000480539 CARMIL3Q8ND23 1372 aa19.48■□□□□ 0.71
ABCF3-213ENST00000480539 VAMP4O75379 141 aa19.48■□□□□ 0.71
ABCF3-213ENST00000480539 TM4SF1P30408 202 aa19.48■□□□□ 0.71
ABCF3-213ENST00000480539 PHAXQ9H814 394 aaKnown RBP19.48■□□□□ 0.71
ABCF3-213ENST00000480539 C10orf71Q711Q0 1435 aa19.48■□□□□ 0.71
ABCF3-213ENST00000480539 ARFGEF2Q9Y6D5 1785 aa19.47■□□□□ 0.71
ABCF3-213ENST00000480539 NUP98P52948 1817 aa19.47■□□□□ 0.71
ABCF3-213ENST00000480539 AFDNP55196 1824 aaKnown RBP19.47■□□□□ 0.71
ABCF3-213ENST00000480539 NRXN2Q9P2S2 1712 aa19.47■□□□□ 0.71
ABCF3-213ENST00000480539 ATP10DQ9P241 1426 aa19.46■□□□□ 0.71
ABCF3-213ENST00000480539 ERVV-1B6SEH8 477 aa19.46■□□□□ 0.71
ABCF3-213ENST00000480539 CLEC4GQ6UXB4 293 aa19.46■□□□□ 0.71
ABCF3-213ENST00000480539 TRMT2AQ8IZ69 625 aaKnown RBP19.46■□□□□ 0.71
ABCF3-213ENST00000480539 CHMP4AQ9BY43 222 aa19.46■□□□□ 0.71
ABCF3-213ENST00000480539 ANKRD36CQ5JPF3 1778 aa19.46■□□□□ 0.71
ABCF3-213ENST00000480539 NIP7Q9Y221 180 aaKnown RBP eCLIP19.45■□□□□ 0.7
ABCF3-213ENST00000480539 RGL2O15211 777 aa19.44■□□□□ 0.7
ABCF3-213ENST00000480539 GPTP24298 496 aa19.44■□□□□ 0.7
ABCF3-213ENST00000480539 GIGYF2Q6Y7W6 1299 aaKnown RBP19.44■□□□□ 0.7
ABCF3-213ENST00000480539 SETDB2Q96T68 719 aa19.44■□□□□ 0.7
ABCF3-213ENST00000480539 KIF13BQ9NQT8 1826 aa19.44■□□□□ 0.7
ABCF3-213ENST00000480539 SLC4A2P04920 1241 aa19.43■□□□□ 0.7
ABCF3-213ENST00000480539 SERPINB2P05120 415 aa19.43■□□□□ 0.7
ABCF3-213ENST00000480539 G2E3Q7L622 706 aa19.43■□□□□ 0.7
ABCF3-213ENST00000480539 NLGN2Q8NFZ4 835 aa19.43■□□□□ 0.7
ABCF3-213ENST00000480539 UBN2Q6ZU65 1347 aa19.43■□□□□ 0.7
ABCF3-213ENST00000480539 KIAA1551Q9HCM1 1747 aa19.42■□□□□ 0.7
ABCF3-213ENST00000480539 FAM177BA6PVY3 158 aa19.42■□□□□ 0.7
ABCF3-213ENST00000480539 PLBD2Q8NHP8 589 aa19.42■□□□□ 0.7
ABCF3-213ENST00000480539 SYT17Q9BSW7 474 aa19.42■□□□□ 0.7
ABCF3-213ENST00000480539 ANKRD13DQ6ZTN6 518 aa19.41■□□□□ 0.7
ABCF3-213ENST00000480539 CCDC24Q8N4L8 307 aa19.41■□□□□ 0.7
ABCF3-213ENST00000480539 PXDNLA1KZ92 1463 aa19.41■□□□□ 0.7
ABCF3-213ENST00000480539 NPHP1O15259 732 aa19.4■□□□□ 0.7
ABCF3-213ENST00000480539 FLIIQ13045 1269 aa19.4■□□□□ 0.7
ABCF3-213ENST00000480539 PRR5LQ6MZQ0 368 aa19.4■□□□□ 0.7
ABCF3-213ENST00000480539 NBPF5PQ86XG9 351 aaPredicted RBP19.4■□□□□ 0.7
ABCF3-213ENST00000480539 CNBD1Q8NA66 436 aa19.4■□□□□ 0.7
ABCF3-213ENST00000480539 BCL2L13Q9BXK5 485 aa19.4■□□□□ 0.7
ABCF3-213ENST00000480539 CD2APQ9Y5K6 639 aa19.4■□□□□ 0.7
ABCF3-213ENST00000480539 DDX58O95786 925 aaKnown RBP19.39■□□□□ 0.69
ABCF3-213ENST00000480539 RIC3Q7Z5B4 369 aa19.39■□□□□ 0.69
ABCF3-213ENST00000480539 ZNF34Q8IZ26 560 aa19.39■□□□□ 0.69
ABCF3-213ENST00000480539 ZNF428Q96B54 188 aa19.39■□□□□ 0.69
ABCF3-213ENST00000480539 YTHDC1Q96MU7 727 aaKnown RBP19.39■□□□□ 0.69
ABCF3-213ENST00000480539 ADCY9O60503 1353 aa19.39■□□□□ 0.69
ABCF3-213ENST00000480539 N4BP2Q86UW6 1770 aaPredicted RBP19.39■□□□□ 0.69
ABCF3-213ENST00000480539 HSP90AB3PQ58FF7 597 aa19.38■□□□□ 0.69
ABCF3-213ENST00000480539 ANKRD31Q8N7Z5 1873 aa19.38■□□□□ 0.69
ABCF3-213ENST00000480539 COL11A2P13942 1736 aaPredicted RBP19.37■□□□□ 0.69
ABCF3-213ENST00000480539 TNRC6CQ9HCJ0 1690 aaKnown RBP19.37■□□□□ 0.69
ABCF3-213ENST00000480539 ABCC12Q96J65 1359 aa19.37■□□□□ 0.69
ABCF3-213ENST00000480539 IBTKQ9P2D0 1353 aaPredicted RBP19.37■□□□□ 0.69
ABCF3-213ENST00000480539 FKBP5Q13451 457 aaPredicted RBP19.37■□□□□ 0.69
ABCF3-213ENST00000480539 SSH1Q8WYL5 1049 aa19.37■□□□□ 0.69
ABCF3-213ENST00000480539 MAP3K2Q9Y2U5 619 aa19.37■□□□□ 0.69
ABCF3-213ENST00000480539 PI4KAP2A4QPH2 592 aa19.36■□□□□ 0.69
ABCF3-213ENST00000480539 ATP5J2-PTCD1G3V325 749 aa19.36■□□□□ 0.69
ABCF3-213ENST00000480539 ST5P78524 1137 aa19.36■□□□□ 0.69
ABCF3-213ENST00000480539 TCIRG1Q13488 830 aa19.36■□□□□ 0.69
ABCF3-213ENST00000480539 SUSD4Q5VX71 490 aa19.36■□□□□ 0.69
ABCF3-213ENST00000480539 NUTM1Q86Y26 1132 aa19.36■□□□□ 0.69
ABCF3-213ENST00000480539 PI4KAP1Q8N8J0 262 aa19.36■□□□□ 0.69
ABCF3-213ENST00000480539 MYD88Q99836 296 aa19.36■□□□□ 0.69
ABCF3-213ENST00000480539 WWC3Q9ULE0 1092 aa19.36■□□□□ 0.69
ABCF3-213ENST00000480539 CACNA1FO60840 1977 aa19.35■□□□□ 0.69
ABCF3-213ENST00000480539 NTSR2O95665 410 aa19.35■□□□□ 0.69
ABCF3-213ENST00000480539 CT47B1P0C2W7 299 aaPredicted RBP19.35■□□□□ 0.69
ABCF3-213ENST00000480539 PARP10Q53GL7 1025 aa19.35■□□□□ 0.69
ABCF3-213ENST00000480539 KSR2Q6VAB6 950 aa19.35■□□□□ 0.69
ABCF3-213ENST00000480539 NLRP10Q86W26 655 aa19.35■□□□□ 0.69
ABCF3-213ENST00000480539 MRPL50Q8N5N7 158 aaKnown RBP19.35■□□□□ 0.69
ABCF3-213ENST00000480539 SMC4Q9NTJ3 1288 aa19.35■□□□□ 0.69
ABCF3-213ENST00000480539 NYXQ9GZU5 481 aa19.34■□□□□ 0.69
ABCF3-213ENST00000480539 GTF2E1P29083 439 aaPredicted RBP19.33■□□□□ 0.68
ABCF3-213ENST00000480539 CHRNA5P30532 468 aa19.33■□□□□ 0.68
ABCF3-213ENST00000480539 ALDH1L2Q3SY69 923 aa19.33■□□□□ 0.68
ABCF3-213ENST00000480539 PPP1R42Q7Z4L9 355 aa19.33■□□□□ 0.68
ABCF3-213ENST00000480539 ISCA1Q9BUE6 129 aa19.33■□□□□ 0.68
ABCF3-213ENST00000480539 METTL22Q9BUU2 404 aaPredicted RBP19.33■□□□□ 0.68
ABCF3-213ENST00000480539 DLEC1Q9Y238 1755 aa19.32■□□□□ 0.68
ABCF3-213ENST00000480539 A0A0G2JLW4 131 aa19.32■□□□□ 0.68
ABCF3-213ENST00000480539 F6X3S4 739 aa19.32■□□□□ 0.68
ABCF3-213ENST00000480539 DPEP1P16444 411 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms