RNA–Protein interactions for RNA: ENST00000478503.6

SH3D19-207, Transcript of SH3 domain containing 19, humanhuman

TSL 2

Gene SH3D19, Length 4,038 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-207ENST00000478503 MX1P20591 662 aa7.34□□□□□ -1.23
SH3D19-207ENST00000478503 RINLQ6ZS11 566 aa7.34□□□□□ -1.23
SH3D19-207ENST00000478503 NLRP2Q9NX02 1062 aa7.34□□□□□ -1.23
SH3D19-207ENST00000478503 ARHGEF10O15013 1369 aa7.34□□□□□ -1.23
SH3D19-207ENST00000478503 DHX16O60231 1041 aaKnown RBP7.34□□□□□ -1.24
SH3D19-207ENST00000478503 PROSER2Q86WR7 435 aaPredicted RBP7.34□□□□□ -1.24
SH3D19-207ENST00000478503 SIL1Q9H173 461 aa7.34□□□□□ -1.24
SH3D19-207ENST00000478503 KIAA0232Q92628 1395 aa7.33□□□□□ -1.24
SH3D19-207ENST00000478503 GAS2L3Q86XJ1 694 aa7.33□□□□□ -1.24
SH3D19-207ENST00000478503 SSH2Q76I76 1423 aa7.33□□□□□ -1.24
SH3D19-207ENST00000478503 MAP3K5Q99683 1374 aa7.33□□□□□ -1.24
SH3D19-207ENST00000478503 UBR1Q8IWV7 1749 aa7.33□□□□□ -1.24
SH3D19-207ENST00000478503 CSB-PGBD3P0DP91 1061 aa7.33□□□□□ -1.24
SH3D19-207ENST00000478503 CPA1P15085 419 aa7.33□□□□□ -1.24
SH3D19-207ENST00000478503 KLHDC4Q8TBB5 520 aa7.33□□□□□ -1.24
SH3D19-207ENST00000478503 TRAIPQ9BWF2 469 aa7.33□□□□□ -1.24
SH3D19-207ENST00000478503 SRCIN1Q9C0H9 1055 aa7.33□□□□□ -1.24
SH3D19-207ENST00000478503 ERC2O15083 957 aa7.33□□□□□ -1.24
SH3D19-207ENST00000478503 GNAI3P08754 354 aa7.33□□□□□ -1.24
SH3D19-207ENST00000478503 C1orf141Q5JVX7 400 aa7.33□□□□□ -1.24
SH3D19-207ENST00000478503 ANKRD24Q8TF21 1146 aa7.33□□□□□ -1.24
SH3D19-207ENST00000478503 IP6K1Q92551 441 aa7.33□□□□□ -1.24
SH3D19-207ENST00000478503 SNX21Q969T3 373 aa7.33□□□□□ -1.24
SH3D19-207ENST00000478503 KLHL42Q9P2K6 505 aa7.33□□□□□ -1.24
SH3D19-207ENST00000478503 DDX49Q9Y6V7 483 aaKnown RBP7.33□□□□□ -1.24
SH3D19-207ENST00000478503 RGPD8O14715 1765 aaPredicted RBP7.33□□□□□ -1.24
SH3D19-207ENST00000478503 C3P01024 1663 aa7.33□□□□□ -1.24
SH3D19-207ENST00000478503 SPG7Q9UQ90 795 aa7.32□□□□□ -1.24
SH3D19-207ENST00000478503 SOS1Q07889 1333 aaPredicted RBP7.32□□□□□ -1.24
SH3D19-207ENST00000478503 KNDC1Q76NI1 1749 aa7.32□□□□□ -1.24
SH3D19-207ENST00000478503 REREQ9P2R6 1566 aa7.32□□□□□ -1.24
SH3D19-207ENST00000478503 EIF4A1P60842 406 aaKnown RBP7.32□□□□□ -1.24
SH3D19-207ENST00000478503 ATP8B2P98198 1209 aa7.32□□□□□ -1.24
SH3D19-207ENST00000478503 C9orf78Q9NZ63 289 aaPredicted RBP7.32□□□□□ -1.24
SH3D19-207ENST00000478503 GABBR1Q9UBS5 961 aa7.32□□□□□ -1.24
SH3D19-207ENST00000478503 RAB3GAP1Q15042 981 aa7.32□□□□□ -1.24
SH3D19-207ENST00000478503 AXDND1Q5T1B0 1012 aaPredicted RBP7.32□□□□□ -1.24
SH3D19-207ENST00000478503 CWC27Q6UX04 472 aaKnown RBP7.32□□□□□ -1.24
SH3D19-207ENST00000478503 GBP4Q96PP9 640 aa7.32□□□□□ -1.24
SH3D19-207ENST00000478503 MAP3K2Q9Y2U5 619 aa7.32□□□□□ -1.24
SH3D19-207ENST00000478503 PRPF40AO75400 957 aaKnown RBP7.31□□□□□ -1.24
SH3D19-207ENST00000478503 ZFYVE27Q5T4F4 411 aa7.31□□□□□ -1.24
SH3D19-207ENST00000478503 FAM117AQ9C073 453 aa7.31□□□□□ -1.24
SH3D19-207ENST00000478503 GDPD2Q9HCC8 539 aa7.31□□□□□ -1.24
SH3D19-207ENST00000478503 KDRP35968 1356 aa7.31□□□□□ -1.24
SH3D19-207ENST00000478503 DIP2AQ14689 1571 aa7.31□□□□□ -1.24
SH3D19-207ENST00000478503 ITSN1Q15811 1721 aa7.31□□□□□ -1.24
SH3D19-207ENST00000478503 REC8O95072 547 aa7.31□□□□□ -1.24
SH3D19-207ENST00000478503 RABEP1Q15276 862 aa7.31□□□□□ -1.24
SH3D19-207ENST00000478503 KRT28Q7Z3Y7 464 aa7.31□□□□□ -1.24
SH3D19-207ENST00000478503 DNAAF4Q8WXU2 420 aa7.31□□□□□ -1.24
SH3D19-207ENST00000478503 PIK3R5Q8WYR1 880 aa7.31□□□□□ -1.24
SH3D19-207ENST00000478503 HSPA2P54652 639 aa7.31□□□□□ -1.24
SH3D19-207ENST00000478503 CAVIN1Q6NZI2 390 aaKnown RBP7.31□□□□□ -1.24
SH3D19-207ENST00000478503 RRAGDQ9NQL2 400 aaPredicted RBP7.31□□□□□ -1.24
SH3D19-207ENST00000478503 NDUFB9Q9Y6M9 179 aa7.31□□□□□ -1.24
SH3D19-207ENST00000478503 MON2Q7Z3U7 1717 aa7.31□□□□□ -1.24
SH3D19-207ENST00000478503 DDX11L8A8MPP1 907 aa7.3□□□□□ -1.24
SH3D19-207ENST00000478503 ST18O60284 1047 aa7.3□□□□□ -1.24
SH3D19-207ENST00000478503 BAG4O95429 457 aaKnown RBP7.3□□□□□ -1.24
SH3D19-207ENST00000478503 DDIT3P35638 169 aa7.3□□□□□ -1.24
SH3D19-207ENST00000478503 SPATA32Q96LK8 384 aa7.3□□□□□ -1.24
SH3D19-207ENST00000478503 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.3□□□□□ -1.24
SH3D19-207ENST00000478503 AK9Q5TCS8 1911 aa7.3□□□□□ -1.24
SH3D19-207ENST00000478503 DNTTIP2Q5QJE6 756 aaKnown RBP7.3□□□□□ -1.24
SH3D19-207ENST00000478503 GET4Q7L5D6 327 aaPredicted RBP7.3□□□□□ -1.24
SH3D19-207ENST00000478503 NFATC2IPQ8NCF5 419 aa7.3□□□□□ -1.24
SH3D19-207ENST00000478503 ESYT1Q9BSJ8 1104 aa7.3□□□□□ -1.24
SH3D19-207ENST00000478503 ZNF330Q9Y3S2 320 aaPredicted RBP7.3□□□□□ -1.24
SH3D19-207ENST00000478503 CHMLP26374 656 aa7.3□□□□□ -1.24
SH3D19-207ENST00000478503 PLEKHO1Q53GL0 409 aaPredicted RBP7.3□□□□□ -1.24
SH3D19-207ENST00000478503 KRI1Q8N9T8 703 aaKnown RBP7.3□□□□□ -1.24
SH3D19-207ENST00000478503 RHPN1Q8TCX5 695 aa7.3□□□□□ -1.24
SH3D19-207ENST00000478503 EVI5LQ96CN4 794 aa7.3□□□□□ -1.24
SH3D19-207ENST00000478503 CCDC8Q9H0W5 538 aaPredicted RBP7.3□□□□□ -1.24
SH3D19-207ENST00000478503 VIRMAQ69YN4 1812 aaKnown RBP7.3□□□□□ -1.24
SH3D19-207ENST00000478503 UNCXA6NJT0 531 aa7.3□□□□□ -1.24
SH3D19-207ENST00000478503 WDHD1O75717 1129 aaPredicted RBP7.3□□□□□ -1.24
SH3D19-207ENST00000478503 L1TD1Q5T7N2 865 aaKnown RBP7.29□□□□□ -1.24
SH3D19-207ENST00000478503 TMX3Q96JJ7 454 aa7.29□□□□□ -1.24
SH3D19-207ENST00000478503 GRPEL1Q9HAV7 217 aa7.29□□□□□ -1.24
SH3D19-207ENST00000478503 RNMTO43148 476 aaKnown RBP7.29□□□□□ -1.24
SH3D19-207ENST00000478503 TCEANC2Q96MN5 208 aa7.29□□□□□ -1.24
SH3D19-207ENST00000478503 ATP5J2-PTCD1G3V325 749 aa7.29□□□□□ -1.24
SH3D19-207ENST00000478503 PTCD1O75127 700 aaKnown RBP7.29□□□□□ -1.24
SH3D19-207ENST00000478503 BEND3Q5T5X7 828 aa7.29□□□□□ -1.24
SH3D19-207ENST00000478503 ZNF513Q8N8E2 541 aaPredicted RBP7.29□□□□□ -1.24
SH3D19-207ENST00000478503 KCNV2Q8TDN2 545 aa7.29□□□□□ -1.24
SH3D19-207ENST00000478503 NSFL1CQ9UNZ2 370 aaKnown RBP7.29□□□□□ -1.24
SH3D19-207ENST00000478503 GOLGA6L22H0YM25 854 aa7.28□□□□□ -1.24
SH3D19-207ENST00000478503 EDC3Q96F86 508 aaKnown RBP7.28□□□□□ -1.24
SH3D19-207ENST00000478503 ISY1Q9ULR0 285 aaKnown RBP7.28□□□□□ -1.24
SH3D19-207ENST00000478503 CHGBP05060 677 aa7.28□□□□□ -1.24
SH3D19-207ENST00000478503 RIC3Q7Z5B4 369 aa7.28□□□□□ -1.24
SH3D19-207ENST00000478503 ARHGEF25Q86VW2 580 aa7.28□□□□□ -1.24
SH3D19-207ENST00000478503 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.28□□□□□ -1.24
SH3D19-207ENST00000478503 AKAP12Q02952 1782 aa7.28□□□□□ -1.24
SH3D19-207ENST00000478503 HTATSF1O43719 755 aaKnown RBP7.28□□□□□ -1.24
SH3D19-207ENST00000478503 AKAP4Q5JQC9 854 aa7.28□□□□□ -1.24
SH3D19-207ENST00000478503 RNF214Q8ND24 703 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms