RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-222ENST00000477937 ADCY9O60503 1353 aa18.07■□□□□ 0.48
HDAC7-222ENST00000477937 SBF1O95248 1867 aa18.07■□□□□ 0.48
HDAC7-222ENST00000477937 MYL6BP14649 208 aa18.06■□□□□ 0.48
HDAC7-222ENST00000477937 ST5P78524 1137 aa18.06■□□□□ 0.48
HDAC7-222ENST00000477937 TTLL6Q8N841 843 aa18.06■□□□□ 0.48
HDAC7-222ENST00000477937 LAS1LQ9Y4W2 734 aaKnown RBP18.06■□□□□ 0.48
HDAC7-222ENST00000477937 ERBB4Q15303 1308 aa18.05■□□□□ 0.48
HDAC7-222ENST00000477937 ERVV-1B6SEH8 477 aa18.05■□□□□ 0.48
HDAC7-222ENST00000477937 NBPF5PQ86XG9 351 aaPredicted RBP18.05■□□□□ 0.48
HDAC7-222ENST00000477937 CCDC24Q8N4L8 307 aa18.05■□□□□ 0.48
HDAC7-222ENST00000477937 NIP7Q9Y221 180 aaKnown RBP eCLIP18.05■□□□□ 0.48
HDAC7-222ENST00000477937 CHL1O00533 1208 aa18.04■□□□□ 0.48
HDAC7-222ENST00000477937 EIF2S2P20042 333 aaKnown RBP18.04■□□□□ 0.48
HDAC7-222ENST00000477937 HLFQ16534 295 aa18.04■□□□□ 0.48
HDAC7-222ENST00000477937 KIF6Q6ZMV9 814 aa18.04■□□□□ 0.48
HDAC7-222ENST00000477937 GPBP1L1Q9HC44 474 aaPredicted RBP18.04■□□□□ 0.48
HDAC7-222ENST00000477937 MAP3K15Q6ZN16 1313 aa18.03■□□□□ 0.48
HDAC7-222ENST00000477937 TPTE2Q6XPS3 522 aa18.03■□□□□ 0.48
HDAC7-222ENST00000477937 ZNF622Q969S3 477 aaKnown RBP eCLIP18.03■□□□□ 0.48
HDAC7-222ENST00000477937 CACNA1SQ13698 1873 aa18.03■□□□□ 0.48
HDAC7-222ENST00000477937 CCDC88AQ3V6T2 1871 aa18.03■□□□□ 0.48
HDAC7-222ENST00000477937 APAF1O14727 1248 aa18.02■□□□□ 0.48
HDAC7-222ENST00000477937 COL11A2P13942 1736 aaPredicted RBP18.02■□□□□ 0.48
HDAC7-222ENST00000477937 ZNF526Q8TF50 670 aaPredicted RBP18.02■□□□□ 0.48
HDAC7-222ENST00000477937 ANP32CO43423 234 aa18.01■□□□□ 0.47
HDAC7-222ENST00000477937 C1QTNF8P60827 252 aa18.01■□□□□ 0.47
HDAC7-222ENST00000477937 C9orf131Q5VYM1 1079 aa18.01■□□□□ 0.47
HDAC7-222ENST00000477937 TTLL7Q6ZT98 887 aa18.01■□□□□ 0.47
HDAC7-222ENST00000477937 FAM177BA6PVY3 158 aa18■□□□□ 0.47
HDAC7-222ENST00000477937 GTF2E1P29083 439 aaPredicted RBP18■□□□□ 0.47
HDAC7-222ENST00000477937 CFAP44Q96MT7 982 aa18■□□□□ 0.47
HDAC7-222ENST00000477937 ZBTB3Q9H5J0 574 aa18■□□□□ 0.47
HDAC7-222ENST00000477937 CALD1Q05682 793 aaKnown RBP17.99■□□□□ 0.47
HDAC7-222ENST00000477937 PDIA6Q15084 440 aa17.99■□□□□ 0.47
HDAC7-222ENST00000477937 CCDC184Q52MB2 194 aa17.99■□□□□ 0.47
HDAC7-222ENST00000477937 STYK1Q6J9G0 422 aa17.99■□□□□ 0.47
HDAC7-222ENST00000477937 CNKSR1Q969H4 720 aa17.99■□□□□ 0.47
HDAC7-222ENST00000477937 NYXQ9GZU5 481 aa17.99■□□□□ 0.47
HDAC7-222ENST00000477937 ARFGEF2Q9Y6D5 1785 aa17.99■□□□□ 0.47
HDAC7-222ENST00000477937 SLX4Q8IY92 1834 aa17.98■□□□□ 0.47
HDAC7-222ENST00000477937 SRGNP10124 158 aa17.98■□□□□ 0.47
HDAC7-222ENST00000477937 KRT24Q2M2I5 525 aa17.98■□□□□ 0.47
HDAC7-222ENST00000477937 GIGYF2Q6Y7W6 1299 aaKnown RBP17.98■□□□□ 0.47
HDAC7-222ENST00000477937 NECTIN2Q92692 538 aa17.98■□□□□ 0.47
HDAC7-222ENST00000477937 MASTLQ96GX5 879 aa17.98■□□□□ 0.47
HDAC7-222ENST00000477937 RNF181Q9P0P0 153 aa17.98■□□□□ 0.47
HDAC7-222ENST00000477937 LRP10Q7Z4F1 713 aa17.97■□□□□ 0.47
HDAC7-222ENST00000477937 FER1L6Q2WGJ9 1857 aa17.97■□□□□ 0.47
HDAC7-222ENST00000477937 KLRG2A4D1S0 409 aaPredicted RBP17.96■□□□□ 0.47
HDAC7-222ENST00000477937 ANXA1P04083 346 aa17.96■□□□□ 0.47
HDAC7-222ENST00000477937 HOXB7P09629 217 aa17.96■□□□□ 0.47
HDAC7-222ENST00000477937 GPTP24298 496 aa17.96■□□□□ 0.47
HDAC7-222ENST00000477937 RASSF7Q02833 373 aa17.96■□□□□ 0.47
HDAC7-222ENST00000477937 PROSER3Q2NL68 480 aa17.96■□□□□ 0.47
HDAC7-222ENST00000477937 DDX21Q9NR30 783 aaKnown RBP eCLIP17.96■□□□□ 0.47
HDAC7-222ENST00000477937 MBIPQ9NS73 344 aa17.96■□□□□ 0.47
HDAC7-222ENST00000477937 ZNF219Q9P2Y4 722 aaPredicted RBP17.96■□□□□ 0.47
HDAC7-222ENST00000477937 C21orf2O43822 256 aa17.95■□□□□ 0.46
HDAC7-222ENST00000477937 ZNF853P0CG23 659 aa17.95■□□□□ 0.46
HDAC7-222ENST00000477937 NPR1P16066 1061 aa17.95■□□□□ 0.46
HDAC7-222ENST00000477937 GNAI1P63096 354 aa17.95■□□□□ 0.46
HDAC7-222ENST00000477937 ZNF34Q8IZ26 560 aa17.95■□□□□ 0.46
HDAC7-222ENST00000477937 MRS2Q9HD23 443 aa17.95■□□□□ 0.46
HDAC7-222ENST00000477937 IFT57Q9NWB7 429 aa17.95■□□□□ 0.46
HDAC7-222ENST00000477937 LMNB1P20700 586 aa17.94■□□□□ 0.46
HDAC7-222ENST00000477937 AIMP1Q12904 312 aaKnown RBP17.94■□□□□ 0.46
HDAC7-222ENST00000477937 HDGFL1Q5TGJ6 251 aa17.94■□□□□ 0.46
HDAC7-222ENST00000477937 PRPF40BQ6NWY9 871 aaKnown RBP17.94■□□□□ 0.46
HDAC7-222ENST00000477937 COPS6Q7L5N1 327 aa17.94■□□□□ 0.46
HDAC7-222ENST00000477937 XAGE3Q8WTP9 111 aa17.94■□□□□ 0.46
HDAC7-222ENST00000477937 ANKRD36CQ5JPF3 1778 aa17.94■□□□□ 0.46
HDAC7-222ENST00000477937 DICER1Q9UPY3 1922 aaKnown RBP17.94■□□□□ 0.46
HDAC7-222ENST00000477937 SOGA3Q5TF21 947 aa17.93■□□□□ 0.46
HDAC7-222ENST00000477937 DUSP27Q5VZP5 1158 aa17.93■□□□□ 0.46
HDAC7-222ENST00000477937 PPP1R42Q7Z4L9 355 aa17.93■□□□□ 0.46
HDAC7-222ENST00000477937 NUTM1Q86Y26 1132 aa17.93■□□□□ 0.46
HDAC7-222ENST00000477937 CHPF2Q9P2E5 772 aa17.93■□□□□ 0.46
HDAC7-222ENST00000477937 UBN2Q6ZU65 1347 aa17.93■□□□□ 0.46
HDAC7-222ENST00000477937 IBTKQ9P2D0 1353 aaPredicted RBP17.92■□□□□ 0.46
HDAC7-222ENST00000477937 NFKBIEO00221 500 aa17.92■□□□□ 0.46
HDAC7-222ENST00000477937 ERFEQ4G0M1 354 aa17.92■□□□□ 0.46
HDAC7-222ENST00000477937 PARP10Q53GL7 1025 aa17.92■□□□□ 0.46
HDAC7-222ENST00000477937 SUSD4Q5VX71 490 aa17.92■□□□□ 0.46
HDAC7-222ENST00000477937 DBF4Q9UBU7 674 aaPredicted RBP17.92■□□□□ 0.46
HDAC7-222ENST00000477937 KIF3CO14782 793 aa17.91■□□□□ 0.46
HDAC7-222ENST00000477937 ALDH1B1P30837 517 aa17.91■□□□□ 0.46
HDAC7-222ENST00000477937 HSP90AB3PQ58FF7 597 aa17.91■□□□□ 0.46
HDAC7-222ENST00000477937 KDM2BQ8NHM5 1336 aa17.91■□□□□ 0.46
HDAC7-222ENST00000477937 ZC3H4Q9UPT8 1303 aaKnown RBP17.91■□□□□ 0.46
HDAC7-222ENST00000477937 TNRC6CQ9HCJ0 1690 aaKnown RBP17.9■□□□□ 0.46
HDAC7-222ENST00000477937 ABCC12Q96J65 1359 aa17.9■□□□□ 0.46
HDAC7-222ENST00000477937 TIAM2Q8IVF5 1701 aa17.89■□□□□ 0.46
HDAC7-222ENST00000477937 SENP3-EIF4A1A0A087X0R7 540 aa17.89■□□□□ 0.45
HDAC7-222ENST00000477937 NTSR2O95665 410 aa17.89■□□□□ 0.45
HDAC7-222ENST00000477937 PRELPP51888 382 aa17.89■□□□□ 0.45
HDAC7-222ENST00000477937 CCDC27Q2M243 656 aa17.89■□□□□ 0.45
HDAC7-222ENST00000477937 CRY2Q49AN0 593 aa17.89■□□□□ 0.45
HDAC7-222ENST00000477937 UTP14AQ9BVJ6 771 aaKnown RBP17.89■□□□□ 0.45
HDAC7-222ENST00000477937 NMRK2Q9NPI5 230 aa17.89■□□□□ 0.45
HDAC7-222ENST00000477937 HYPKQ9NX55 129 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms