RNA–Protein interactions for RNA: ENST00000477833.5

ARHGEF3-209, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 3

Gene ARHGEF3, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-209ENST00000477833 COPS6Q7L5N1 327 aa6.64□□□□□ -1.35
ARHGEF3-209ENST00000477833 DNAAF4Q8WXU2 420 aa6.64□□□□□ -1.35
ARHGEF3-209ENST00000477833 HYPKQ9NX55 129 aa6.64□□□□□ -1.35
ARHGEF3-209ENST00000477833 SSUH2Q9Y2M2 353 aa6.64□□□□□ -1.35
ARHGEF3-209ENST00000477833 MAP3K2Q9Y2U5 619 aa6.64□□□□□ -1.35
ARHGEF3-209ENST00000477833 ERBB4Q15303 1308 aa6.64□□□□□ -1.35
ARHGEF3-209ENST00000477833 ANKRD36CQ5JPF3 1778 aa6.64□□□□□ -1.35
ARHGEF3-209ENST00000477833 BCORQ6W2J9 1755 aa6.64□□□□□ -1.35
ARHGEF3-209ENST00000477833 TAF1LQ8IZX4 1826 aa6.64□□□□□ -1.35
ARHGEF3-209ENST00000477833 EP400Q96L91 3159 aa6.63□□□□□ -1.35
ARHGEF3-209ENST00000477833 IGKV5-2P06315 115 aa6.63□□□□□ -1.35
ARHGEF3-209ENST00000477833 CYP19A1P11511 503 aaPredicted RBP6.63□□□□□ -1.35
ARHGEF3-209ENST00000477833 CCT4P50991 539 aaKnown RBP6.63□□□□□ -1.35
ARHGEF3-209ENST00000477833 KCNQ4P56696 695 aa6.63□□□□□ -1.35
ARHGEF3-209ENST00000477833 HDAC1Q13547 482 aaPredicted RBP6.63□□□□□ -1.35
ARHGEF3-209ENST00000477833 CWF19L2Q2TBE0 894 aaKnown RBP6.63□□□□□ -1.35
ARHGEF3-209ENST00000477833 CEP85Q6P2H3 762 aa6.63□□□□□ -1.35
ARHGEF3-209ENST00000477833 KSR2Q6VAB6 950 aa6.63□□□□□ -1.35
ARHGEF3-209ENST00000477833 VSIG10Q8N0Z9 540 aa6.63□□□□□ -1.35
ARHGEF3-209ENST00000477833 FBXO41Q8TF61 875 aa6.63□□□□□ -1.35
ARHGEF3-209ENST00000477833 USP44Q9H0E7 712 aa6.63□□□□□ -1.35
ARHGEF3-209ENST00000477833 TNS1Q9HBL0 1735 aaKnown RBP6.63□□□□□ -1.35
ARHGEF3-209ENST00000477833 ZBTB1Q9Y2K1 713 aa6.63□□□□□ -1.35
ARHGEF3-209ENST00000477833 SCN7AQ01118 1682 aa6.62□□□□□ -1.35
ARHGEF3-209ENST00000477833 LOC102724428A0A0B4J2F2 783 aa6.62□□□□□ -1.35
ARHGEF3-209ENST00000477833 NBPF7P0C2Y1 421 aaPredicted RBP6.62□□□□□ -1.35
ARHGEF3-209ENST00000477833 SIK1P57059 783 aa6.62□□□□□ -1.35
ARHGEF3-209ENST00000477833 AAMPQ13685 434 aa6.62□□□□□ -1.35
ARHGEF3-209ENST00000477833 POTEAQ6S8J7 498 aa6.62□□□□□ -1.35
ARHGEF3-209ENST00000477833 LINC00116Q8NCU8 138 aa6.62□□□□□ -1.35
ARHGEF3-209ENST00000477833 SRCIN1Q9C0H9 1055 aa6.62□□□□□ -1.35
ARHGEF3-209ENST00000477833 PDE4AP27815 886 aa6.61□□□□□ -1.35
ARHGEF3-209ENST00000477833 INTS5Q6P9B9 1019 aaKnown RBP6.61□□□□□ -1.35
ARHGEF3-209ENST00000477833 SMIM5Q71RC9 77 aa6.61□□□□□ -1.35
ARHGEF3-209ENST00000477833 ILDR1Q86SU0 546 aaPredicted RBP6.61□□□□□ -1.35
ARHGEF3-209ENST00000477833 AMIGO3Q86WK7 504 aa6.61□□□□□ -1.35
ARHGEF3-209ENST00000477833 SMC5Q8IY18 1101 aa6.61□□□□□ -1.35
ARHGEF3-209ENST00000477833 ANKRD44Q8N8A2 993 aa6.61□□□□□ -1.35
ARHGEF3-209ENST00000477833 KAZALD1Q96I82 304 aa6.61□□□□□ -1.35
ARHGEF3-209ENST00000477833 MYD88Q99836 296 aa6.61□□□□□ -1.35
ARHGEF3-209ENST00000477833 METTL22Q9BUU2 404 aaPredicted RBP6.61□□□□□ -1.35
ARHGEF3-209ENST00000477833 ZBTB3Q9H5J0 574 aa6.61□□□□□ -1.35
ARHGEF3-209ENST00000477833 PDZRN3Q9UPQ7 1066 aa6.61□□□□□ -1.35
ARHGEF3-209ENST00000477833 LRRFIP2Q9Y608 721 aaKnown RBP6.61□□□□□ -1.35
ARHGEF3-209ENST00000477833 NUP98P52948 1817 aa6.61□□□□□ -1.35
ARHGEF3-209ENST00000477833 C4AP0C0L4 1744 aa6.61□□□□□ -1.35
ARHGEF3-209ENST00000477833 C4BP0C0L5 1744 aa6.61□□□□□ -1.35
ARHGEF3-209ENST00000477833 IBTKQ9P2D0 1353 aaPredicted RBP6.6□□□□□ -1.35
ARHGEF3-209ENST00000477833 UTYO14607 1347 aa6.6□□□□□ -1.35
ARHGEF3-209ENST00000477833 PNMA6EA0A0J9YXQ4 647 aa6.6□□□□□ -1.35
ARHGEF3-209ENST00000477833 NEURL1BA8MQ27 555 aa6.6□□□□□ -1.35
ARHGEF3-209ENST00000477833 ATP5J2-PTCD1G3V325 749 aa6.6□□□□□ -1.35
ARHGEF3-209ENST00000477833 ALDH1L1O75891 902 aa6.6□□□□□ -1.35
ARHGEF3-209ENST00000477833 ATP6V1AP38606 617 aa6.6□□□□□ -1.35
ARHGEF3-209ENST00000477833 CRKLP46109 303 aaKnown RBP6.6□□□□□ -1.35
ARHGEF3-209ENST00000477833 CASP7P55210 303 aa6.6□□□□□ -1.35
ARHGEF3-209ENST00000477833 RBM6P78332 1123 aaKnown RBP6.6□□□□□ -1.35
ARHGEF3-209ENST00000477833 ZNF772Q68DY9 489 aaPredicted RBP6.6□□□□□ -1.35
ARHGEF3-209ENST00000477833 ANKRD13DQ6ZTN6 518 aa6.6□□□□□ -1.35
ARHGEF3-209ENST00000477833 KRT27Q7Z3Y8 459 aa6.6□□□□□ -1.35
ARHGEF3-209ENST00000477833 RIC3Q7Z5B4 369 aa6.6□□□□□ -1.35
ARHGEF3-209ENST00000477833 LINS1Q8NG48 757 aa6.6□□□□□ -1.35
ARHGEF3-209ENST00000477833 PLBD2Q8NHP8 589 aa6.6□□□□□ -1.35
ARHGEF3-209ENST00000477833 JARID2Q92833 1246 aaPredicted RBP6.6□□□□□ -1.35
ARHGEF3-209ENST00000477833 SUCLG2Q96I99 432 aa6.6□□□□□ -1.35
ARHGEF3-209ENST00000477833 CHMP4AQ9BY43 222 aa6.6□□□□□ -1.35
ARHGEF3-209ENST00000477833 TUBGCP6Q96RT7 1819 aa6.6□□□□□ -1.35
ARHGEF3-209ENST00000477833 STARD3NLO95772 234 aa6.59□□□□□ -1.35
ARHGEF3-209ENST00000477833 DDX58O95786 925 aaKnown RBP6.59□□□□□ -1.35
ARHGEF3-209ENST00000477833 GNAI2P04899 355 aa6.59□□□□□ -1.35
ARHGEF3-209ENST00000477833 GNAI3P08754 354 aa6.59□□□□□ -1.35
ARHGEF3-209ENST00000477833 EIF5P55010 431 aaKnown RBP6.59□□□□□ -1.35
ARHGEF3-209ENST00000477833 GCKRQ14397 625 aa6.59□□□□□ -1.35
ARHGEF3-209ENST00000477833 HLFQ16534 295 aa6.59□□□□□ -1.35
ARHGEF3-209ENST00000477833 EPHA10Q5JZY3 1008 aa6.59□□□□□ -1.35
ARHGEF3-209ENST00000477833 SMARCC1Q92922 1105 aaPredicted RBP6.59□□□□□ -1.35
ARHGEF3-209ENST00000477833 ISCA1Q9BUE6 129 aa6.59□□□□□ -1.35
ARHGEF3-209ENST00000477833 TEX13AQ9BXU3 409 aaPredicted RBP6.59□□□□□ -1.35
ARHGEF3-209ENST00000477833 RWDD1Q9H446 243 aaPredicted RBP6.59□□□□□ -1.35
ARHGEF3-209ENST00000477833 TSHZ2Q9NRE2 1034 aa6.59□□□□□ -1.35
ARHGEF3-209ENST00000477833 CCDC87Q9NVE4 849 aa6.59□□□□□ -1.35
ARHGEF3-209ENST00000477833 ZNF330Q9Y3S2 320 aaPredicted RBP6.59□□□□□ -1.35
ARHGEF3-209ENST00000477833 UBR3Q6ZT12 1888 aa6.59□□□□□ -1.35
ARHGEF3-209ENST00000477833 COL24A1Q17RW2 1714 aa6.59□□□□□ -1.36
ARHGEF3-209ENST00000477833 COL15A1P39059 1388 aa6.58□□□□□ -1.36
ARHGEF3-209ENST00000477833 MAP3K15Q6ZN16 1313 aa6.58□□□□□ -1.36
ARHGEF3-209ENST00000477833 CNTNAP4Q9C0A0 1308 aa6.58□□□□□ -1.36
ARHGEF3-209ENST00000477833 GRM8O00222 908 aa6.58□□□□□ -1.36
ARHGEF3-209ENST00000477833 CAMTA2O94983 1202 aa6.58□□□□□ -1.36
ARHGEF3-209ENST00000477833 UBTFL1P0CB47 393 aaPredicted RBP6.58□□□□□ -1.36
ARHGEF3-209ENST00000477833 RGS3P49796 1198 aa6.58□□□□□ -1.36
ARHGEF3-209ENST00000477833 NUCB1Q02818 461 aa6.58□□□□□ -1.36
ARHGEF3-209ENST00000477833 REM2Q8IYK8 340 aaPredicted RBP6.58□□□□□ -1.36
ARHGEF3-209ENST00000477833 BCL11BQ9C0K0 894 aaPredicted RBP6.58□□□□□ -1.36
ARHGEF3-209ENST00000477833 DCTPP1Q9H773 170 aa6.58□□□□□ -1.36
ARHGEF3-209ENST00000477833 LRRC4BQ9NT99 713 aa6.58□□□□□ -1.36
ARHGEF3-209ENST00000477833 LAMB2P55268 1798 aa6.58□□□□□ -1.36
ARHGEF3-209ENST00000477833 CASZ1Q86V15 1759 aa6.58□□□□□ -1.36
ARHGEF3-209ENST00000477833 DDX60Q8IY21 1712 aaKnown RBP6.58□□□□□ -1.36
ARHGEF3-209ENST00000477833 COL4A1P02462 1669 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms