RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 NKX1-1Q15270 411 aaPredicted RBP14.08□□□□□ -0.16
NUP188-205ENST00000477069 TTC5Q8N0Z6 440 aa14.08□□□□□ -0.16
NUP188-205ENST00000477069 METTL22Q9BUU2 404 aaPredicted RBP14.08□□□□□ -0.16
NUP188-205ENST00000477069 TNS2Q63HR2 1409 aa14.07□□□□□ -0.16
NUP188-205ENST00000477069 MYL6BP14649 208 aa14.07□□□□□ -0.16
NUP188-205ENST00000477069 CABP4P57796 275 aa14.07□□□□□ -0.16
NUP188-205ENST00000477069 COPS6Q7L5N1 327 aa14.07□□□□□ -0.16
NUP188-205ENST00000477069 COL15A1P39059 1388 aa14.07□□□□□ -0.16
NUP188-205ENST00000477069 TTC41PQ6P2S7 1318 aa14.07□□□□□ -0.16
NUP188-205ENST00000477069 TRIM6-TRIM34B2RNG4 842 aa14.07□□□□□ -0.16
NUP188-205ENST00000477069 RIC3Q7Z5B4 369 aa14.07□□□□□ -0.16
NUP188-205ENST00000477069 RILPL2Q969X0 211 aa14.07□□□□□ -0.16
NUP188-205ENST00000477069 BICC1Q9H694 974 aaKnown RBP14.07□□□□□ -0.16
NUP188-205ENST00000477069 EPB41L2O43491 1005 aaKnown RBP14.06□□□□□ -0.16
NUP188-205ENST00000477069 CARD10Q9BWT7 1032 aa14.06□□□□□ -0.16
NUP188-205ENST00000477069 IL25Q9H293 177 aa14.06□□□□□ -0.16
NUP188-205ENST00000477069 GCKRQ14397 625 aa14.06□□□□□ -0.16
NUP188-205ENST00000477069 ZCRB1Q8TBF4 217 aaKnown RBP14.06□□□□□ -0.16
NUP188-205ENST00000477069 TOM1L2Q6ZVM7 507 aa14.05□□□□□ -0.16
NUP188-205ENST00000477069 PLCH1Q4KWH8 1693 aa14.05□□□□□ -0.16
NUP188-205ENST00000477069 TNPO1Q92973 898 aaKnown RBP14.05□□□□□ -0.16
NUP188-205ENST00000477069 PA2G4Q9UQ80 394 aaKnown RBP14.05□□□□□ -0.16
NUP188-205ENST00000477069 WNK3Q9BYP7 1800 aa14.05□□□□□ -0.16
NUP188-205ENST00000477069 COL22A1Q8NFW1 1626 aaPredicted RBP14.05□□□□□ -0.16
NUP188-205ENST00000477069 ERVV-2B6SEH9 535 aa14.04□□□□□ -0.16
NUP188-205ENST00000477069 ERC1Q8IUD2 1116 aa14.04□□□□□ -0.16
NUP188-205ENST00000477069 ERBB4Q15303 1308 aa14.04□□□□□ -0.16
NUP188-205ENST00000477069 ANAPC15P60006 121 aa14.04□□□□□ -0.16
NUP188-205ENST00000477069 ANKRD13DQ6ZTN6 518 aa14.04□□□□□ -0.16
NUP188-205ENST00000477069 MYD88Q99836 296 aa14.04□□□□□ -0.16
NUP188-205ENST00000477069 IL2RBP14784 551 aa14.04□□□□□ -0.16
NUP188-205ENST00000477069 NEXNQ0ZGT2 675 aa14.04□□□□□ -0.16
NUP188-205ENST00000477069 PALD1Q9ULE6 856 aa14.04□□□□□ -0.16
NUP188-205ENST00000477069 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.04□□□□□ -0.16
NUP188-205ENST00000477069 COL14A1Q05707 1796 aaKnown RBP14.03□□□□□ -0.16
NUP188-205ENST00000477069 ST18O60284 1047 aa14.03□□□□□ -0.16
NUP188-205ENST00000477069 SASH1O94885 1247 aa14.03□□□□□ -0.16
NUP188-205ENST00000477069 ITGB4P16144 1822 aa14.03□□□□□ -0.16
NUP188-205ENST00000477069 COL16A1Q07092 1604 aaPredicted RBP14.03□□□□□ -0.16
NUP188-205ENST00000477069 GLRX3O76003 335 aaKnown RBP14.02□□□□□ -0.16
NUP188-205ENST00000477069 PIP4K2AP48426 406 aaPredicted RBP14.02□□□□□ -0.16
NUP188-205ENST00000477069 EPHA10Q5JZY3 1008 aa14.02□□□□□ -0.16
NUP188-205ENST00000477069 CLEC17AQ6ZS10 378 aa14.02□□□□□ -0.16
NUP188-205ENST00000477069 CLASRPQ8N2M8 674 aaKnown RBP14.02□□□□□ -0.16
NUP188-205ENST00000477069 FOXD4L1Q9NU39 408 aa14.02□□□□□ -0.16
NUP188-205ENST00000477069 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.02□□□□□ -0.16
NUP188-205ENST00000477069 NBPF26B4DH59 902 aa14.02□□□□□ -0.17
NUP188-205ENST00000477069 MAP4K4O95819 1239 aaPredicted RBP14.02□□□□□ -0.17
NUP188-205ENST00000477069 OS9Q13438 667 aaPredicted RBP14.02□□□□□ -0.17
NUP188-205ENST00000477069 NBPF14Q5TI25 921 aa14.02□□□□□ -0.17
NUP188-205ENST00000477069 NBPF10Q6P3W6 841 aaKnown RBP14.02□□□□□ -0.17
NUP188-205ENST00000477069 CNTROBQ8N137 903 aa14.02□□□□□ -0.17
NUP188-205ENST00000477069 NBPF15Q8N660 670 aa14.02□□□□□ -0.17
NUP188-205ENST00000477069 DDX11L8A8MPP1 907 aa14.01□□□□□ -0.17
NUP188-205ENST00000477069 SGSM2O43147 1006 aa14.01□□□□□ -0.17
NUP188-205ENST00000477069 CASP7P55210 303 aa14.01□□□□□ -0.17
NUP188-205ENST00000477069 ANO2Q9NQ90 1003 aa14.01□□□□□ -0.17
NUP188-205ENST00000477069 ROBO1Q9Y6N7 1651 aa14.01□□□□□ -0.17
NUP188-205ENST00000477069 HSP90AA1P07900 732 aaKnown RBP14.01□□□□□ -0.17
NUP188-205ENST00000477069 RABL6Q3YEC7 729 aaPredicted RBP14.01□□□□□ -0.17
NUP188-205ENST00000477069 PLBD2Q8NHP8 589 aa14.01□□□□□ -0.17
NUP188-205ENST00000477069 ECHDC1Q9NTX5 307 aa14.01□□□□□ -0.17
NUP188-205ENST00000477069 CYP2E1P05181 493 aaPredicted RBP14.01□□□□□ -0.17
NUP188-205ENST00000477069 HSPA4P34932 840 aa14.01□□□□□ -0.17
NUP188-205ENST00000477069 AHDC1Q5TGY3 1603 aaPredicted RBP14.01□□□□□ -0.17
NUP188-205ENST00000477069 RAD50Q92878 1312 aa14□□□□□ -0.17
NUP188-205ENST00000477069 MCCP23508 829 aa14□□□□□ -0.17
NUP188-205ENST00000477069 RFX5P48382 616 aaPredicted RBP14□□□□□ -0.17
NUP188-205ENST00000477069 DISP2A7MBM2 1401 aa14□□□□□ -0.17
NUP188-205ENST00000477069 LRP6O75581 1613 aa14□□□□□ -0.17
NUP188-205ENST00000477069 EAF2Q96CJ1 260 aaPredicted RBP13.99□□□□□ -0.17
NUP188-205ENST00000477069 LSG1Q9H089 658 aaKnown RBP13.99□□□□□ -0.17
NUP188-205ENST00000477069 SSFA2P28290 1259 aa13.99□□□□□ -0.17
NUP188-205ENST00000477069 COPRSQ9NQ92 184 aa13.99□□□□□ -0.17
NUP188-205ENST00000477069 TRAK2O60296 914 aa13.98□□□□□ -0.17
NUP188-205ENST00000477069 AACSQ86V21 672 aa13.98□□□□□ -0.17
NUP188-205ENST00000477069 IFIT2P09913 472 aaKnown RBP13.98□□□□□ -0.17
NUP188-205ENST00000477069 G3BP1Q13283 466 aaKnown RBP eCLIP13.98□□□□□ -0.172e-6■■■■□ 19.6
NUP188-205ENST00000477069 GBP4Q96PP9 640 aa13.98□□□□□ -0.17
NUP188-205ENST00000477069 CWC22Q9HCG8 908 aaKnown RBP13.98□□□□□ -0.17
NUP188-205ENST00000477069 MCM2P49736 904 aa13.97□□□□□ -0.17
NUP188-205ENST00000477069 NEK4P51957 841 aa13.97□□□□□ -0.17
NUP188-205ENST00000477069 GPATCH3Q96I76 525 aa13.97□□□□□ -0.17
NUP188-205ENST00000477069 STRN4Q9NRL3 753 aa13.97□□□□□ -0.17
NUP188-205ENST00000477069 KLHDC4Q8TBB5 520 aa13.97□□□□□ -0.17
NUP188-205ENST00000477069 PTPN12Q05209 780 aaKnown RBP13.97□□□□□ -0.17
NUP188-205ENST00000477069 CUL4AQ13619 759 aa13.97□□□□□ -0.17
NUP188-205ENST00000477069 ZGPATQ8N5A5 531 aaKnown RBP13.97□□□□□ -0.17
NUP188-205ENST00000477069 IL27Q8NEV9 243 aa13.97□□□□□ -0.17
NUP188-205ENST00000477069 TLR7Q9NYK1 1049 aaKnown RBP13.97□□□□□ -0.17
NUP188-205ENST00000477069 EVI5LQ96CN4 794 aa13.96□□□□□ -0.17
NUP188-205ENST00000477069 ATP5J2-PTCD1G3V325 749 aa13.96□□□□□ -0.18
NUP188-205ENST00000477069 H7C1W4 665 aa13.96□□□□□ -0.18
NUP188-205ENST00000477069 PTCD1O75127 700 aaKnown RBP13.96□□□□□ -0.18
NUP188-205ENST00000477069 TTLL7Q6ZT98 887 aa13.96□□□□□ -0.18
NUP188-205ENST00000477069 UBE3BQ7Z3V4 1068 aa13.96□□□□□ -0.18
NUP188-205ENST00000477069 DDX54Q8TDD1 881 aaKnown RBP13.96□□□□□ -0.18
NUP188-205ENST00000477069 TMX3Q96JJ7 454 aa13.96□□□□□ -0.18
NUP188-205ENST00000477069 EVA1CP58658 441 aa13.95□□□□□ -0.18
NUP188-205ENST00000477069 NUCB2P80303 420 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms