RNA–Protein interactions for RNA: ENST00000476784.5

TTC3-215, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2

Gene TTC3, Length 7,425 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-215ENST00000476784 PDE4BQ07343 736 aa7.74□□□□□ -1.17
TTC3-215ENST00000476784 WAPLQ7Z5K2 1190 aa7.74□□□□□ -1.17
TTC3-215ENST00000476784 CADPS2Q86UW7 1296 aa7.74□□□□□ -1.17
TTC3-215ENST00000476784 PPP1R14CQ8TAE6 165 aa7.74□□□□□ -1.17
TTC3-215ENST00000476784 PANK1Q8TE04 598 aa7.74□□□□□ -1.17
TTC3-215ENST00000476784 FNDC3AQ9Y2H6 1198 aaKnown RBP7.74□□□□□ -1.17
TTC3-215ENST00000476784 NOP56O00567 594 aaKnown RBP7.74□□□□□ -1.17
TTC3-215ENST00000476784 PDCP20941 246 aa7.73□□□□□ -1.17
TTC3-215ENST00000476784 PHF8Q9UPP1 1060 aa7.73□□□□□ -1.17
TTC3-215ENST00000476784 NIP7Q9Y221 180 aaKnown RBP eCLIP7.73□□□□□ -1.17
TTC3-215ENST00000476784 RAB3GAP1Q15042 981 aa7.73□□□□□ -1.17
TTC3-215ENST00000476784 CCDC152Q4G0S7 254 aa7.73□□□□□ -1.17
TTC3-215ENST00000476784 TDRD12Q587J7 1177 aaKnown RBP7.73□□□□□ -1.17
TTC3-215ENST00000476784 FKBP15Q5T1M5 1219 aa7.73□□□□□ -1.17
TTC3-215ENST00000476784 ZNF804AQ7Z570 1209 aa7.73□□□□□ -1.17
TTC3-215ENST00000476784 SLC12A7Q9Y666 1083 aa7.73□□□□□ -1.17
TTC3-215ENST00000476784 CCDC7Q96M83 1385 aa7.73□□□□□ -1.17
TTC3-215ENST00000476784 TBCAO75347 108 aaKnown RBP7.73□□□□□ -1.17
TTC3-215ENST00000476784 LDHAL6AQ6ZMR3 332 aa7.73□□□□□ -1.17
TTC3-215ENST00000476784 IFIT3O14879 490 aaKnown RBP7.73□□□□□ -1.17
TTC3-215ENST00000476784 GNPATO15228 680 aa7.73□□□□□ -1.17
TTC3-215ENST00000476784 TTC30BQ8N4P2 665 aa7.73□□□□□ -1.17
TTC3-215ENST00000476784 JARID2Q92833 1246 aaPredicted RBP7.73□□□□□ -1.17
TTC3-215ENST00000476784 IMPG2Q9BZV3 1241 aa7.73□□□□□ -1.17
TTC3-215ENST00000476784 TNIKQ9UKE5 1360 aa7.73□□□□□ -1.17
TTC3-215ENST00000476784 H7C1D1 291 aa7.73□□□□□ -1.17
TTC3-215ENST00000476784 CHST3Q7LGC8 479 aa7.73□□□□□ -1.17
TTC3-215ENST00000476784 CALML4Q96GE6 196 aa7.73□□□□□ -1.17
TTC3-215ENST00000476784 RRBP1Q9P2E9 1410 aaKnown RBP7.73□□□□□ -1.17
TTC3-215ENST00000476784 NACADO15069 1562 aa7.73□□□□□ -1.17
TTC3-215ENST00000476784 ATP5J2-PTCD1G3V325 749 aa7.73□□□□□ -1.17
TTC3-215ENST00000476784 CUL4BQ13620 913 aa7.73□□□□□ -1.17
TTC3-215ENST00000476784 H0YIN7 160 aa7.72□□□□□ -1.17
TTC3-215ENST00000476784 EIF3JO75822 258 aaKnown RBP7.72□□□□□ -1.17
TTC3-215ENST00000476784 PSMC4P43686 418 aa7.72□□□□□ -1.17
TTC3-215ENST00000476784 TRAPPC3LQ5T215 181 aa7.72□□□□□ -1.17
TTC3-215ENST00000476784 BLOC1S2Q6QNY1 142 aa7.72□□□□□ -1.17
TTC3-215ENST00000476784 MICAL1Q8TDZ2 1067 aa7.72□□□□□ -1.17
TTC3-215ENST00000476784 EYA3Q99504 573 aa7.72□□□□□ -1.17
TTC3-215ENST00000476784 CCT4P50991 539 aaKnown RBP7.72□□□□□ -1.17
TTC3-215ENST00000476784 ANKRD1Q15327 319 aa7.72□□□□□ -1.17
TTC3-215ENST00000476784 CCDC129Q6ZRS4 1044 aa7.72□□□□□ -1.17
TTC3-215ENST00000476784 GSDMBQ8TAX9 411 aa7.72□□□□□ -1.17
TTC3-215ENST00000476784 PDE3AQ14432 1141 aa7.72□□□□□ -1.17
TTC3-215ENST00000476784 FNBP4Q8N3X1 1017 aaPredicted RBP7.72□□□□□ -1.17
TTC3-215ENST00000476784 BOLA2Q9H3K6 86 aa7.72□□□□□ -1.17
TTC3-215ENST00000476784 PFDN4Q9NQP4 134 aa7.72□□□□□ -1.17
TTC3-215ENST00000476784 AMOTL2Q9Y2J4 779 aa7.72□□□□□ -1.17
TTC3-215ENST00000476784 NFE2L2Q16236 605 aa7.72□□□□□ -1.17
TTC3-215ENST00000476784 CCDC40Q4G0X9 1142 aa7.72□□□□□ -1.17
TTC3-215ENST00000476784 PAGR1Q9BTK6 254 aa7.72□□□□□ -1.17
TTC3-215ENST00000476784 IRX3P78415 501 aaPredicted RBP7.72□□□□□ -1.17
TTC3-215ENST00000476784 SPA17Q15506 151 aa7.72□□□□□ -1.17
TTC3-215ENST00000476784 CRNKL1Q9BZJ0 848 aaKnown RBP7.72□□□□□ -1.17
TTC3-215ENST00000476784 MRVI1Q9Y6F6 885 aa7.72□□□□□ -1.17
TTC3-215ENST00000476784 DCAF1Q9Y4B6 1507 aa7.72□□□□□ -1.17
TTC3-215ENST00000476784 MKRN3Q13064 507 aaKnown RBP7.72□□□□□ -1.17
TTC3-215ENST00000476784 RBM27Q9P2N5 1060 aaKnown RBP7.72□□□□□ -1.17
TTC3-215ENST00000476784 GUCY1B3Q02153 619 aa7.71□□□□□ -1.17
TTC3-215ENST00000476784 RASA3Q14644 834 aa7.71□□□□□ -1.17
TTC3-215ENST00000476784 JAKMIP1Q96N16 626 aaKnown RBP7.71□□□□□ -1.17
TTC3-215ENST00000476784 CFAP45Q9UL16 551 aa7.71□□□□□ -1.17
TTC3-215ENST00000476784 ZNF213O14771 459 aa7.71□□□□□ -1.17
TTC3-215ENST00000476784 OTUD7BQ6GQQ9 843 aa7.71□□□□□ -1.17
TTC3-215ENST00000476784 NUDT16Q96DE0 195 aaKnown RBP7.71□□□□□ -1.17
TTC3-215ENST00000476784 ZBED2Q9BTP6 218 aa7.71□□□□□ -1.17
TTC3-215ENST00000476784 CCDC12Q8WUD4 166 aaPredicted RBP7.71□□□□□ -1.18
TTC3-215ENST00000476784 SMARCC1Q92922 1105 aaPredicted RBP7.71□□□□□ -1.18
TTC3-215ENST00000476784 TIGD1Q96MW7 591 aa7.71□□□□□ -1.18
TTC3-215ENST00000476784 FAM193BQ96PV7 902 aaPredicted RBP7.71□□□□□ -1.18
TTC3-215ENST00000476784 SNRKQ9NRH2 765 aa7.71□□□□□ -1.18
TTC3-215ENST00000476784 CCDC87Q9NVE4 849 aa7.71□□□□□ -1.18
TTC3-215ENST00000476784 EXOSC9Q06265 439 aaKnown RBP7.71□□□□□ -1.18
TTC3-215ENST00000476784 KIF7Q2M1P5 1343 aa7.71□□□□□ -1.18
TTC3-215ENST00000476784 LARP1BQ659C4 914 aaKnown RBP7.71□□□□□ -1.18
TTC3-215ENST00000476784 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.71□□□□□ -1.18
TTC3-215ENST00000476784 SSRP1Q08945 709 aaKnown RBP7.7□□□□□ -1.18
TTC3-215ENST00000476784 CABLES1Q8TDN4 633 aa7.7□□□□□ -1.18
TTC3-215ENST00000476784 TSR2Q969E8 191 aaKnown RBP7.7□□□□□ -1.18
TTC3-215ENST00000476784 DCPSQ96C86 337 aaKnown RBP7.7□□□□□ -1.18
TTC3-215ENST00000476784 RBM17Q96I25 401 aaKnown RBP7.7□□□□□ -1.18
TTC3-215ENST00000476784 CSADQ9Y600 493 aa7.7□□□□□ -1.18
TTC3-215ENST00000476784 IKBKGQ9Y6K9 419 aa7.7□□□□□ -1.18
TTC3-215ENST00000476784 SCAPERQ9BY12 1400 aa7.7□□□□□ -1.18
TTC3-215ENST00000476784 SPDYE16A6NNV3 312 aaPredicted RBP7.7□□□□□ -1.18
TTC3-215ENST00000476784 PPP2R5CQ13362 524 aa7.7□□□□□ -1.18
TTC3-215ENST00000476784 SPDYE2Q495Y8 402 aa7.7□□□□□ -1.18
TTC3-215ENST00000476784 GADL1Q6ZQY3 521 aa7.7□□□□□ -1.18
TTC3-215ENST00000476784 NIM1KQ8IY84 436 aa7.7□□□□□ -1.18
TTC3-215ENST00000476784 MICALL1Q8N3F8 863 aa7.7□□□□□ -1.18
TTC3-215ENST00000476784 GOLGA1Q92805 767 aa7.7□□□□□ -1.18
TTC3-215ENST00000476784 NYXQ9GZU5 481 aa7.7□□□□□ -1.18
TTC3-215ENST00000476784 NOB1Q9ULX3 412 aaKnown RBP7.7□□□□□ -1.18
TTC3-215ENST00000476784 C4orf50Q6ZRC1 276 aa7.7□□□□□ -1.18
TTC3-215ENST00000476784 EXOC6Q8TAG9 804 aa7.7□□□□□ -1.18
TTC3-215ENST00000476784 CCDC196A0A1B0GTZ2 297 aa7.7□□□□□ -1.18
TTC3-215ENST00000476784 CCER2I3L3R5 266 aa7.7□□□□□ -1.18
TTC3-215ENST00000476784 FGFR1OPO95684 399 aaKnown RBP7.7□□□□□ -1.18
TTC3-215ENST00000476784 FAM98CQ17RN3 349 aaKnown RBP7.7□□□□□ -1.18
TTC3-215ENST00000476784 ACRBPQ8NEB7 543 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms