RNA–Protein interactions for RNA: ENST00000476742.1

NPHP3-207, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 650 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-207ENST00000476742 POU4F2Q12837 409 aa6.3□□□□□ -1.4
NPHP3-207ENST00000476742 DPYDQ12882 1025 aa6.3□□□□□ -1.4
NPHP3-207ENST00000476742 TAS1R3Q7RTX0 852 aa6.3□□□□□ -1.4
NPHP3-207ENST00000476742 PPARGC1BQ86YN6 1023 aaKnown RBP6.3□□□□□ -1.4
NPHP3-207ENST00000476742 NBPF15Q8N660 670 aa6.3□□□□□ -1.4
NPHP3-207ENST00000476742 FAM200AQ8TCP9 573 aa6.3□□□□□ -1.4
NPHP3-207ENST00000476742 RHBDD1Q8TEB9 315 aa6.3□□□□□ -1.4
NPHP3-207ENST00000476742 FHDC1Q9C0D6 1143 aaPredicted RBP6.3□□□□□ -1.4
NPHP3-207ENST00000476742 SFI1A8K8P3 1242 aa6.29□□□□□ -1.4
NPHP3-207ENST00000476742 RHOQP17081 205 aa6.29□□□□□ -1.4
NPHP3-207ENST00000476742 MTFR1Q15390 333 aa6.29□□□□□ -1.4
NPHP3-207ENST00000476742 WDR44Q5JSH3 913 aa6.29□□□□□ -1.4
NPHP3-207ENST00000476742 NBPF10Q6P3W6 841 aaKnown RBP6.29□□□□□ -1.4
NPHP3-207ENST00000476742 RRAGCQ9HB90 399 aa6.29□□□□□ -1.4
NPHP3-207ENST00000476742 NOVA2Q9UNW9 492 aaKnown RBP6.29□□□□□ -1.4
NPHP3-207ENST00000476742 ATG7O95352 703 aa6.28□□□□□ -1.4
NPHP3-207ENST00000476742 SRPK2P78362 688 aaKnown RBP6.28□□□□□ -1.4
NPHP3-207ENST00000476742 ELOAQ14241 798 aaKnown RBP6.28□□□□□ -1.4
NPHP3-207ENST00000476742 GMCL1Q96IK5 515 aa6.28□□□□□ -1.4
NPHP3-207ENST00000476742 HINFPQ9BQA5 517 aa6.28□□□□□ -1.4
NPHP3-207ENST00000476742 NIFKQ9BYG3 293 aaKnown RBP6.28□□□□□ -1.4
NPHP3-207ENST00000476742 GNB5O14775 395 aa6.27□□□□□ -1.41
NPHP3-207ENST00000476742 DKK1O94907 266 aa6.27□□□□□ -1.41
NPHP3-207ENST00000476742 LCE5AQ5TCM9 118 aa6.27□□□□□ -1.41
NPHP3-207ENST00000476742 FOXR1Q6PIV2 292 aa6.27□□□□□ -1.41
NPHP3-207ENST00000476742 TNS4Q8IZW8 715 aa6.27□□□□□ -1.41
NPHP3-207ENST00000476742 TIMMDC1Q9NPL8 285 aa6.27□□□□□ -1.41
NPHP3-207ENST00000476742 CABP1Q9NZU7 370 aa6.27□□□□□ -1.41
NPHP3-207ENST00000476742 SCHIP1Q9P0W5 487 aaPredicted RBP6.27□□□□□ -1.41
NPHP3-207ENST00000476742 CHMP3Q9Y3E7 222 aa6.27□□□□□ -1.41
NPHP3-207ENST00000476742 HOXB4P17483 251 aaPredicted RBP6.26□□□□□ -1.41
NPHP3-207ENST00000476742 PHKA2P46019 1235 aa6.26□□□□□ -1.41
NPHP3-207ENST00000476742 C4orf17Q53FE4 359 aa6.26□□□□□ -1.41
NPHP3-207ENST00000476742 TSEN2Q8NCE0 465 aaKnown RBP6.26□□□□□ -1.41
NPHP3-207ENST00000476742 ARXQ96QS3 562 aa6.26□□□□□ -1.41
NPHP3-207ENST00000476742 NSFL1CQ9UNZ2 370 aaKnown RBP6.26□□□□□ -1.41
NPHP3-207ENST00000476742 DYRK1BQ9Y463 629 aa6.26□□□□□ -1.41
NPHP3-207ENST00000476742 A0A1B0GTH6 734 aa6.25□□□□□ -1.41
NPHP3-207ENST00000476742 GPR25O00155 361 aa6.25□□□□□ -1.41
NPHP3-207ENST00000476742 PLA2G4AP47712 749 aa6.25□□□□□ -1.41
NPHP3-207ENST00000476742 EPHA4P54764 986 aa6.25□□□□□ -1.41
NPHP3-207ENST00000476742 SLC9A9Q8IVB4 645 aa6.25□□□□□ -1.41
NPHP3-207ENST00000476742 GAS2L2Q8NHY3 880 aa6.25□□□□□ -1.41
NPHP3-207ENST00000476742 AIDAQ96BJ3 306 aa6.25□□□□□ -1.41
NPHP3-207ENST00000476742 ZNF837Q96EG3 531 aaPredicted RBP6.25□□□□□ -1.41
NPHP3-207ENST00000476742 OXCT2Q9BYC2 517 aaPredicted RBP6.25□□□□□ -1.41
NPHP3-207ENST00000476742 TPSG1Q9NRR2 321 aa6.25□□□□□ -1.41
NPHP3-207ENST00000476742 NOP53Q9NZM5 478 aaKnown RBP6.25□□□□□ -1.41
NPHP3-207ENST00000476742 PSMA6P60900 246 aaKnown RBP6.24□□□□□ -1.41
NPHP3-207ENST00000476742 SWI5Q1ZZU3 235 aa6.24□□□□□ -1.41
NPHP3-207ENST00000476742 NBPF1Q3BBV0 1214 aa6.24□□□□□ -1.41
NPHP3-207ENST00000476742 GAS2L1Q99501 681 aaPredicted RBP6.24□□□□□ -1.41
NPHP3-207ENST00000476742 TSPAN10Q9H1Z9 355 aaPredicted RBP6.24□□□□□ -1.41
NPHP3-207ENST00000476742 ZNF232Q9UNY5 417 aa6.24□□□□□ -1.41
NPHP3-207ENST00000476742 IQSEC3Q9UPP2 1182 aaPredicted RBP6.24□□□□□ -1.41
NPHP3-207ENST00000476742 ATAD2Q6PL18 1390 aa6.23□□□□□ -1.41
NPHP3-207ENST00000476742 SERTM1A2A2V5 107 aa6.23□□□□□ -1.41
NPHP3-207ENST00000476742 H7C1W4 665 aa6.23□□□□□ -1.41
NPHP3-207ENST00000476742 PPP1R12BO60237 982 aaPredicted RBP6.23□□□□□ -1.41
NPHP3-207ENST00000476742 F11P03951 625 aa6.23□□□□□ -1.41
NPHP3-207ENST00000476742 CSB-PGBD3P0DP91 1061 aa6.23□□□□□ -1.41
NPHP3-207ENST00000476742 TATP17735 454 aaPredicted RBP6.23□□□□□ -1.41
NPHP3-207ENST00000476742 NOS2P35228 1153 aa6.23□□□□□ -1.41
NPHP3-207ENST00000476742 TEAD4Q15561 434 aa6.23□□□□□ -1.41
NPHP3-207ENST00000476742 RIPOR1Q6ZS17 1223 aa6.23□□□□□ -1.41
NPHP3-207ENST00000476742 PGBD3Q8N328 593 aa6.23□□□□□ -1.41
NPHP3-207ENST00000476742 C1orf216Q8TAB5 229 aa6.23□□□□□ -1.41
NPHP3-207ENST00000476742 SCG3Q8WXD2 468 aaKnown RBP6.23□□□□□ -1.41
NPHP3-207ENST00000476742 USP3Q9Y6I4 520 aa6.23□□□□□ -1.41
NPHP3-207ENST00000476742 TBCELQ5QJ74 424 aa6.22□□□□□ -1.41
NPHP3-207ENST00000476742 STK32AQ8WU08 396 aa6.22□□□□□ -1.41
NPHP3-207ENST00000476742 CHMP7Q8WUX9 453 aaPredicted RBP6.22□□□□□ -1.41
NPHP3-207ENST00000476742 L3MBTL2Q969R5 705 aa6.22□□□□□ -1.41
NPHP3-207ENST00000476742 ZMIZ1Q9ULJ6 1067 aa6.22□□□□□ -1.41
NPHP3-207ENST00000476742 RNF114Q9Y508 228 aa6.22□□□□□ -1.41
NPHP3-207ENST00000476742 MX2P20592 715 aa6.21□□□□□ -1.42
NPHP3-207ENST00000476742 IGFBP4P22692 258 aa6.21□□□□□ -1.42
NPHP3-207ENST00000476742 TMEM164Q5U3C3 297 aa6.21□□□□□ -1.42
NPHP3-207ENST00000476742 TRIM22Q8IYM9 498 aa6.21□□□□□ -1.42
NPHP3-207ENST00000476742 STAG2Q8N3U4 1231 aa6.21□□□□□ -1.42
NPHP3-207ENST00000476742 GPAMQ9HCL2 828 aa6.21□□□□□ -1.42
NPHP3-207ENST00000476742 ZDHHC3Q9NYG2 299 aa6.21□□□□□ -1.42
NPHP3-207ENST00000476742 PARP3Q9Y6F1 533 aa6.21□□□□□ -1.42
NPHP3-207ENST00000476742 MSX1P28360 303 aa6.2□□□□□ -1.42
NPHP3-207ENST00000476742 LBRQ14739 615 aaKnown RBP6.2□□□□□ -1.42
NPHP3-207ENST00000476742 ARSJQ5FYB0 599 aaPredicted RBP6.2□□□□□ -1.42
NPHP3-207ENST00000476742 EFHC2Q5JST6 749 aa6.2□□□□□ -1.42
NPHP3-207ENST00000476742 C1orf229Q6ZS94 237 aaPredicted RBP6.2□□□□□ -1.42
NPHP3-207ENST00000476742 ZNF295-AS1Q8N0V1 137 aa6.2□□□□□ -1.42
NPHP3-207ENST00000476742 VTI1AQ96AJ9 217 aa6.2□□□□□ -1.42
NPHP3-207ENST00000476742 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.2□□□□□ -1.42
NPHP3-207ENST00000476742 FOXO3O43524 673 aa6.19□□□□□ -1.42
NPHP3-207ENST00000476742 C21orf2O43822 256 aa6.19□□□□□ -1.42
NPHP3-207ENST00000476742 LGR5O75473 907 aa6.19□□□□□ -1.42
NPHP3-207ENST00000476742 WEE1P30291 646 aa6.19□□□□□ -1.42
NPHP3-207ENST00000476742 MAP2K3P46734 347 aa6.19□□□□□ -1.42
NPHP3-207ENST00000476742 PDE4CQ08493 712 aa6.19□□□□□ -1.42
NPHP3-207ENST00000476742 BICDL1Q6ZP65 573 aa6.19□□□□□ -1.42
NPHP3-207ENST00000476742 ZDHHC1Q8WTX9 485 aa6.19□□□□□ -1.42
NPHP3-207ENST00000476742 NUCKS1Q9H1E3 243 aaKnown RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms