RNA–Protein interactions for RNA: ENST00000476558.7

CCDC7-206, Transcript of coiled-coil domain containing 7, humanhuman

TSL 2

Gene CCDC7, Length 1,819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-206ENST00000476558 A1BGP04217 495 aa28.49■■■□□ 2.15
CCDC7-206ENST00000476558 NUP188Q5SRE5 1749 aa28.48■■■□□ 2.15
CCDC7-206ENST00000476558 SURF6O75683 361 aaKnown RBP28.48■■■□□ 2.15
CCDC7-206ENST00000476558 MFAP1P55081 439 aaKnown RBP28.48■■■□□ 2.15
CCDC7-206ENST00000476558 SUCLG2Q96I99 432 aa28.48■■■□□ 2.15
CCDC7-206ENST00000476558 CDC45O75419 566 aa28.48■■■□□ 2.15
CCDC7-206ENST00000476558 ERICH6Q7L0X2 663 aa28.48■■■□□ 2.15
CCDC7-206ENST00000476558 C22orf23Q9BZE7 217 aa28.47■■■□□ 2.15
CCDC7-206ENST00000476558 STAP2Q9UGK3 403 aa28.47■■■□□ 2.15
CCDC7-206ENST00000476558 TUBGCP6Q96RT7 1819 aa28.47■■■□□ 2.15
CCDC7-206ENST00000476558 TEX13AQ9BXU3 409 aaPredicted RBP28.46■■■□□ 2.15
CCDC7-206ENST00000476558 AFDNP55196 1824 aaKnown RBP28.46■■■□□ 2.15
CCDC7-206ENST00000476558 SDSP20132 328 aa28.45■■■□□ 2.14
CCDC7-206ENST00000476558 RHPN1Q8TCX5 695 aa28.45■■■□□ 2.14
CCDC7-206ENST00000476558 BCL11AQ9H165 835 aa28.45■■■□□ 2.14
CCDC7-206ENST00000476558 COL15A1P39059 1388 aa28.45■■■□□ 2.14
CCDC7-206ENST00000476558 HSP90AB4PQ58FF6 505 aa28.44■■■□□ 2.14
CCDC7-206ENST00000476558 BARGINQ6ZT62 677 aa28.44■■■□□ 2.14
CCDC7-206ENST00000476558 TTLL7Q6ZT98 887 aa28.43■■■□□ 2.14
CCDC7-206ENST00000476558 KIF1BPQ96EK5 621 aa28.43■■■□□ 2.14
CCDC7-206ENST00000476558 BICC1Q9H694 974 aaKnown RBP28.43■■■□□ 2.14
CCDC7-206ENST00000476558 MX1P20591 662 aa28.43■■■□□ 2.14
CCDC7-206ENST00000476558 RBM25P49756 843 aaKnown RBP28.42■■■□□ 2.14
CCDC7-206ENST00000476558 DDB1Q16531 1140 aa28.42■■■□□ 2.14
CCDC7-206ENST00000476558 ANP32EQ9BTT0 268 aa28.42■■■□□ 2.14
CCDC7-206ENST00000476558 JCADQ9P266 1359 aa28.42■■■□□ 2.14
CCDC7-206ENST00000476558 DOT1LQ8TEK3 1739 aa28.42■■■□□ 2.14
CCDC7-206ENST00000476558 DNAJC10Q8IXB1 793 aa28.41■■■□□ 2.14
CCDC7-206ENST00000476558 AOX1Q06278 1338 aa28.4■■■□□ 2.14
CCDC7-206ENST00000476558 CASP7P55210 303 aa28.39■■■□□ 2.14
CCDC7-206ENST00000476558 IL1RAPL2Q9NP60 686 aa28.39■■■□□ 2.14
CCDC7-206ENST00000476558 SLC4A9Q96Q91 983 aa28.39■■■□□ 2.13
CCDC7-206ENST00000476558 ATP5J2-PTCD1G3V325 749 aa28.38■■■□□ 2.13
CCDC7-206ENST00000476558 EPHA10Q5JZY3 1008 aa28.38■■■□□ 2.13
CCDC7-206ENST00000476558 UNC5CLQ8IV45 518 aa28.38■■■□□ 2.13
CCDC7-206ENST00000476558 SLC4A3P48751 1232 aa28.37■■■□□ 2.13
CCDC7-206ENST00000476558 PRIM1P49642 420 aaKnown RBP28.37■■■□□ 2.13
CCDC7-206ENST00000476558 MARCH10Q8NA82 808 aaPredicted RBP28.37■■■□□ 2.13
CCDC7-206ENST00000476558 BCL9LQ86UU0 1499 aa28.37■■■□□ 2.13
CCDC7-206ENST00000476558 EIF5BO60841 1220 aaKnown RBP28.36■■■□□ 2.13
CCDC7-206ENST00000476558 RBM42Q9BTD8 480 aaKnown RBP28.36■■■□□ 2.13
CCDC7-206ENST00000476558 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.36■■■□□ 2.13
CCDC7-206ENST00000476558 STARD3NLO95772 234 aa28.36■■■□□ 2.13
CCDC7-206ENST00000476558 RABL6Q3YEC7 729 aaPredicted RBP28.36■■■□□ 2.13
CCDC7-206ENST00000476558 TSHZ3Q63HK5 1081 aa28.35■■■□□ 2.13
CCDC7-206ENST00000476558 PA2G4Q9UQ80 394 aaKnown RBP28.35■■■□□ 2.13
CCDC7-206ENST00000476558 KAT6BQ8WYB5 2073 aa28.35■■■□□ 2.13
CCDC7-206ENST00000476558 TJP1Q07157 1748 aa28.34■■■□□ 2.13
CCDC7-206ENST00000476558 A0A087WZG4 1122 aa28.34■■■□□ 2.13
CCDC7-206ENST00000476558 H7C1W4 665 aa28.34■■■□□ 2.13
CCDC7-206ENST00000476558 ERC1Q8IUD2 1116 aa28.34■■■□□ 2.13
CCDC7-206ENST00000476558 UBE3BQ7Z3V4 1068 aa28.34■■■□□ 2.13
CCDC7-206ENST00000476558 CYP19A1P11511 503 aaPredicted RBP28.33■■■□□ 2.13
CCDC7-206ENST00000476558 DAXXQ9UER7 740 aaPredicted RBP28.33■■■□□ 2.13
CCDC7-206ENST00000476558 USP42Q9H9J4 1324 aaKnown RBP28.33■■■□□ 2.13
CCDC7-206ENST00000476558 VPS72Q15906 364 aa28.32■■■□□ 2.12
CCDC7-206ENST00000476558 NUTM1Q86Y26 1132 aa28.32■■■□□ 2.12
CCDC7-206ENST00000476558 SYTL4Q96C24 671 aaPredicted RBP28.32■■■□□ 2.12
CCDC7-206ENST00000476558 ZBTB3Q9H5J0 574 aa28.32■■■□□ 2.12
CCDC7-206ENST00000476558 FNBP4Q8N3X1 1017 aaPredicted RBP28.32■■■□□ 2.12
CCDC7-206ENST00000476558 CCDC191Q8NCU4 936 aa28.32■■■□□ 2.12
CCDC7-206ENST00000476558 CWC25Q9NXE8 425 aaPredicted RBP28.32■■■□□ 2.12
CCDC7-206ENST00000476558 JARID2Q92833 1246 aaPredicted RBP28.31■■■□□ 2.12
CCDC7-206ENST00000476558 CCDC9Q9Y3X0 531 aaKnown RBP28.31■■■□□ 2.12
CCDC7-206ENST00000476558 OS9Q13438 667 aaPredicted RBP28.3■■■□□ 2.12
CCDC7-206ENST00000476558 BECN1Q14457 450 aa28.3■■■□□ 2.12
CCDC7-206ENST00000476558 PI4K2BQ8TCG2 481 aa28.3■■■□□ 2.12
CCDC7-206ENST00000476558 ISCA1Q9BUE6 129 aa28.3■■■□□ 2.12
CCDC7-206ENST00000476558 SASH1O94885 1247 aa28.29■■■□□ 2.12
CCDC7-206ENST00000476558 RFX5P48382 616 aaPredicted RBP28.29■■■□□ 2.12
CCDC7-206ENST00000476558 NGLY1Q96IV0 654 aa28.29■■■□□ 2.12
CCDC7-206ENST00000476558 SPATA31A6Q5VVP1 1343 aa28.29■■■□□ 2.12
CCDC7-206ENST00000476558 TRIM28Q13263 835 aaKnown RBP28.29■■■□□ 2.12
CCDC7-206ENST00000476558 C8orf37Q96NL8 207 aa28.29■■■□□ 2.12
CCDC7-206ENST00000476558 KIF2CQ99661 725 aa28.29■■■□□ 2.12
CCDC7-206ENST00000476558 COPRSQ9NQ92 184 aa28.29■■■□□ 2.12
CCDC7-206ENST00000476558 TCIRG1Q13488 830 aa28.28■■■□□ 2.12
CCDC7-206ENST00000476558 CASC1Q6TDU7 716 aa28.28■■■□□ 2.12
CCDC7-206ENST00000476558 FOXO4P98177 505 aa28.27■■■□□ 2.12
CCDC7-206ENST00000476558 CLASRPQ8N2M8 674 aaKnown RBP28.27■■■□□ 2.12
CCDC7-206ENST00000476558 CERKQ8TCT0 537 aa28.27■■■□□ 2.12
CCDC7-206ENST00000476558 G3BP1Q13283 466 aaKnown RBP eCLIP28.27■■■□□ 2.12
CCDC7-206ENST00000476558 TBC1D2Q9BYX2 928 aa28.27■■■□□ 2.12
CCDC7-206ENST00000476558 TTC41PQ6P2S7 1318 aa28.26■■■□□ 2.11
CCDC7-206ENST00000476558 USP26Q9BXU7 913 aa28.26■■■□□ 2.11
CCDC7-206ENST00000476558 CICQ96RK0 1608 aaPredicted RBP28.26■■■□□ 2.11
CCDC7-206ENST00000476558 PTPN12Q05209 780 aaKnown RBP28.25■■■□□ 2.11
CCDC7-206ENST00000476558 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.25■■■□□ 2.11
CCDC7-206ENST00000476558 MAP3K15Q6ZN16 1313 aa28.24■■■□□ 2.11
CCDC7-206ENST00000476558 KIF6Q6ZMV9 814 aa28.24■■■□□ 2.11
CCDC7-206ENST00000476558 FAM98CQ17RN3 349 aaKnown RBP28.23■■■□□ 2.11
CCDC7-206ENST00000476558 KLHDC4Q8TBB5 520 aa28.23■■■□□ 2.11
CCDC7-206ENST00000476558 ACSBG1Q96GR2 724 aa28.23■■■□□ 2.11
CCDC7-206ENST00000476558 ZBTB1Q9Y2K1 713 aa28.22■■■□□ 2.11
CCDC7-206ENST00000476558 ERC2O15083 957 aa28.22■■■□□ 2.11
CCDC7-206ENST00000476558 CHMLP26374 656 aa28.22■■■□□ 2.11
CCDC7-206ENST00000476558 GIGYF2Q6Y7W6 1299 aaKnown RBP28.22■■■□□ 2.11
CCDC7-206ENST00000476558 LMBR1LQ6UX01 489 aa28.21■■■□□ 2.11
CCDC7-206ENST00000476558 TRIM6-TRIM34B2RNG4 842 aa28.2■■■□□ 2.11
CCDC7-206ENST00000476558 IL6STP40189 918 aaPredicted RBP28.2■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms