RNA–Protein interactions for RNA: ENST00000475835.2

LSM2-211, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 211 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-211ENST00000475835 TTC31Q49AM3 519 aaPredicted RBP4.52□□□□□ -1.69
LSM2-211ENST00000475835 CCDC184Q52MB2 194 aa4.52□□□□□ -1.69
LSM2-211ENST00000475835 PARP10Q53GL7 1025 aa4.52□□□□□ -1.69
LSM2-211ENST00000475835 CCDC80Q76M96 950 aa4.52□□□□□ -1.69
LSM2-211ENST00000475835 IFNLR1Q8IU57 520 aaPredicted RBP4.52□□□□□ -1.69
LSM2-211ENST00000475835 MYO1HQ8N1T3 1032 aa4.52□□□□□ -1.69
LSM2-211ENST00000475835 TXLNBQ8N3L3 684 aa4.52□□□□□ -1.69
LSM2-211ENST00000475835 ENOX1Q8TC92 643 aaKnown RBP4.52□□□□□ -1.69
LSM2-211ENST00000475835 GOLGA1Q92805 767 aa4.52□□□□□ -1.69
LSM2-211ENST00000475835 ZBTB10Q96DT7 871 aa4.52□□□□□ -1.69
LSM2-211ENST00000475835 CCDC34Q96HJ3 373 aa4.52□□□□□ -1.69
LSM2-211ENST00000475835 PLEKHG4BQ96PX9 1271 aa4.52□□□□□ -1.69
LSM2-211ENST00000475835 NAP1L4Q99733 375 aaKnown RBP4.52□□□□□ -1.69
LSM2-211ENST00000475835 TSPY26PQ9H489 355 aa4.52□□□□□ -1.69
LSM2-211ENST00000475835 EXOC1Q9NV70 894 aa4.52□□□□□ -1.69
LSM2-211ENST00000475835 SLAIN2Q9P270 581 aa4.52□□□□□ -1.69
LSM2-211ENST00000475835 CHPF2Q9P2E5 772 aa4.52□□□□□ -1.69
LSM2-211ENST00000475835 KLHL42Q9P2K6 505 aa4.52□□□□□ -1.69
LSM2-211ENST00000475835 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.52□□□□□ -1.69
LSM2-211ENST00000475835 IQSEC3Q9UPP2 1182 aaPredicted RBP4.52□□□□□ -1.69
LSM2-211ENST00000475835 ATP8A1Q9Y2Q0 1164 aa4.52□□□□□ -1.69
LSM2-211ENST00000475835 UGGT2Q9NYU1 1516 aa4.51□□□□□ -1.69
LSM2-211ENST00000475835 NESP48681 1621 aa4.51□□□□□ -1.69
LSM2-211ENST00000475835 F8VZ95 297 aa4.51□□□□□ -1.69
LSM2-211ENST00000475835 GIGYF1O75420 1035 aaPredicted RBP4.51□□□□□ -1.69
LSM2-211ENST00000475835 TPM1P09493 284 aa4.51□□□□□ -1.69
LSM2-211ENST00000475835 MYBL2P10244 700 aa4.51□□□□□ -1.69
LSM2-211ENST00000475835 XBP1P17861 261 aa4.51□□□□□ -1.69
LSM2-211ENST00000475835 HOXD10P28358 340 aa4.51□□□□□ -1.69
LSM2-211ENST00000475835 GJA8P48165 433 aa4.51□□□□□ -1.69
LSM2-211ENST00000475835 CLK1P49759 484 aaKnown RBP4.51□□□□□ -1.69
LSM2-211ENST00000475835 PDAP1Q13442 181 aaKnown RBP4.51□□□□□ -1.69
LSM2-211ENST00000475835 KRT77Q7Z794 578 aa4.51□□□□□ -1.69
LSM2-211ENST00000475835 SDCCAG8Q86SQ7 713 aaPredicted RBP4.51□□□□□ -1.69
LSM2-211ENST00000475835 NOP9Q86U38 636 aaKnown RBP4.51□□□□□ -1.69
LSM2-211ENST00000475835 ARHGEF25Q86VW2 580 aa4.51□□□□□ -1.69
LSM2-211ENST00000475835 LRRC49Q8IUZ0 686 aa4.51□□□□□ -1.69
LSM2-211ENST00000475835 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.51□□□□□ -1.69
LSM2-211ENST00000475835 FAM76AQ8TAV0 307 aa4.51□□□□□ -1.69
LSM2-211ENST00000475835 FRS2Q8WU20 508 aa4.51□□□□□ -1.69
LSM2-211ENST00000475835 DNAAF4Q8WXU2 420 aa4.51□□□□□ -1.69
LSM2-211ENST00000475835 ANKRD7Q92527 254 aa4.51□□□□□ -1.69
LSM2-211ENST00000475835 GPATCH3Q96I76 525 aa4.51□□□□□ -1.69
LSM2-211ENST00000475835 TTC14Q96N46 770 aa4.51□□□□□ -1.69
LSM2-211ENST00000475835 EPAS1Q99814 870 aa4.51□□□□□ -1.69
LSM2-211ENST00000475835 BAG1Q99933 345 aaPredicted RBP4.51□□□□□ -1.69
LSM2-211ENST00000475835 A1CFQ9NQ94 594 aaKnown RBP4.51□□□□□ -1.69
LSM2-211ENST00000475835 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.51□□□□□ -1.69
LSM2-211ENST00000475835 POGKQ9P215 609 aa4.51□□□□□ -1.69
LSM2-211ENST00000475835 RABL2BQ9UNT1 228 aa4.51□□□□□ -1.69
LSM2-211ENST00000475835 LZTS1Q9Y250 596 aa4.51□□□□□ -1.69
LSM2-211ENST00000475835 LAMC3Q9Y6N6 1575 aa4.51□□□□□ -1.69
LSM2-211ENST00000475835 BRD4O60885 1362 aaPredicted RBP4.51□□□□□ -1.69
LSM2-211ENST00000475835 TOPBP1Q92547 1522 aa4.51□□□□□ -1.69
LSM2-211ENST00000475835 ITSN2Q9NZM3 1697 aa4.51□□□□□ -1.69
LSM2-211ENST00000475835 POLA1P09884 1462 aaPredicted RBP4.5□□□□□ -1.69
LSM2-211ENST00000475835 GRIN2BQ13224 1484 aa4.5□□□□□ -1.69
LSM2-211ENST00000475835 YEATS2Q9ULM3 1422 aa4.5□□□□□ -1.69
LSM2-211ENST00000475835 hCG_2014768A0A024R1R8 64 aa4.5□□□□□ -1.69
LSM2-211ENST00000475835 FAM25EA8MYX2 175 aa4.5□□□□□ -1.69
LSM2-211ENST00000475835 H7C1W4 665 aa4.5□□□□□ -1.69
LSM2-211ENST00000475835 KIAA0754O94854 1291 aa4.5□□□□□ -1.69
LSM2-211ENST00000475835 SNUPNO95149 360 aaKnown RBP4.5□□□□□ -1.69
LSM2-211ENST00000475835 SMC2O95347 1197 aa4.5□□□□□ -1.69
LSM2-211ENST00000475835 CPP00450 1065 aa4.5□□□□□ -1.69
LSM2-211ENST00000475835 PDE4AP27815 886 aa4.5□□□□□ -1.69
LSM2-211ENST00000475835 HOXA10P31260 410 aaPredicted RBP4.5□□□□□ -1.69
LSM2-211ENST00000475835 CYP2C19P33261 490 aa4.5□□□□□ -1.69
LSM2-211ENST00000475835 NF2P35240 595 aa4.5□□□□□ -1.69
LSM2-211ENST00000475835 NASPP49321 788 aaPredicted RBP4.5□□□□□ -1.69
LSM2-211ENST00000475835 VASPP50552 380 aaPredicted RBP4.5□□□□□ -1.69
LSM2-211ENST00000475835 FAM161AQ3B820 660 aa4.5□□□□□ -1.69
LSM2-211ENST00000475835 EFCAB2Q5VUJ9 269 aa4.5□□□□□ -1.69
LSM2-211ENST00000475835 TTC19Q6DKK2 380 aaPredicted RBP4.5□□□□□ -1.69
LSM2-211ENST00000475835 KCNV1Q6PIU1 500 aa4.5□□□□□ -1.69
LSM2-211ENST00000475835 SYNE3Q6ZMZ3 975 aa4.5□□□□□ -1.69
LSM2-211ENST00000475835 MMS22LQ6ZRQ5 1243 aa4.5□□□□□ -1.69
LSM2-211ENST00000475835 CCDC186Q7Z3E2 898 aa4.5□□□□□ -1.69
LSM2-211ENST00000475835 SPATS2Q86XZ4 545 aaKnown RBP4.5□□□□□ -1.69
LSM2-211ENST00000475835 MYLK4Q86YV6 388 aaPredicted RBP4.5□□□□□ -1.69
LSM2-211ENST00000475835 TRIM42Q8IWZ5 723 aa4.5□□□□□ -1.69
LSM2-211ENST00000475835 TEX11Q8IYF3 940 aa4.5□□□□□ -1.69
LSM2-211ENST00000475835 KRT222Q8N1A0 295 aa4.5□□□□□ -1.69
LSM2-211ENST00000475835 MICALL1Q8N3F8 863 aa4.5□□□□□ -1.69
LSM2-211ENST00000475835 RNF214Q8ND24 703 aa4.5□□□□□ -1.69
LSM2-211ENST00000475835 PPM1EQ8WY54 764 aa4.5□□□□□ -1.69
LSM2-211ENST00000475835 JAKMIP2Q96AA8 810 aa4.5□□□□□ -1.69
LSM2-211ENST00000475835 VTI1AQ96AJ9 217 aa4.5□□□□□ -1.69
LSM2-211ENST00000475835 BICD1Q96G01 975 aa4.5□□□□□ -1.69
LSM2-211ENST00000475835 RSRC1Q96IZ7 334 aaKnown RBP4.5□□□□□ -1.69
LSM2-211ENST00000475835 NEUROD6Q96NK8 337 aa4.5□□□□□ -1.69
LSM2-211ENST00000475835 UIMC1Q96RL1 719 aa4.5□□□□□ -1.69
LSM2-211ENST00000475835 RBSNQ9H1K0 784 aa4.5□□□□□ -1.69
LSM2-211ENST00000475835 INCENPQ9NQS7 918 aa4.5□□□□□ -1.69
LSM2-211ENST00000475835 DIAPH3Q9NSV4 1193 aa4.5□□□□□ -1.69
LSM2-211ENST00000475835 COMMD8Q9NX08 183 aa4.5□□□□□ -1.69
LSM2-211ENST00000475835 PPP1R1BQ9UD71 204 aaPredicted RBP4.5□□□□□ -1.69
LSM2-211ENST00000475835 ITGB1BP2Q9UKP3 347 aa4.5□□□□□ -1.69
LSM2-211ENST00000475835 TMCC3Q9ULS5 477 aa4.5□□□□□ -1.69
LSM2-211ENST00000475835 MAFFQ9ULX9 164 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms