RNA–Protein interactions for RNA: ENST00000474273.5

SSB-210, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-210ENST00000474273 LRRC69Q6ZNQ3 347 aa9.59□□□□□ -0.87
SSB-210ENST00000474273 TNFRSF25Q93038 417 aa9.59□□□□□ -0.87
SSB-210ENST00000474273 ZNF358Q9NW07 568 aa9.59□□□□□ -0.87
SSB-210ENST00000474273 NOD1Q9Y239 953 aa9.59□□□□□ -0.87
SSB-210ENST00000474273 M0R082 166 aa9.58□□□□□ -0.88
SSB-210ENST00000474273 NOS2P35228 1153 aa9.58□□□□□ -0.88
SSB-210ENST00000474273 GTF2IP78347 998 aa9.58□□□□□ -0.88
SSB-210ENST00000474273 ZNF417Q8TAU3 575 aa9.58□□□□□ -0.88
SSB-210ENST00000474273 ZNF587Q96SQ5 575 aaPredicted RBP9.58□□□□□ -0.88
SSB-210ENST00000474273 LZTS3O60299 673 aaPredicted RBP9.57□□□□□ -0.88
SSB-210ENST00000474273 EPHA4P54764 986 aa9.57□□□□□ -0.88
SSB-210ENST00000474273 FOXD4L6Q3SYB3 417 aaPredicted RBP9.57□□□□□ -0.88
SSB-210ENST00000474273 FOXD4L3Q6VB84 417 aaPredicted RBP9.57□□□□□ -0.88
SSB-210ENST00000474273 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.57□□□□□ -0.88
SSB-210ENST00000474273 C7orf43Q8WVR3 580 aa9.57□□□□□ -0.88
SSB-210ENST00000474273 NACC1Q96RE7 527 aa9.57□□□□□ -0.88
SSB-210ENST00000474273 STARD13Q9Y3M8 1113 aa9.57□□□□□ -0.88
SSB-210ENST00000474273 DYRK3O43781 588 aa9.56□□□□□ -0.88
SSB-210ENST00000474273 PSME1Q06323 249 aa9.56□□□□□ -0.88
SSB-210ENST00000474273 SFSWAPQ12872 951 aaKnown RBP9.56□□□□□ -0.88
SSB-210ENST00000474273 SLC9A9Q8IVB4 645 aa9.56□□□□□ -0.88
SSB-210ENST00000474273 SLC30A3Q99726 388 aa9.56□□□□□ -0.88
SSB-210ENST00000474273 NEUROD4Q9HD90 331 aa9.56□□□□□ -0.88
SSB-210ENST00000474273 SCO2A0A1W2PP80 73 aa9.55□□□□□ -0.88
SSB-210ENST00000474273 FAM229AH3BQW9 127 aa9.55□□□□□ -0.88
SSB-210ENST00000474273 ALBP02768 609 aa9.55□□□□□ -0.88
SSB-210ENST00000474273 SKIP12755 728 aa9.55□□□□□ -0.88
SSB-210ENST00000474273 TRIM28Q13263 835 aaKnown RBP9.55□□□□□ -0.88
SSB-210ENST00000474273 MICALL1Q8N3F8 863 aa9.55□□□□□ -0.88
SSB-210ENST00000474273 KRTAP9-6A0A140TA67 174 aa9.54□□□□□ -0.88
SSB-210ENST00000474273 NFATC2IPQ8NCF5 419 aa9.54□□□□□ -0.88
SSB-210ENST00000474273 ZNF232Q9UNY5 417 aa9.54□□□□□ -0.88
SSB-210ENST00000474273 NID1P14543 1247 aa9.53□□□□□ -0.88
SSB-210ENST00000474273 ADH7P40394 386 aa9.53□□□□□ -0.88
SSB-210ENST00000474273 SPEM2Q0P670 501 aa9.53□□□□□ -0.88
SSB-210ENST00000474273 NEUROD1Q13562 356 aa9.53□□□□□ -0.88
SSB-210ENST00000474273 NCOA4Q13772 614 aa9.53□□□□□ -0.88
SSB-210ENST00000474273 C8orf86Q6ZUL3 223 aa9.53□□□□□ -0.88
SSB-210ENST00000474273 SERTM1A2A2V5 107 aa9.52□□□□□ -0.89
SSB-210ENST00000474273 TBCELQ5QJ74 424 aa9.52□□□□□ -0.89
SSB-210ENST00000474273 TNS4Q8IZW8 715 aa9.52□□□□□ -0.89
SSB-210ENST00000474273 RHPN1Q8TCX5 695 aa9.52□□□□□ -0.89
SSB-210ENST00000474273 GRIK4Q16099 956 aa9.51□□□□□ -0.89
SSB-210ENST00000474273 ARTNQ5T4W7 220 aa9.51□□□□□ -0.89
SSB-210ENST00000474273 SH3PXD2AQ5TCZ1 1133 aa9.51□□□□□ -0.89
SSB-210ENST00000474273 C20orf204Q6ZNR8 217 aa9.51□□□□□ -0.89
SSB-210ENST00000474273 MCM6Q14566 821 aa9.5□□□□□ -0.89
SSB-210ENST00000474273 ALG2Q9H553 416 aa9.5□□□□□ -0.89
SSB-210ENST00000474273 ZFP64Q9NPA5 681 aa9.5□□□□□ -0.89
SSB-210ENST00000474273 BRD7Q9NPI1 651 aa9.5□□□□□ -0.89
SSB-210ENST00000474273 KCNQ4P56696 695 aa9.49□□□□□ -0.89
SSB-210ENST00000474273 PRSS36Q5K4E3 855 aa9.49□□□□□ -0.89
SSB-210ENST00000474273 C1orf53Q5VUE5 145 aa9.49□□□□□ -0.89
SSB-210ENST00000474273 RAB44Q7Z6P3 723 aaPredicted RBP9.49□□□□□ -0.89
SSB-210ENST00000474273 C9orf172C9J069 976 aa9.48□□□□□ -0.89
SSB-210ENST00000474273 CEP63Q96MT8 703 aa9.48□□□□□ -0.89
SSB-210ENST00000474273 USP17L5A8MUK1 530 aa9.47□□□□□ -0.89
SSB-210ENST00000474273 HIRAP54198 1017 aaPredicted RBP9.47□□□□□ -0.89
SSB-210ENST00000474273 PSMA6P60900 246 aaKnown RBP9.47□□□□□ -0.89
SSB-210ENST00000474273 POTEAQ6S8J7 498 aa9.47□□□□□ -0.89
SSB-210ENST00000474273 TRIM50Q86XT4 487 aa9.47□□□□□ -0.89
SSB-210ENST00000474273 HSH2DQ96JZ2 352 aa9.47□□□□□ -0.89
SSB-210ENST00000474273 ANKIB1Q9P2G1 1089 aa9.47□□□□□ -0.89
SSB-210ENST00000474273 COG6Q9Y2V7 657 aa9.47□□□□□ -0.89
SSB-210ENST00000474273 LILRB5O75023 590 aa9.46□□□□□ -0.9
SSB-210ENST00000474273 H2AFB1P0C5Y9 115 aa9.46□□□□□ -0.9
SSB-210ENST00000474273 H2AFB2P0C5Z0 115 aa9.46□□□□□ -0.9
SSB-210ENST00000474273 TYRO3Q06418 890 aa9.46□□□□□ -0.9
SSB-210ENST00000474273 ADGRE1Q14246 886 aa9.46□□□□□ -0.9
SSB-210ENST00000474273 TRAPPC3LQ5T215 181 aa9.46□□□□□ -0.9
SSB-210ENST00000474273 DEPDC4Q8N2C3 294 aa9.46□□□□□ -0.9
SSB-210ENST00000474273 KCNH4Q9UQ05 1017 aa9.46□□□□□ -0.9
SSB-210ENST00000474273 MBTPS1Q14703 1052 aa9.45□□□□□ -0.9
SSB-210ENST00000474273 TPCN2Q8NHX9 752 aa9.45□□□□□ -0.9
SSB-210ENST00000474273 PHACTR1Q9C0D0 580 aa9.45□□□□□ -0.9
SSB-210ENST00000474273 CHMP3Q9Y3E7 222 aa9.45□□□□□ -0.9
SSB-210ENST00000474273 SFI1A8K8P3 1242 aa9.44□□□□□ -0.9
SSB-210ENST00000474273 ELNP15502 786 aa9.44□□□□□ -0.9
SSB-210ENST00000474273 SELPP16109 830 aa9.44□□□□□ -0.9
SSB-210ENST00000474273 TSPAN10Q9H1Z9 355 aaPredicted RBP9.44□□□□□ -0.9
SSB-210ENST00000474273 HCN4Q9Y3Q4 1203 aa9.44□□□□□ -0.9
SSB-210ENST00000474273 A0A0A0MRY4 1105 aa9.43□□□□□ -0.9
SSB-210ENST00000474273 ZBTB7BO15156 539 aaPredicted RBP9.43□□□□□ -0.9
SSB-210ENST00000474273 SUSD3Q96L08 255 aa9.43□□□□□ -0.9
SSB-210ENST00000474273 KIAA1024Q9UPX6 916 aa9.43□□□□□ -0.9
SSB-210ENST00000474273 ATP1A2P50993 1020 aa9.42□□□□□ -0.9
SSB-210ENST00000474273 CCDC102BQ68D86 513 aa9.42□□□□□ -0.9
SSB-210ENST00000474273 TXNRD3Q86VQ6 643 aa9.42□□□□□ -0.9
SSB-210ENST00000474273 ZNF280CQ8ND82 737 aa9.42□□□□□ -0.9
SSB-210ENST00000474273 BHMTQ93088 406 aa9.42□□□□□ -0.9
SSB-210ENST00000474273 LENG1Q96BZ8 264 aaPredicted RBP9.42□□□□□ -0.9
SSB-210ENST00000474273 M0R2N6 131 aa9.41□□□□□ -0.9
SSB-210ENST00000474273 RAC1P63000 192 aa9.41□□□□□ -0.9
SSB-210ENST00000474273 NRG1Q02297 640 aaPredicted RBP9.41□□□□□ -0.9
SSB-210ENST00000474273 NBPF11Q86T75 865 aa9.41□□□□□ -0.9
SSB-210ENST00000474273 PLEKHM2Q8IWE5 1019 aa9.41□□□□□ -0.9
SSB-210ENST00000474273 WWC1Q8IX03 1113 aa9.41□□□□□ -0.9
SSB-210ENST00000474273 UBE2OQ9C0C9 1292 aaKnown RBP9.41□□□□□ -0.9
SSB-210ENST00000474273 SLC6A14Q9UN76 642 aa9.41□□□□□ -0.9
SSB-210ENST00000474273 LRP8Q14114 963 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms